Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste4g03038 | CACTTCCATACCTTAATACATTTTCGGTCTGCCCTTACATCGGACAAAATTGGAATATATAAATAACCACCTCATCATGCCACCTTTTCTACGGAGACAAAACCACATAAAAGAGAGACAAATTAAAAAAAACCATAGACACAAACACACAGAAACGAAGAGGGTTAAGGAAGAAGAAGGAGAAGCCGGACCCGGTGTCCGCGTTTCATTCATCTTTAATCCTCACCTTCCTCTTCTCCAAACCCTCCCTTAAATCACCACCCCATTCATACGTTTGAGATATTCTCTGCTATAATTATGTTTTTATATGTCATTCGTTAATTTGACCTCACCTTAATTGTTTCATCGTATTTGAGGTTGATTGATTATATCGTCTGCTTTTAACATCAATAATTTGATGTCCCATTGTTAGATTCATCTAAGGTGTTATCTGGATTAGGCCCTTCAATCTTGCGTTAATCATATATGAGAGTGATTGCAATGGGGAACTGTTGCGTGAGGCCATCGGGGCAATGCATAAAGGAGAAGAAAGAAAAGCAGAAGAAGAAGCGGGATCCGAAGGAGGAAGAGGCGGGGAAGAAGCTGGTGGTGCTGAAGGAGCCCACGGGCCGGGACATCGGGCTGAGGTACGAGCTGGGCCGGGAGATGGGCCGGGGGGAGTTCGGGGTGACGTACCTGTGCCGGGACAGGGAGACGAACGAGGAGTTGGCGTGCAAATCGATATCGAAGAAGAAGCTGAGAACAGCGATAGACATTGAAGATGTGAGGAGAGAGGTGGAGATCATGCGGCACTTACCGAAGCACGGGAACGTGGTGTCGTTGAAGGACACGTACGAAGACGACACTGCCGTTCACCTCGTCATGGAACTCTGCGAGGGCGGCGAGCTCTTCGACCGCATCGTCGCGCGCGGCCACTACACCGAGCGCGCCGCCGCCGCCGTCACCAAAACCATCGTCGAAGTCGTCCAGATGTGCCACAAACATGGTGTGATGCATCGGGATCTCAAACCTGAGAACTTTTTGTTTGAAAACAAGAAGGAAACGGCACCTCTAAAAGCTATTGACTTTGGATTGTCGGTTTTCTTTAAACCAGGTGAAAAATTTAACGAGATAGTTGGAAGTCCATATTACATGGCTCCTGAGGTATTATTGCGTAATTATGGCCCTGAAGTAGATATCTGGAGTGCTGGAGTTATTCTTTACATCTTACTTTGTGGTGTCCCACCGTTTTGGGCAGAAACTGAACAGGGAGTTGCCCAAGCAATAATTCGATCTGTTGTTGATTTTAAAAGGGAGCCCTGGCCAAAGGTTTCTGATAATGCAAAAGACCTTGTGAAGAAGATGCTCGATCCTGACCCAAAGCGCCGGCTTACTGCACAAGAAGTGTTAGATCATCCATGGTTACAGAATGCAAAGAAAGCTCCAAATGTTTCATTGGGAGAAACTGTTAAATCAAGGCTCATGCAATTTTCTGTAATGAACAAGCTTAAGAAAAGAGCTTTGAGGGTGATTGCAGAGCATTTGTCTTCAGAAGAAGCTGCTGGAATAAAGGAGGGATTCCAGCTGATGGATACGAGCAATAAAGGCAAGATTAATATTGATGACTTGCGAGTAGGGCTGCAAAAATTAGGTCACCAAATTCCTGATGGAGATGTCCAAATACTTATGGAAGCTGGTGATACAGACAACGATGGGTACCTAGATTATGAAGAGTTTGTTGCCATTTCTATTCATCTAAGAAAGATAGACCATGACGAGCACCTTCACAAAGCCTTCCAGTTTTTTGATAAGAACCAAAGTGGATATATTGAAGTTGAGGAGTTACATAATGCCTTAGCTGATGAGATTAAAACAAACAATGAAGAAGTCATCAATGCAATTATGCTTGACGTGGACACAGATAAGGATGGAAGAATCAGTTATGAGGAATTTGCAGTAATGATGAAGGCTGGCACAGATTGGAGGAAAGCATCAAGGCAGTATTCGAGAGAGAGTATTCAGTTTTTCAGATCTTTTGGGTTGTTGAGGGTGTCACTGGAGAAAGGAGAAGATGAAGGATTGGACAGGTCTTCGAAGTTGTGA | 2082 | 0.4448 | MRVIAMGNCCVRPSGQCIKEKKEKQKKKRDPKEEEAGKKLVVLKEPTGRDIGLRYELGREMGRGEFGVTYLCRDRETNEELACKSISKKKLRTAIDIEDVRREVEIMRHLPKHGNVVSLKDTYEDDTAVHLVMELCEGGELFDRIVARGHYTERAAAAVTKTIVEVVQMCHKHGVMHRDLKPENFLFENKKETAPLKAIDFGLSVFFKPGEKFNEIVGSPYYMAPEVLLRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVVDFKREPWPKVSDNAKDLVKKMLDPDPKRRLTAQEVLDHPWLQNAKKAPNVSLGETVKSRLMQFSVMNKLKKRALRVIAEHLSSEEAAGIKEGFQLMDTSNKGKINIDDLRVGLQKLGHQIPDGDVQILMEAGDTDNDGYLDYEEFVAISIHLRKIDHDEHLHKAFQFFDKNQSGYIEVEELHNALADEIKTNNEEVINAIMLDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRESIQFFRSFGLLRVSLEKGEDEGLDRSSKL | 538 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste4g03038 | 538 | SMART | efh_1 | 468 | 496 | IPR002048 | GO:0005509 | |
| Pste4g03038 | 538 | SMART | efh_1 | 396 | 424 | IPR002048 | GO:0005509 | |
| Pste4g03038 | 538 | SMART | efh_1 | 432 | 460 | IPR002048 | GO:0005509 | |
| Pste4g03038 | 538 | SMART | efh_1 | 360 | 388 | IPR002048 | GO:0005509 | |
| Pste4g03038 | 538 | Gene3D | Phosphorylase Kinase; domain 1 | 57 | 140 | - | - | |
| Pste4g03038 | 538 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 428 | 463 | IPR002048 | GO:0005509 | |
| Pste4g03038 | 538 | ProSitePatterns | EF-hand calcium-binding domain. | 477 | 489 | IPR018247 | - | |
| Pste4g03038 | 538 | CDD | EFh | 432 | 494 | IPR002048 | GO:0005509 | |
| Pste4g03038 | 538 | FunFam | calcium-dependent protein kinase 13 | 141 | 321 | - | - | |
| Pste4g03038 | 538 | ProSitePatterns | EF-hand calcium-binding domain. | 405 | 417 | IPR018247 | - | |
| Pste4g03038 | 538 | SUPERFAMILY | EF-hand | 342 | 509 | IPR011992 | - | |
| Pste4g03038 | 538 | Gene3D | - | 322 | 496 | - | - | |
| Pste4g03038 | 538 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 175 | 187 | IPR008271 | GO:0004672|GO:0006468 | |
| Pste4g03038 | 538 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 392 | 427 | IPR002048 | GO:0005509 | |
| Pste4g03038 | 538 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 40 | 489 | - | - | |
| Pste4g03038 | 538 | ProSitePatterns | EF-hand calcium-binding domain. | 441 | 453 | IPR018247 | - | |
| Pste4g03038 | 538 | Pfam | Protein kinase domain | 55 | 313 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pste4g03038 | 538 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 464 | 499 | IPR002048 | GO:0005509 | |
| Pste4g03038 | 538 | SUPERFAMILY | Protein kinase-like (PK-like) | 54 | 322 | IPR011009 | - | |
| Pste4g03038 | 538 | Gene3D | Transferase(Phosphotransferase) domain 1 | 141 | 321 | - | - | |
| Pste4g03038 | 538 | FunFam | Calcium-dependent protein kinase 1 | 57 | 140 | - | - | |
| Pste4g03038 | 538 | Pfam | EF-hand domain pair | 373 | 419 | IPR002048 | GO:0005509 | |
| Pste4g03038 | 538 | ProSiteProfiles | Protein kinase domain profile. | 55 | 313 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Pste4g03038 | 538 | FunFam | Calcium-dependent protein kinase 7 | 322 | 497 | - | - | |
| Pste4g03038 | 538 | Pfam | EF-hand domain pair | 431 | 494 | IPR002048 | GO:0005509 | |
| Pste4g03038 | 538 | CDD | STKc_CAMK | 54 | 312 | - | - | |
| Pste4g03038 | 538 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 356 | 391 | IPR002048 | GO:0005509 | |
| Pste4g03038 | 538 | SMART | serkin_6 | 55 | 313 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste4g03038 | Pste-Chr4 | 21783609 | 21790461 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste4g03038 | 6 | 521 | EF-hand Containing Proteins | AT5G19450 | 75.810 | 0.0 | 824 |
Transcription factors information