Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03033 AAAGGGAGAGTAAGAAGAAATTTTCTGAGAGATATTAGAGAGAAATGACTGAAGAAAGTGCTGGAAACACAGTTGCAACCTCTATTACCCCATTCAATTGGTGGTATCTCCAAGCAAATTCTCTTTCTTCCTGGAACGATACTAATAACACATGGAACAACCAACCAAACCCTAATTCTTCCTCTTCTTGTGAGGAGGATATATCTGTTTCTACATCTTTCACTAATGTTTCCAACCATTCAAGCCTGACTGTTGAGTCCTCTCGCAGACTCATCGAGCCACCTGCTCCTTCCTCCACCGAGTTGATGGGAGAACATGCTTCAGATAATCAACTTTGGAGCCATGTTCTATCAGGTGTTGGATCAAACGGGGAGTTGAACAGCAGCCAAGAAATTGGAGAGAACTTTGTGGATGCACTGTCATCCAAAAGCATGTCAAGCACTATGTTTCAACCAGTCTGTGATTATTTGAAGAAACTTGATCATACAAGTTGGGAATATAGTGGTTCAACTTCATTAAATAGCTTTGAGAAGCATTTAAATGGGTTTAGTGAGGCGATGATTGAGAATAATGAAAGGTTGACCAAGTTATCTAATCTTGTAAGCACTTGGTCTATTGCCCCACCAGACCCAGAAGTTAGCAGCCACTTTGATCCACAAACAAACAACATATCCTTGAGTTCTTCCATGGATCACTTCCCACAATCTGATAACTTCAAGCAACCTTTTGGGGACTCCGCTTCATCATGCTCTCTTGGAGGAGCAAACAGAAATTCTGCGGTGTTCCTTAATTGCTATGATAATCATGACATGAAAGTCAAGCAAGAGTATCATGCAAGTGAAGTGCCAGGAGCGGTATTTGGAAAATCATTAAATGCAAATGGATATCAAAATGGTTTTAATACCCTTTCAGTGGGAGATAGTTGCAAACTCTACCATGGCATGCCAAACCTTTCTTCATGTACAAGAAATTTCTCAGATGTTATATCCTTTAATAGTCGATTGGGAAGGCCAGTTATTGGAATCCAAGATCAGAAGCCTAGTATGAAGTACCTGAACATTTCTGAAACAAAGAAGCAAGGTCTTCAGACAGTATCACCGCTAAGAACTAATGTTAATGGAAAAGGGGAGGGGACAGCACGTGAAGTAAAGAAGAAAAGATCAGAAGAATCTTCGGATGCAACGTTGAAAAAGCCTAAGCAAGATATATCAACAGCTTCTTCTTCAAAGGTGCAGGCACCCAAAGTCAAGCTAGGGGACAAAATCACAGCCCTTCAGCAAATTGTGTCTCCATTTGGAAAGACGGATACAGCATCTGTGCTGTTTGAAGCAATAGGATATATAAAGTTTCTTCAAGAACAAGTCCAGCTATTGAGCAACCCTTACTTGAAGACTAACTCTCACAAGGATCCGTGGGGATGCTTGGATAGAAAGGAGAAGGACGATACAAAACTAGACCTTCGGAGCAGAGGTCTTTGTTTGGTTCCTACTTCATGCACTCCTCTAGTTTACAGAGAGAGTAGTGGACCAGATTACTGGACACCAGCATACAGAGGATGTTTGTATAGGTGAAAAATAGTGTCGCTTCTAAGATATATAGCATGTGAGTGAATGTACGTACGTTGGTCGAATCTTGAAAAAATATAAATTAAGGTCTATAGAATAAATTGTCTATGAGATCATGGGAAACGTAACTTTTGTTTTTCTAGCTGTAATGCATCAGTTATATATATGAGTAAACAGATTTTGATTGATG 1755 0.4 MTEESAGNTVATSITPFNWWYLQANSLSSWNDTNNTWNNQPNPNSSSSCEEDISVSTSFTNVSNHSSLTVESSRRLIEPPAPSSTELMGEHASDNQLWSHVLSGVGSNGELNSSQEIGENFVDALSSKSMSSTMFQPVCDYLKKLDHTSWEYSGSTSLNSFEKHLNGFSEAMIENNERLTKLSNLVSTWSIAPPDPEVSSHFDPQTNNISLSSSMDHFPQSDNFKQPFGDSASSCSLGGANRNSAVFLNCYDNHDMKVKQEYHASEVPGAVFGKSLNANGYQNGFNTLSVGDSCKLYHGMPNLSSCTRNFSDVISFNSRLGRPVIGIQDQKPSMKYLNISETKKQGLQTVSPLRTNVNGKGEGTAREVKKKRSEESSDATLKKPKQDISTASSSKVQAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKTNSHKDPWGCLDRKEKDDTKLDLRSRGLCLVPTSCTPLVYRESSGPDYWTPAYRGCLYR 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03033 508 CDD bHLH_AtbHLH_like 402 444 IPR045239 -
Pste4g03033 508 Gene3D - 400 455 IPR036638 GO:0046983
Pste4g03033 508 MobiDBLite consensus disorder prediction 363 382 - -
Pste4g03033 508 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 387 436 IPR011598 GO:0046983
Pste4g03033 508 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 153 486 - -
Pste4g03033 508 MobiDBLite consensus disorder prediction 33 52 - -
Pste4g03033 508 MobiDBLite consensus disorder prediction 353 395 - -
Pste4g03033 508 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 402 453 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03033 Pste-Chr4 21722785 21726027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03033 23 508 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 32.277 1.09e-47 168