Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03047 CACACATCAGAGTTACTAGTACCATCTTAGCAACTCTTCTTTTTCATTGCTACTTTCTTAATTGTTCTGATTATACACAATATCTGAGTAGATCACCAACTTCTGAGATGATGCCCCCTGAGCAAGAAACCACTATTGCACCAAACATTCCAGTTATCACAAATCGATCAGAGACCAGCTCGGTCCACCATGAATCAGAGGGTTCAAACACTAACAAAATCAAACCAAGTTTGGAATTGGATGATGATAATGCCATTCCTGTGCGACATCAGACTCAGCCAACAACACCACCACCAAGATTTTCCGTTCTTCACCAACCCTTGCGCCCCATTACCCTCAAATTTGAAGACGTATCTTACAGCATAAGCGTGGAAAGGGAAAAGAAGAAGGGATGTAGAGTGTTAAGAAAAGAGTCAAAGCTAAGAAGAAAAGTGTTGAGCGGGGTGAGCGGAATAGCGAAGCCGGGGGAGTTAACGGCAATGCTGGGTCCGTCGGGGAGCGGGAAGACGACGCTATTAACGGCGTTGGCGGGAAGACTGAGAGGAAAAGTGTCGGGCAGCATAACGTACAACGGGCAGAGCGACGGGAGCATGGTGAAAGGAAGGGTGGGGTTCGTGCCCCAAGACGACGTTCTCTACCCTCACCTGACAGTGTTGGAGACCCTCAGCTACGCAGCGCTGTTGAGGCTTCCGAAGAGTTTGAGCGGAGAAGAGAAGAAAGAGCTGGCGGAAACGGTGATAGCGGAGCTCGGACTCAGTCGGTGTCGTAACAGCCCCGTTGGAGGGTGCATGGCTCTGTTCCGAGGCATTTCCGGTGGGGAGCGCAAACGGCATCGGCAGGAGATGTTGGTTAACCCGAGTTTGTTGTTTCTCGATGAGCCCACTTCCGGTTTGGACTCCACCACGGCCCAACTTATTGTCTCGGTGCTCCGCGGCCTTGCCCGGTCTGGTCGCACCGTCCTCACCACCATCCATCAGCCTTCCAGCCGCTTGTATAGGATGTTTGATAAACTCCTTGTCTTGTCCGACGGCTGCCCCATTTATAGCGGCCCTGCCCCTCGGGTCATGGACTATCTCCGATCCATTGGCTGTGTCCCAGCTTTCAACTTCGTCAACCCCGCTGATTTCCTCCTTGACCTTGCTAATGGCATAGTTGCTGATGTCAAACATGATGATCCGATAGAGCACCATGAAGATCAAGCTTCAGTCAAACAGTCATTAATTTCATCCTTTAAGAAGAACTTGTATCCTGCTCTCAAAGAAGACATTCACCAAAATAACAGTGATCCGCAAGCTTTTATATCAGGAACACCTAGACGCTCTGATAACCAATGGACTGCTAGCTGGTGGGAGCAATTTAGGTATTGTCTGTATCCATGCTCTCAGGACTTCTGTGGTGGCACTCTGATCCAGCACATGTACAAGATCAGGTGGGACTCCTTTTCTTCTTCTCCATCTTCTGGGATTTTTCCTCTCTTCAATTCCATCTTTGCATTTCCTCTGGAAAGGCCAATGTTAATAAAGGAAAGATCATCAGGAATGTACCAACTCTCCTCATACTATGTTGCCAGGATGGTGGGGGACTTACCTATGGAGCTAGTGCTTCCTACCATATTTGTAACTATCTCCTACTGGATGGGTGGTCTCAAGCCTTCATTGGTCACATTTGTGTTAACCCTCTTGATCATGCTCTTTAATGTTCTAGTCTCTCAAGGCATAGGCCTAGCACTTGGGGCTATTCTCATGGATGTGAAGCAGGCCACAACTCTGGCTTCAGTGACCATGCTGGTGTTTCTCTTGGCTGGTGGTTACTACATTCAGCAAATGCCAGCTTTTATTGCTTGGTTAAAGTACATTTCTTTTAGCCACTATTGTTATAAGCTACTAGTAGGAGTCCAGTATTCAATAAATGAGGTATACGAGTGTGGACCAGGGTTGCATTGTAGGGTAAGAGATTTTCCTGCCATAAAGTGTCTGGGGCTTGATGATAATAATATGTGGGGAGATGTGGCTGCATTGACTGTAATGTTGATTGGATACAGAGTTGTGGCATATCTAGCCTTGAGGATGGGGCAGCCTCACTGACTAAAGACTTAACACATGAGACCATGTTATTAATTTTCAAGTTTGGTTTTTTGAATCACCACCTCAGTTATCTTAAGTCCTTGTGATTAATTGACATAAATGAAACTATCAAAATTTGTTGAATATAGTCCACTTTTGTGTGAAGAAAAATCAGTTGTACCATTTAGACTCCATCTATAGTGTTTTAGTTATCAAGAGACAAGAGGGCAATGGTTTATTGCTGGCATCAAAAGCTGATTTTGCCATTTTGGATCTTCAGGGACGCATAATTATTGTTGCAAGTTGCAACATGGAACATATTAAGTAGATGCATATTCTTTCAGCATATGTATTTGGC 2421 0.4581 MMPPEQETTIAPNIPVITNRSETSSVHHESEGSNTNKIKPSLELDDDNAIPVRHQTQPTTPPPRFSVLHQPLRPITLKFEDVSYSISVEREKKKGCRVLRKESKLRRKVLSGVSGIAKPGELTAMLGPSGSGKTTLLTALAGRLRGKVSGSITYNGQSDGSMVKGRVGFVPQDDVLYPHLTVLETLSYAALLRLPKSLSGEEKKELAETVIAELGLSRCRNSPVGGCMALFRGISGGERKRHRQEMLVNPSLLFLDEPTSGLDSTTAQLIVSVLRGLARSGRTVLTTIHQPSSRLYRMFDKLLVLSDGCPIYSGPAPRVMDYLRSIGCVPAFNFVNPADFLLDLANGIVADVKHDDPIEHHEDQASVKQSLISSFKKNLYPALKEDIHQNNSDPQAFISGTPRRSDNQWTASWWEQFRYCLYPCSQDFCGGTLIQHMYKIRWDSFSSSPSSGIFPLFNSIFAFPLERPMLIKERSSGMYQLSSYYVARMVGDLPMELVLPTIFVTISYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQMPAFIAWLKYISFSHYCYKLLVGVQYSINEVYECGPGLHCRVRDFPAIKCLGLDDNNMWGDVAALTVMLIGYRVVAYLALRMGQPH 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03047 658 Pfam ABC-2 type transporter 289 351 IPR043926 GO:0140359
Pste4g03047 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 324 IPR027417 -
Pste4g03047 658 CDD ABCG_EPDR 74 314 - -
Pste4g03047 658 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 77 332 IPR003439 GO:0005524
Pste4g03047 658 SMART AAA_5 119 309 IPR003593 GO:0016887
Pste4g03047 658 MobiDBLite consensus disorder prediction 11 39 - -
Pste4g03047 658 Pfam ABC-2 type transporter 453 598 IPR013525 GO:0016020|GO:0140359
Pste4g03047 658 Gene3D - 74 326 IPR027417 -
Pste4g03047 658 Pfam ABC transporter 111 260 IPR003439 GO:0005524
Pste4g03047 658 MobiDBLite consensus disorder prediction 1 46 - -
Pste4g03047 658 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 31 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03047 Pste-Chr4 21869064 21873615 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03047 108 308 Calmodulin-binding Proteins AT2G36910 29.858 3.90e-09 58.2