Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03052 ATGCTTAGACTAGAGAATTGTTTGCTTAGATCACCATTTTTGCTATGTATCTTCATTGGTTTGTTGATACATTCTGTTTTGGGAGCTGAGATTCCATTGGGGTCCAAACTTTCTGTGGTTGACAATGATTTTTGGGTTTCCTCCAATGATGATTTTGCAATTGGATTCTTCAGCATTCCAGATCAACCTAACCAGTTTAGTGTTGGCATTAGATTCAATTCCCAGTCTATTCCATATAGCCAACAAACTGTGGTGTGGATTGTTGGTGGTCATGACACCGTTGGGAACATGTCCTACTTTGAACTCACTCAGGAAGGGGAACTGGTCCTGTTTGATTCCTTAAAGAAAGATTATGTTTGGACCAGTGAAACCGGAAACGGATCTGTAGCTTCAGCTTCACTTCTGGACAGTGGAAATCTTGTTTTAATGGACAAAGATGAACACATCATTTGGCAAACTTTTGATACTCCATCTGATACACTTCTCCCAGAACAAAGTTTAGTTGCTAAGGAAGTGCTTCGGGCTGCACCTGCTAGCAAGAATAGCAAGGCCAGTTACTATACTCTTCACATGAATGCTTTTGGTCATTTGGAGCTACATTGGGAAAGTGGTGTTATCTACTGGATAAGTGAAAGTCCTTCGGCTTCGAATCTGAGTGCTTTCCTTACAAACAGTGGAGCTCTACAACTTCGCGACAGAAGCATGAAACCTGTTTGGTCTGTGTTTGGAGAGGATCACAATGATCCTGTGAAATACAGATATCTCAGGCTTGATGTGGATGGCAATCTTCGCTTATATTCTTGGGTTGAAAGTTTAGGATCATGGAGATCGGTCTGGCAGGCGGTTGAGAATCAGTGCAAGGTCTTTGCAACTTGTGGTGAACTTGGTGTCTGTGTCTTCAATGCCTCAGGTTCTGCTGAATGTAAATGCCCGTTTGAGGTATCTGAGGGTAACAAATGTTTAGTTCCATCTGTGGGGGAGTGTCAATCTGGTGTCAATATGATAGCTTATAAGAACACATATATGTATGCATTCTACCCTCCTGATAATTCTTTTATCACAAGTAGTTTGCAGCATTGTCAACAGTTGTGCTTGAATGACACACAATGTACGGCTGCAACATTTTCCAACGATGGAACTCCACAATGCTCAATAAAGAAAACTGGGTATGTCACTGGTTATTCAGATCCATCTGTAAGCTCAATATCTTTTGTAAAGAGATGTTCAGCTCCATTTGCTGTAAATCCAGGTCTCACCAAGTCTCCTCCTTCCAAACTGCCTTCTAAGTTGTGTGTTCCATGTCTAATAGGAGCTGCCACAGGCACATTTTTCATCTTGGTTATTCTCCAGTTAGGATTTGTGTTCTTCATCTACAGAAGAAAAAACTCTACCAGGAAAAAGACCACTTTAGCTTCTACAGGAACAAACTCAAAGGGTTTAATTGTGTTGTCCTTCTCAGAAATCAAGAGCCTTACAGGGGATTTCAAGAACCAAATTGGGCCAAAGGTGTTCAAGGGTTTGCTACCAAACAACCACCCAATTGCAGTTAAAGATTTAAATGCACCCATAGAGGAAAGAAAGTTCCGAAGTGCTGTTATAAAGATGAGTAGCATCCACCACAAGAATCTTGTGAAACTTGAGGGTTATTGTTGCGAGTTTGATCATAGATTTTTGGTGTATGAATATTGCAAGAAAGGTTCAGTGGACAAGTACATAGATGATCCTGCTCTTTGCAGGATGCTAACATGGAAAAAGAGAGTTGAGATATGCTCAAGTGTGGCAAAGGCCATATGTTATTTGCACTCCGGATGCCGTGAATTCATAAGCCACGGAAACTTGAATTGTGAAAATGTATTGTTGGATGAAAACTTGGGAGCCAAGGTGACTGAATTTGGGTTTGCTATTGCAGATGGTAAGGCAACATATTGTGGTCTTTCAGCTGAGAAGGATGTAGAGGATTTTGGCAAGTTAGTTCTAACCTTGTTAACCGGTTGTCATGATCATGATCGCGTTGAGCTTTGTGAGTGGGCATATAAAGAATGGATGGAGGAGAGGGTGGCCAATGTGGTGGATAGAAGAATGGAAAGGGCTTACAACTCTGATGAACTGGAGCGTGTGTTAAGAATCGCGTTTTGGTGCCTTCAAATGGATGAACGCCGGAGACCTTCCATGGGGGAAGTAGTGAGAGTACTTGATGGCACATTGAGTGTTGATCCCCCACCACCTCCTTTTGCCTTTCAGAGTCCATTGCAGGTAGATGATTCTGAAGAAAATGGCTCAGAATTAGAAGTATAG 2295 0.4179 MLRLENCLLRSPFLLCIFIGLLIHSVLGAEIPLGSKLSVVDNDFWVSSNDDFAIGFFSIPDQPNQFSVGIRFNSQSIPYSQQTVVWIVGGHDTVGNMSYFELTQEGELVLFDSLKKDYVWTSETGNGSVASASLLDSGNLVLMDKDEHIIWQTFDTPSDTLLPEQSLVAKEVLRAAPASKNSKASYYTLHMNAFGHLELHWESGVIYWISESPSASNLSAFLTNSGALQLRDRSMKPVWSVFGEDHNDPVKYRYLRLDVDGNLRLYSWVESLGSWRSVWQAVENQCKVFATCGELGVCVFNASGSAECKCPFEVSEGNKCLVPSVGECQSGVNMIAYKNTYMYAFYPPDNSFITSSLQHCQQLCLNDTQCTAATFSNDGTPQCSIKKTGYVTGYSDPSVSSISFVKRCSAPFAVNPGLTKSPPSKLPSKLCVPCLIGAATGTFFILVILQLGFVFFIYRRKNSTRKKTTLASTGTNSKGLIVLSFSEIKSLTGDFKNQIGPKVFKGLLPNNHPIAVKDLNAPIEERKFRSAVIKMSSIHHKNLVKLEGYCCEFDHRFLVYEYCKKGSVDKYIDDPALCRMLTWKKRVEICSSVAKAICYLHSGCREFISHGNLNCENVLLDENLGAKVTEFGFAIADGKATYCGLSAEKDVEDFGKLVLTLLTGCHDHDRVELCEWAYKEWMEERVANVVDRRMERAYNSDELERVLRIAFWCLQMDERRRPSMGEVVRVLDGTLSVDPPPPPFAFQSPLQVDDSEENGSELEV 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03052 764 Pfam S-locus glycoprotein domain 247 310 IPR000858 GO:0048544
Pste4g03052 764 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 156 - -
Pste4g03052 764 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 459 562 - -
Pste4g03052 764 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 157 277 - -
Pste4g03052 764 ProSiteProfiles Bulb-type lectin domain profile. 30 155 IPR001480 -
Pste4g03052 764 Gene3D Phosphorylase Kinase; domain 1 457 562 - -
Pste4g03052 764 Pfam Protein tyrosine and serine/threonine kinase 503 637 IPR001245 GO:0004672|GO:0006468
Pste4g03052 764 SMART blect_4 36 157 IPR001480 -
Pste4g03052 764 Gene3D Transferase(Phosphotransferase) domain 1 564 738 - -
Pste4g03052 764 Pfam PAN domain 347 397 IPR003609 -
Pste4g03052 764 Gene3D - 158 288 IPR036426 -
Pste4g03052 764 PIRSF SRK 3 641 IPR024171 GO:0004674
Pste4g03052 764 PIRSF SRK 640 763 IPR024171 GO:0004674
Pste4g03052 764 Gene3D - 28 156 IPR036426 -
Pste4g03052 764 PANTHER OS07G0415500 PROTEIN 15 745 - -
Pste4g03052 764 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 209 IPR036426 -
Pste4g03052 764 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 563 641 - -
Pste4g03052 764 ProSiteProfiles Protein kinase domain profile. 467 735 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g03052 764 SUPERFAMILY alpha-D-mannose-specific plant lectins 183 277 IPR036426 -
Pste4g03052 764 ProSiteProfiles PAN/Apple domain profile. 328 408 IPR003609 -
Pste4g03052 764 SUPERFAMILY Protein kinase-like (PK-like) 481 731 IPR011009 -
Pste4g03052 764 MobiDBLite consensus disorder prediction 738 764 - -
Pste4g03052 764 CDD B_lectin 46 157 IPR001480 -
Pste4g03052 764 Gene3D Hepatocyte Growth Factor 334 410 - -
Pste4g03052 764 SMART ntp_6 329 407 IPR003609 -
Pste4g03052 764 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 642 739 - -
Pste4g03052 764 Pfam D-mannose binding lectin 83 170 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03052 Pste-Chr4 21971175 21973469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03052 430 761 Receptor kinase-like Gene Family AT4G23190 29.111 7.14e-41 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pste4g03052 PK_Tyr_Ser-Thr 1.1e-19 CL0016