Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03070 GCACAATAATGCATCAAACACCCATTCTCAATCTCTTCTTTTGTTGTATTTTGACTAAGTAACAAAGCAAATCACAACAGAGAATTGTGATGAAGAATCATGTGTCTCACAACCTCTTCCTCTTTCCCCTTTTGCTGCTTGCTTTTGTTGAATCATATGCTGCAAAGGCAAAGTGTCCACCCTCCTTTGTTTGTGGCAACCTTGGCACAATGCATTTCCCTTACACTGACACCAAACACCCTCAGTGTGGCTTGTTGGTGATACATGGTTGTGATGATCGTGACCCAGATGCAATCAAAACCATAAAAAACAAAGGAGAATGGTTTTACATTACACGTGAGGAGGATGACACCATTTTGTTCAGAGATGATGAACTTCGCACCAACTTGCTGACCAAAAGATGCAACAGCACCCTCAATGTTACCTCTTCTTCAGCCTTTAGAAAAACTACCATATGTAATGATGATATTTTCTATGGCACTGCTACTGTGGATGATGATGAGTATAATTATCCTTATTTTGAAGCATGTTCGAGGGTTCTTCTTCCAATAAGAGATGCAGGGCTTGTTCCTGGACCCAGTGGAAATCTGTTTGACTATGTATCAGCTGATATTCCCGTCACAACAGATGTATCTCATGATTGTTCTTCTTGTTACTATCTTAGAGGAGGCCAGTGTCAACTAGACAGCCAAGGGAAGTTCTTTTGTGCACAAGAGAAAACCAGCAAGAAGGTGAAGATAGTAATAGCTACAGCTACTTCAGTTGGAGGAGCACTAGGAGTTTTGATGGTCTTGGCTTGCATCTTTCGAAGATACTATTGCCACAAGCAGAATCCAGCTTACATAATGATAGAGAATTTTCTGAAGCAACATGGACATCTTTCAGCCAAAAGGTACAGTTATTTGGAGGTAAAGAAAATGACCAACTCCTTCAAGAACAAATTAGGCCAAGGAGGGTTTGGTAGTGTATACAAAGGGAGGTTACAAAATGGAAGTCTTGTGGCAGTGAAGATTTTGAGTAACTTAAAAGGTGATGGAGAAGAATTCATCAATGAAGTTGCTAGTATTAGCATGACTTCTCATGTTAACATTGTCAGTTTACTGGGATTTTGCCTAGAAGGCTCCAAAAGAGTTCTCATATATGAGTACATGCCCAATGGATCTCTTGAAAAGTTCATATATGAAGAGAAAGATTCATCAAGGCTTAAACTCACATTGAATTGCAGAACTATGTACAATATTGCCATTGGTGTTGCTAGAGGATTGGAGTATTTGCACAAGGGTTGTAACACCAAAATCTTGCATTTTGATATAAAACCTCATAATATACTGCTAGATGAGTTGTTTTGCCCCAAAATATCAGATTTCGGGCTTGCTAAAATATGTCCAAGAGAAATAAGTATTGTATCAATGATGGTTGCAAGGGGAACTGTAGGGTATATTGCTCCTGAATTGTTCTGCAGAAATTTTGGTGGGGTGTCACATAAATCAGATGTCTATAGTTATGGAATGATGGTCTTGGAAATGCTTGGTGCTAGAGAGAATAATAATGACAGAGATGATTTTCCAAGTGAAAACTACTTTCCACATTGGATTTACAACCATCTTGAGTTAAACAAAGAGTTTCAATGGAGATGTGTTAAAAACCAAAATGATGAAGAAATGGTGAGAAAAATGACTATAGTGAGTTTGTGGTGCATACAAACGGACCCTTCAAGTCGACCTGCAATGAGTAAAGTGGTGGAGATGATGGAAGGAAGCATTAGCTTGTTGCAAGTTCCACCTAAACCTTTCATTTTTTCATCCTCAGCCCCTGAATCACAATCAAGTGAGACTTCATACTTATTGAAATAG 1853 0.388 MKNHVSHNLFLFPLLLLAFVESYAAKAKCPPSFVCGNLGTMHFPYTDTKHPQCGLLVIHGCDDRDPDAIKTIKNKGEWFYITREEDDTILFRDDELRTNLLTKRCNSTLNVTSSSAFRKTTICNDDIFYGTATVDDDEYNYPYFEACSRVLLPIRDAGLVPGPSGNLFDYVSADIPVTTDVSHDCSSCYYLRGGQCQLDSQGKFFCAQEKTSKKVKIVIATATSVGGALGVLMVLACIFRRYYCHKQNPAYIMIENFLKQHGHLSAKRYSYLEVKKMTNSFKNKLGQGGFGSVYKGRLQNGSLVAVKILSNLKGDGEEFINEVASISMTSHVNIVSLLGFCLEGSKRVLIYEYMPNGSLEKFIYEEKDSSRLKLTLNCRTMYNIAIGVARGLEYLHKGCNTKILHFDIKPHNILLDELFCPKISDFGLAKICPREISIVSMMVARGTVGYIAPELFCRNFGGVSHKSDVYSYGMMVLEMLGARENNNDRDDFPSENYFPHWIYNHLELNKEFQWRCVKNQNDEEMVRKMTIVSLWCIQTDPSSRPAMSKVVEMMEGSISLLQVPPKPFIFSSSAPESQSSETSYLLK 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03070 587 Gene3D Phosphorylase Kinase; domain 1 255 353 - -
Pste4g03070 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Pste4g03070 587 PANTHER RUST RESISTANCE KINASE LR10-RELATED 253 575 IPR045874 GO:0004672
Pste4g03070 587 Pfam Protein kinase domain 282 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03070 587 FunFam serine/threonine-protein kinase PBS1-like 253 353 - -
Pste4g03070 587 Gene3D Transferase(Phosphotransferase) domain 1 354 561 - -
Pste4g03070 587 SMART serkin_6 279 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03070 587 ProSiteProfiles Protein kinase domain profile. 279 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03070 587 ProSitePatterns Protein kinases ATP-binding region signature. 285 307 IPR017441 GO:0005524
Pste4g03070 587 FunFam PR5-like receptor kinase 354 566 - -
Pste4g03070 587 SUPERFAMILY Protein kinase-like (PK-like) 262 554 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03070 Pste-Chr4 22220903 22223812 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03070 9 583 Receptor kinase-like Gene Family AT5G38260 40.095 9.71e-131 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pste4g03070 Pkinase 1e-45 CL0016