Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03034 AGGAGACTCCCTCTCACTTCCGACGAAGCGACGACTAACACCTAAAACCCCCTCTCTCGTAATTCCCCATTTCTCTGAATTTCATTTCGATTTCAATTTCAATTTCAATTTCGATTTCAATTTCAATTTCAATTTCAATTTCAATTTCATTCGAGTCGTGTTCGCAAGTGCTGAATGGGAACTCCCGAATTCCCAGATCTGGGAAAACACTGCGCCGTCTCCGATTGCAAGCTGATCGATTTCTTGCCCTTCACCTGCGATCGATGTGACCAGGTGTATTGTTTGGAGCACAGAAGTTATATTAAACATCAATGTGCCAAAGCTGACAAGCTAGATGTCACAGTAGTCATATGTCCACTTTGTACCAAAGGAGTTCGCCTAGTTCCTGATCAAGATCCAAACATAACTTGGGAGAATCATGTCAACACTGAGTGCGATCCATCAAATTACGAGAAAGCAACGAAGAAGAAGAAATGCCCTGTCCCTGGATGCAGAGAGATATTAGTGTTCTCAAACACAATTAATTGCAGGGACTGCAAGGTAGACCATTGTTTAAAGCATCGGTTTGGACCGGATCATAAATGTCCTGGCCCCAAAAAGGTGGAAACAAGTTTTTCATTTATGAATCTTGTGAACGGGAGCAAAAGACAGGACTCCAAACCCAAGTCAAGCCCATCCACATCATCTAAATGGACTACAAGCTTTCTTAATATGGCTTCTAACATTCGAGCTTCAGCTGAGGCTGGTGTGTCAAGGTTGAGGGGTGACAGTAACACAGCATGGCAGACAGCAAGGGGTGGGGTTGCACAGAGTCATACCAGTGGTCAAGTGGAGCAATGCCCTCAGTGTGGTGCCAAGTTTTCTTCTGTTACTACTTTGGTGGACCATGTGCAAAAAGTTCATGAAAGGAGTGGCAACCGATCTGGAGCAAAGGTTACAATTGATGTCTGTCCAAAGTGTAGTAGAGGTTTTCGAGATCCGGTGTCCCTTGTGGAGCATGTTGAGAGGGATCATGGTGGCAGTTCTAGAGCATAGTGATTGCTTCAATCAACACTTTTATCAGCTTCGAGAAAGGCCAATGCTGCAGGAATTTGCAAGCTTAAATCAGTTAATAGTGAGTGTATACTGTCTAATGGTAGGTTGTATAGCCGACAGACCTCAATGAAAGGAAGGCAAAAGAATGAAAAGCAGAAGATATGGAAAAACAAATCTGTAATAGTTGAATCATTTATTTATTTATTTTTATTAAAGGAATTTGGATTAAAAGTCCAAACGTAGTTCAATGACACTTTTTTTTATTGGCATATGTTAGTTTTTTAGTGGG 1324 0.4184 MGTPEFPDLGKHCAVSDCKLIDFLPFTCDRCDQVYCLEHRSYIKHQCAKADKLDVTVVICPLCTKGVRLVPDQDPNITWENHVNTECDPSNYEKATKKKKCPVPGCREILVFSNTINCRDCKVDHCLKHRFGPDHKCPGPKKVETSFSFMNLVNGSKRQDSKPKSSPSTSSKWTTSFLNMASNIRASAEAGVSRLRGDSNTAWQTARGGVAQSHTSGQVEQCPQCGAKFSSVTTLVDHVQKVHERSGNRSGAKVTIDVCPKCSRGFRDPVSLVEHVERDHGGSSRA 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03034 286 ProSiteProfiles Zinc finger AN1-type profile. 95 145 IPR000058 GO:0008270
Pste4g03034 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 220 248 IPR013087 -
Pste4g03034 286 MobiDBLite consensus disorder prediction 154 173 - -
Pste4g03034 286 ProSitePatterns Zinc finger C2H2 type domain signature. 222 243 IPR013087 -
Pste4g03034 286 Gene3D Classic Zinc Finger 199 283 - -
Pste4g03034 286 Gene3D - 2 56 IPR035896 -
Pste4g03034 286 Gene3D - 80 151 IPR035896 -
Pste4g03034 286 SUPERFAMILY AN1-like Zinc finger 54 144 IPR035896 -
Pste4g03034 286 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 5 248 - -
Pste4g03034 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 257 285 IPR013087 -
Pste4g03034 286 Pfam AN1-like Zinc finger 13 51 IPR000058 GO:0008270
Pste4g03034 286 Pfam AN1-like Zinc finger 101 141 IPR000058 GO:0008270
Pste4g03034 286 SMART AN1_Zf_4 101 142 IPR000058 GO:0008270
Pste4g03034 286 SMART AN1_Zf_4 13 52 IPR000058 GO:0008270
Pste4g03034 286 SMART c2h2final6 257 280 IPR013087 -
Pste4g03034 286 SMART c2h2final6 220 243 IPR013087 -
Pste4g03034 286 SUPERFAMILY AN1-like Zinc finger 6 50 IPR035896 -
Pste4g03034 286 ProSitePatterns Zinc finger C2H2 type domain signature. 259 280 IPR013087 -
Pste4g03034 286 ProSiteProfiles Zinc finger AN1-type profile. 7 55 IPR000058 GO:0008270
Pste4g03034 286 FunFam AN1-type zinc finger protein 2B isoform X1 3 64 - -
Pste4g03034 286 Pfam C2H2-type zinc finger 221 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03034 Pste-Chr4 21730868 21735942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03034 1 286 C2H2 Transcription Factor Family AT2G41835 63.194 5.19e-127 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste4g03034 zf-AN1 4.2e-08 No_clan