Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03079 GTTTGGGTTGCGTCGATGGCTTCGTCTTCCTCCGATCCTGGCAAGTCCGACGCTGGCGGCGGCGGTTCGGAGACTCCGGAAGCAACGACGGCGGCGAACGATGAACTGTTGTCGGTGGTGAAGAAAGCGAAGAAAGAGAGAATGTGCACTGCCAAAGAGAGAATTAGTAAAATGCCTCCTTGTGCTGCTGGCAAACGCAGCTCTATATATCGCGGAGTCACCAGGCATAGATGGACTGGTCGTTATGAAGCACATCTTTGGGATAAAAGTACATGGAATCAGAATCAGAATAAGAAAGGAAAGCAAGGGGCGTATGATGATGAAGAGGCAGCAGCTAGAGCATACGACCTCGCTGCTCTGAAATATTGGGGTCCGAGTGCTCTCATAAACTTTCCAGTGACAGATTATGCAAGAGATCTTGAAGAAATGCAGAATGTATCGAAAGAGGAATACTTAGTATCTTTACGAAGGAAGAGCAGTGGTTTTTCAAGAGGTCTATCCAAATACCGTGGACTCTCCAGTCGATGGGAGCCGACATACGGTCGTATGGCTGGATCTGACTACTTCAATAGTATATATTATGGTGAAGATTCAGCTTCAGAAACCAAATATCTTAGTTTCTGCATAGAAAGAAAGATTGATTTAACAAGTTACATCAAATGGTGGGGGTCAAATAAAAGTCGACAACCTGATTCTGGAGTAAGATTTTCTGATGTTAAAAAGCATGGTTTTACTGGAGATATTTGCGTTGAACTCAAAACATTTCAAGAAAAAGGCCATCCTTCAGAACCATACCAGTTGCCAGTGTTAGGCTTGTCCAGTGAAAGGAGGAAACATGAGCATTCTTCAGTCTCTGCTTCAAGTATCTTGTCACATTCAGCTGCTTACAAGAACTTGCAGCTGAAAGCATCAAAGAAACAGGAAAATAGCAATGATAATGATGAGAATGAAAATAAGAATAGCATCAGTAAGTTGGACCATGGCAAGGCAGCAGAGAAACTGTCGAATAATGATGGTGGCAATGAAGGACTTGACATTGCTATGGGAATAAGTGGATCACTGCCTCTTCAAAGAAGTGTTTTCCCACTGACATCATTATTATCTGCTCCATTTTTGACAGCATACAATACTGTTGACCCGTCAGTAGATACTGTTCTCTGGACACCACAGGTTCCTATACTGTCTGTTGGCCTTTCCAGTGTGGCTGAGGTTTCCAAAACAGAGACCAGTTCAACGTACACCATTTTTCAGTCTGACGAGTGATTAGGTTTTGAATTTCTGAGTTGGAACTTGGAAAACGACAAGTTTTGAAGAGCTGAGCTTGTATTTAACAACTGCCTTTGAACTTTGATGTGCATGTGCTCAGCTAATTTGGACTATACCTGTATCATATTACATGGATTGTAGAAATCAGAGTAAAATAAATGAGTTTAATACTTATGTTGTAGCGGTGTAAAAAAGTTTTACCACATTCCATCATAATTCTT 1487 0.419 VWVASMASSSSDPGKSDAGGGGSETPEATTAANDELLSVVKKAKKERMCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPSALINFPVTDYARDLEEMQNVSKEEYLVSLRRKSSGFSRGLSKYRGLSSRWEPTYGRMAGSDYFNSIYYGEDSASETKYLSFCIERKIDLTSYIKWWGSNKSRQPDSGVRFSDVKKHGFTGDICVELKTFQEKGHPSEPYQLPVLGLSSERRKHEHSSVSASSILSHSAAYKNLQLKASKKQENSNDNDENENKNSISKLDHGKAAEKLSNNDGGNEGLDIAMGISGSLPLQRSVFPLTSLLSAPFLTAYNTVDPSVDTVLWTPQVPILSVGLSSVAEVSKTETSSTYTIFQSDE 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03079 420 MobiDBLite consensus disorder prediction 304 337 - -
Pste4g03079 420 MobiDBLite consensus disorder prediction 1 36 - -
Pste4g03079 420 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 33 316 - -
Pste4g03079 420 MobiDBLite consensus disorder prediction 307 333 - -
Pste4g03079 420 Pfam AP2 domain 69 124 IPR001471 GO:0003700|GO:0006355
Pste4g03079 420 SUPERFAMILY DNA-binding domain 68 133 IPR016177 GO:0003677
Pste4g03079 420 MobiDBLite consensus disorder prediction 1 16 - -
Pste4g03079 420 FunFam AP2-like ethylene-responsive transcription factor 68 134 - -
Pste4g03079 420 ProSiteProfiles AP2/ERF domain profile. 69 132 IPR001471 GO:0003700|GO:0006355
Pste4g03079 420 PRINTS Ethylene responsive element binding protein signature 114 134 IPR001471 GO:0003700|GO:0006355
Pste4g03079 420 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Pste4g03079 420 Gene3D AP2/ERF domain 69 134 IPR036955 GO:0003700|GO:0006355
Pste4g03079 420 SMART rav1_2 69 138 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03079 Pste-Chr4 22351732 22358502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03079 29 416 AP2-EREBP Transcription Factor Family AT2G41710 58.881 1.04e-142 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste4g03079 AP2 2.1e-09 CL0081