Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03060 TAATGGCTGAATCACTTCTTTTTGGCTTAACAGAATCACTGATAGGGAAGCTTGCTTCAGTTGCCATTAAGGAAGCTTCTTTGGCGCTTGGTGTATATAAAGATCTGGAAGAGATGAAAGGTATACGACATTTCTTCTCAACTAGTAACCCTCTTGTGTATCGTCTTAGAATGGCACGTCAGATCAAAGACTTTAGGGAGAGATTGGATAAAGTTGCAGCTGACCGGCTCAACTTTGGCCTTGCAATAAAAAAAATGACACACGAACCGACTTATTCATGTGTAAACCCTTCAAATGTTATTGGAAGGGAACATGATAAAAAGAAAATAATAGAACTTTTGAAGAAAGATGGCCATAACAAAAGTCTTTCTGTTGTTCCCATTGTGGGATTCGAAGGCTTGGGAAAGACCACTCTTGCAAAATTGGTGTTCAATGATACCGACATTGACCAATATTTCTCGTTGAAGATGTGGGTGTGTATCTCTAATGATTTTAAACTTAAAAATATCCTTGTTCAAATCCTCAAATGTGTTCCGAATCAAGATAATGTAAACTTTGAAAAGTGCGAAACAGAACAACTTCAAAATCGTTTGAGAAATGCACTTCAACATCATAAATTCTTGCTGGTGTTGGATGATGTGTGGAACGAGGAACGTGATCTCTGGGGTGATTTGAGGGATATACTAGATGTAGGTGTTGAAGGGAGTAAAGTGCTAGTGACCACTCATATCGACACAATAGCTAGCATGATGCAGCCTGAACCCTCTCACTGTTACTCTCTACCGGGCCTTTCTCCAAAGGATTCCTTCTCTATTTTTGTCAAATGTGCTTTTGAAGAAGGAGAGGAGAAAAAACATCCACAACTATTGGAGATTGGGGAAGAAATTGTGAGAAAATGCAAAGGGATACCATTGGCTGTGAAAACATTAGGAAGTTCACTATTTTCAAAGTTTGATGAAGGAGAGTGGAAGTCAGTAAGAGACAGTGCAATTTGGAATTTACAACAAAAAGAAAGAGACATTATGCCCATTCTTCAATTTAGTTACGATCGATTGCCTTCATATTTGAAACCATGTTTTGGATGCCTGTCCCTTTTCCCTGAGGACTTTTATATTCAAAGTTTTTATGTTTCTGTAATGTGGGACGCACTTTGTTTTCTTCAACCACCAAGAGAAAGTGAAACAGTGAATGGTGTTAGCAATCGATATTTGCGTGAGCTACTCTCAAGGTCTTTTCTTACAGATTTTATTGACTTGGACCTTTATTGCTTTTTTAAGTTACATGATTTAGTGCGTGATCATGCAACGTACATTGCCAAAGGTGAGTTCCAAATAATATATACATGCATTCCAGATGAATTTAAGGAAGCAAAACATTTGGCATTCATGGAAAATGATTTGCTTGGCCAAGAAGCCACTAATGAAGCTTTCTTGAATAGATTGGTCTCAACATGCAAATACTTAACAATTTTAGACTTAAGTCGTTCTAAATATGAGAATTTGCCTCGTTCCATTGGAAACTTGAAATTTCTAAGATACCTGTGTCTTTTGTATAGTGCAAATCTTAAGAGTCTCCCAGATTCTTTGTGCAAACTGCAAAGTTTACAATCTCTGAACCTCTATGGATGCATTGAGCTACAAAAATTGTCCAAGGGTATAAGAGCACTAATCAGCCTTCGTCACCTCCTTATAACCACAAGGCAGGCTGATGTTAATTTTCCAGAGAAAGAAATTGCAAATATGACTTTAGAAACTTTGGAATTTTGCCGTTGTGATAATTTGGAGGAGTTGTTTAAAGGGGTGCAACATTTTAATCTTAAATCTCTACTTTTTTCTAAATGTGAGAGTCTGAGGAAATTTTCATTTCATGTCTTGAGAAGTTTAGAGAGTTTGGCTATTACGGAATGCAGTATGTTGGATTTGTCATTGGGACTTGGCAACCAAATTCCCCTCTCATGCTTGAAGTTACTTCATCTTTGTTCTTTGCCACAATTGGTCACTTTGCCTATGTGGTTGCAAGGATCTTCAAACACATTAAATACTTTGGTAATTATTGACTGCTTCAATCTTGAGCATCTTCCAGAATGGTTATCAACTATGACATCCCTCAGACAGCTCAGAATTGTATTTTGTCCAAAGTTGCTCACACTCCCAGACTGCTTCAATCTTGAACGTTTAACAATTAGGGATTGTCCTGTTTATGGAGCAGATACCACCCACAATTTGGGCAACACCGTCACAAAATATCGCACATCAAACATGTTATCATGGAGGAACAAAACAAAGAATTCTCAGATGACACAGCCTTTTCATGAAGACATAGACTCCCAAACAAAAGCAAGGCCTTTATACGAAGCTATTCATGAACCTCAGAGTCATGGTCCATCAAATCCTGGCGCCTCTATCTTAGTTCTA 2414 0.3786 MAESLLFGLTESLIGKLASVAIKEASLALGVYKDLEEMKGIRHFFSTSNPLVYRLRMARQIKDFRERLDKVAADRLNFGLAIKKMTHEPTYSCVNPSNVIGREHDKKKIIELLKKDGHNKSLSVVPIVGFEGLGKTTLAKLVFNDTDIDQYFSLKMWVCISNDFKLKNILVQILKCVPNQDNVNFEKCETEQLQNRLRNALQHHKFLLVLDDVWNEERDLWGDLRDILDVGVEGSKVLVTTHIDTIASMMQPEPSHCYSLPGLSPKDSFSIFVKCAFEEGEEKKHPQLLEIGEEIVRKCKGIPLAVKTLGSSLFSKFDEGEWKSVRDSAIWNLQQKERDIMPILQFSYDRLPSYLKPCFGCLSLFPEDFYIQSFYVSVMWDALCFLQPPRESETVNGVSNRYLRELLSRSFLTDFIDLDLYCFFKLHDLVRDHATYIAKGEFQIIYTCIPDEFKEAKHLAFMENDLLGQEATNEAFLNRLVSTCKYLTILDLSRSKYENLPRSIGNLKFLRYLCLLYSANLKSLPDSLCKLQSLQSLNLYGCIELQKLSKGIRALISLRHLLITTRQADVNFPEKEIANMTLETLEFCRCDNLEELFKGVQHFNLKSLLFSKCESLRKFSFHVLRSLESLAITECSMLDLSLGLGNQIPLSCLKLLHLCSLPQLVTLPMWLQGSSNTLNTLVIIDCFNLEHLPEWLSTMTSLRQLRIVFCPKLLTLPDCFNLERLTIRDCPVYGADTTHNLGNTVTKYRTSNMLSWRNKTKNSQMTQPFHEDIDSQTKARPLYEAIHEPQSHGPSNPGASILVL 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03060 804 PANTHER DISEASE RESISTANCE PROTEIN RP 54 730 IPR044974 GO:0006952
Pste4g03060 804 Pfam NB-ARC domain 103 349 IPR002182 GO:0043531
Pste4g03060 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 361 IPR027417 -
Pste4g03060 804 SUPERFAMILY L domain-like 425 749 - -
Pste4g03060 804 Gene3D - 348 436 IPR036388 -
Pste4g03060 804 Gene3D - 262 347 IPR042197 -
Pste4g03060 804 Gene3D Ribonuclease Inhibitor 440 602 IPR032675 -
Pste4g03060 804 Gene3D Ribonuclease Inhibitor 603 763 IPR032675 -
Pste4g03060 804 PRINTS Disease resistance protein signature 200 214 - -
Pste4g03060 804 PRINTS Disease resistance protein signature 622 638 - -
Pste4g03060 804 PRINTS Disease resistance protein signature 124 139 - -
Pste4g03060 804 PRINTS Disease resistance protein signature 299 313 - -
Pste4g03060 804 Gene3D - 85 255 IPR027417 -
Pste4g03060 804 FunFam Probable disease resistance protein At1g61300 83 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03060 Pste-Chr4 22065236 22070722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03060 498 561 WRKY Transcription Factor Family AT4G12020 43.750 4.66e-06 48.5