Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste4g03080 | AAAAGATACTGTTTCTCCTGCATATCCTCCTGTGGGTGTTTAGAAGCTGATGAAGTTGATAATGAAGAGTCCATCTACCTCTCCCTTGCCCCTCCTACCCACCTCAAAACCAAGCCCTCTAACTCACAACACTCTTCTACTATGCCTCATCACCATCACCCCGCTGCTGTAACTGTTGCCCTCCACATTGGTCTTCCCTCCAACACGCCTTCCACTCCATATTGGATCCCTACTCCTCAACAAATCCTCCTTGGACCCACCCAATTTTCTTGCACTGTCTGTAACAAAACTTTTAACCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGATCACAGTATAGGAAAGGTGCGGAGTCACTGAGAGGGTCAAAAGGAAATTCTTCAATGATGAGGGTACCCTGCTATTGCTGTGAAGAGGGTTGCAAAAACAACATAAACTATCCAAGGTCAAGGCCACTGAAAGATTTCAGGACCCTCCAGACACACTATAAGAGGAAGCACGGAGGGAAGCCATTCGAGTGCAGGAAGTGTCACAAGGCATTTGCAGTGAGAGGGGATTGGAGAACACACGAGAAGAATTGTGGGAAGCTTTGGTTCTGCGTCTGTGGTTCTGATTTTAAGCACAAGAGATCCCTTAAGGATCATGTTCGTGCATTCGGTAATGGCCATGCTGCACACATCTTGAGTGAAGATGACAGTGAAGTGGTTCTTGGTACTTTCAAATGA | 732 | 0.4645 | KRYCFSCISSCGCLEADEVDNEESIYLSLAPPTHLKTKPSNSQHSSTMPHHHHPAAVTVALHIGLPSNTPSTPYWIPTPQQILLGPTQFSCTVCNKTFNRFNNMQMHMWGHGSQYRKGAESLRGSKGNSSMMRVPCYCCEEGCKNNINYPRSRPLKDFRTLQTHYKRKHGGKPFECRKCHKAFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGNGHAAHILSEDDSEVVLGTFK | 243 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste4g03080 | 243 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 91 | 111 | IPR013087 | - | |
Pste4g03080 | 243 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 89 | 116 | IPR013087 | - | |
Pste4g03080 | 243 | Gene3D | Classic Zinc Finger | 88 | 111 | - | - | |
Pste4g03080 | 243 | SMART | c2h2final6 | 137 | 169 | IPR013087 | - | |
Pste4g03080 | 243 | SMART | c2h2final6 | 174 | 194 | IPR013087 | - | |
Pste4g03080 | 243 | SMART | c2h2final6 | 89 | 111 | IPR013087 | - | |
Pste4g03080 | 243 | FunFam | Zinc finger protein WIP2 | 143 | 225 | - | - | |
Pste4g03080 | 243 | MobiDBLite | consensus disorder prediction | 34 | 49 | - | - | |
Pste4g03080 | 243 | Gene3D | Classic Zinc Finger | 112 | 199 | - | - | |
Pste4g03080 | 243 | MobiDBLite | consensus disorder prediction | 32 | 51 | - | - | |
Pste4g03080 | 243 | PANTHER | ZINC FINGER PROTEIN WIP2 | 22 | 230 | IPR043584 | GO:0003700|GO:0010468 | |
Pste4g03080 | 243 | SUPERFAMILY | beta-beta-alpha zinc fingers | 89 | 194 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste4g03080 | Pste-Chr4 | 22352520 | 22353644 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste4g03080 | 21 | 232 | C2H2 Transcription Factor Family | AT1G13290 | 67.797 | 1.76e-112 | 323 |