Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03039 CGAAAATTCGTAGTTTACTTCGACACTTACAATAACAAAACCAATTCATTAACAGCCTCACACTCATTCTCTTTCCCCATCCCTCCCTCTATTTCTCTTCTTTGCAAGTAACAACCCGAGAGAGTGAAGAGAGTGAGGGAACAATGGAGAAAATGGCAGCACTCACTACTCACACTACCCACCATGTTTCTCTCTTCCCCACCAACACCACTCTTCCAAAGATATCATCTTTTCAACCCTTCTTCTCTAACCAACTACTGGGTCTACCCTTATCTTCTTCTGCTTCTTTAAACGCTTCCAAACGGTTCTCTTCATGGACCTGCAGACCCATCAAATGTTCCGTTTCTGAAGCCACAGAGCCAAAGACTGAGATGAAGAGGCAAATGCTGAGAAGAGGGGATGTGAGGAACATAGCCATTGTTGCTCATGTTGACCATGGGAAGACTACTCTTGTTGATGCCATGCTCAAACAAACTAAGGTATTTCGTGATAATCAATTTGTACAGGAAAGGATAATGGACTCAAATGATTTGGAGCGTGAAAGAGGAATCACAATACTGAGTAAAAATACATCTGTCACCTATAAAGACACGAAGATCAATATAATTGATACTCCCGGTCACTCTGATTTTGGGGGTGAAGTAGAGCGCATCTTAAATATGGTGGAAGGAATCCTTCTAGTGGTAGATTCTGTTGAAGGACCAATGCCACAGACAAGATTTGTCTTGAAGAAGGCTTTAGAGTTTGGTCACTCTGTTGTCGTGGTTGTGAATAAAATAGATAGGCCTTCTGCTCGCCAAGATTATGTTGTGAACTCTACTTTTGAACTCTTCATAGAATTGAATGCAACAGATGAACAGTGTGACTTTCAAGTAATATATGCAAGTGGTATAAAAGGACAAGCAGGTTTGTCTCCTGAAAATCTGGCAGAAGACCTTGGTCCATTGTTTGAATCCATCATTAGATGCATCCCTGGACCACGTATTGACAAAGATGGTGCTCTTCAAATGCTTGTTACAAATATTGAGTATGATGAACATAAAGGGCGTATAGCAATCGGGCGAGTGCAAGCTGGAGTTTTAGAAAAAGGCATGGATGTCCGAGTATGTACTTCTGACGATTCATGTAGATATGGAAGAGTTAGTGAGCTTTATGTGTATGACAAGTTCAATAGGGTCCCTGCAGATAATGTGGAGGCAGGTGATATATGTGCAGTATGTGGAATTACTGATATTCAGATTGGGGAGACAATTGCTGATAAAGTATCTGGGAAGCCACTACCTTCTATCAAGGTGGAAGAACCAACAGTGAAAATGTCTTTCTCCATAAACACTTCACCTTTTGTTGGCCGTGAGGGAAAATATGTTACCAGTAGGAATTTAAGGGACAGGCTTTATCGTGAACTTGAGCGCAATCTGGCTATGAAAGTTGACGATGGCGAAACAGCTGATACATTTGTTGTCAGTGGGCGTGGAACTTTGCATATCACCATACTCATAGAAAATATGCGAAGAGAAGGATATGAATTCATGGTTGGGCCTCCCAAAGTTATCAACAAGAAGGTGAACGAACAGCTGTTGGAACCGTTTGAGATTGCAACTGTGGAGGTACCCGAAGAGCACATGGGAGCTGTTGTTGAACTTCTTGGCAAGAGACGTGGACAGATGTTTGATATGCAAGGAGTTGGATCGGAAGGAACTACACTACTCAAATACAAGATTCCAACCCGTGGCCTTCTTGGATTGCGGAATTCAATTTTAACAGCCTCCCGAGGGACAGCTATTCTCAACACTGTCTTCGATAGCTATGGACCTTGGGCCGGTGAGATTAGTACTCGCGATCAAGGCTCATTGGTATGTTTGGCACTTATAGAAGCTTATAAACATTTTGTTGCATGGTACTCCATATTGCCATTGTTTCCTCCATTCATTAATGATAAGGATATGAAATTTCAGGTTGCCTTTGAGGATGGAACAAGTACTTCTTACGCAATCTCTAGTTCACAGGAGAGAGGACAGATGTTCATTGGTCCCGGAGTGGATGTTTATAAAGGTCAAATTGTTGGCATCCATCAGCGACCTGGGGACTTGTCCTTGAATGTTTGTAAGAAGAAAGCTGCAACCAACATACGTTCCAACAAGGAACAAACAGTGATTCTTGATACACCATTGGACTATAGTCTAGATGACTGCATTGAATACATCCAAGAAGATGAACTTGTAGAGGTCACCCCTGCAAGTATCCGAATGTGCAAGAATCCGAAACTTGCAAATGCAAAGAAAACAAGGTAGACTTCCCCTGTGAAGCAGTAATTTGCAAATTATTTCTGAGGTACCACTGCTGAAGCTTCATCAGCTGCTGAAGTGATGAAGAAACAAATACTACCATTCTTGTGATGTCACATATATTCTTCCAAAGCTGCAGGCAGAATAATATAGGAGTTGGCTAAAAAGAAATATTCATTATAGCTATTGTTCACAGTTGATTTAAAGCGATAAAGTTACACTAAATTTTGTTTACTTGCTTTGTAAAGTCTCTATATGTTAACAGTAAGGATAAGGAACATGAAGATATTAATTCTTCATCATATTGTTATTGGTGGCAAATAGCAATACAACAATACCTTGGGTTAAATTTCTAGTGGGTTTTCTAATACATTCATGTATTTTTTTAGTGAGAAAATAGGTGATATACTG 2696 0.4054 MEKMAALTTHTTHHVSLFPTNTTLPKISSFQPFFSNQLLGLPLSSSASLNASKRFSSWTCRPIKCSVSEATEPKTEMKRQMLRRGDVRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQFVQERIMDSNDLERERGITILSKNTSVTYKDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHSVVVVVNKIDRPSARQDYVVNSTFELFIELNATDEQCDFQVIYASGIKGQAGLSPENLAEDLGPLFESIIRCIPGPRIDKDGALQMLVTNIEYDEHKGRIAIGRVQAGVLEKGMDVRVCTSDDSCRYGRVSELYVYDKFNRVPADNVEAGDICAVCGITDIQIGETIADKVSGKPLPSIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVDDGETADTFVVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVNEQLLEPFEIATVEVPEEHMGAVVELLGKRRGQMFDMQGVGSEGTTLLKYKIPTRGLLGLRNSILTASRGTAILNTVFDSYGPWAGEISTRDQGSLVCLALIEAYKHFVAWYSILPLFPPFINDKDMKFQVAFEDGTSTSYAISSSQERGQMFIGPGVDVYKGQIVGIHQRPGDLSLNVCKKKAATNIRSNKEQTVILDTPLDYSLDDCIEYIQEDELVEVTPASIRMCKNPKLANAKKTR 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03039 715 SUPERFAMILY Translation proteins 233 380 IPR009000 -
Pste4g03039 715 NCBIfam translational GTPase TypA/BipA 87 574 IPR006298 GO:0003924|GO:0005525
Pste4g03039 715 FunFam GTP-binding protein TypA 281 381 - -
Pste4g03039 715 Gene3D bipa protein 602 689 IPR042116 -
Pste4g03039 715 FunFam GTP-binding protein TypA 471 564 - -
Pste4g03039 715 SMART EFG_C_a 477 566 IPR000640 -
Pste4g03039 715 Gene3D Elongation Factor G (Translational Gtpase), domain 3 382 470 - -
Pste4g03039 715 Gene3D - 85 280 IPR027417 -
Pste4g03039 715 CDD BipA_TypA_C 480 559 IPR035651 -
Pste4g03039 715 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 85 280 IPR000795 GO:0003924|GO:0005525
Pste4g03039 715 SUPERFAMILY EF-G C-terminal domain-like 480 581 IPR035647 -
Pste4g03039 715 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 77 255 - -
Pste4g03039 715 CDD TypA_BipA 86 279 IPR047041 -
Pste4g03039 715 Gene3D - 471 564 - -
Pste4g03039 715 Pfam Elongation factor Tu GTP binding domain 87 277 IPR000795 GO:0003924|GO:0005525
Pste4g03039 715 SUPERFAMILY EF-G C-terminal domain-like 385 469 IPR035647 -
Pste4g03039 715 CDD BipA_TypA_II 287 380 IPR047042 -
Pste4g03039 715 PRINTS GTP-binding elongation factor signature 133 141 IPR000795 GO:0003924|GO:0005525
Pste4g03039 715 PRINTS GTP-binding elongation factor signature 89 102 IPR000795 GO:0003924|GO:0005525
Pste4g03039 715 PRINTS GTP-binding elongation factor signature 153 163 IPR000795 GO:0003924|GO:0005525
Pste4g03039 715 PRINTS GTP-binding elongation factor signature 205 214 IPR000795 GO:0003924|GO:0005525
Pste4g03039 715 Pfam Elongation factor G C-terminus 477 563 IPR000640 -
Pste4g03039 715 Gene3D Translation factors 281 381 - -
Pste4g03039 715 FunFam GTP-binding protein TypA 84 280 - -
Pste4g03039 715 CDD BipA_III 387 465 IPR047043 -
Pste4g03039 715 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 287 IPR027417 -
Pste4g03039 715 FunFam GTP-binding protein TypA 388 493 - -
Pste4g03039 715 Pfam Elongation factor Tu domain 2 301 370 IPR004161 GO:0005525
Pste4g03039 715 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 126 141 IPR031157 -
Pste4g03039 715 NCBIfam small GTP-binding protein domain 88 237 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03039 Pste-Chr4 21810297 21819726 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03039 87 214 Eukaryotic Initiation Factors Gene Family AT3G22980 44.615 8.51e-24 105