Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03030 AGATTAGAGCGAGAGAGAAAGACAGAGAAGATGAAAAGAAAGGCAAATTGTGACAACCATTATTCATTGAACAGAGGTCCCTGGTCTGCTGAGGAAGACCAAATTCTTATCAACTACGTTCATGTCCATGGAGAAGGAAATTGGAGAGAGCTTTCCAAAAGAGCTGGTTTAAAACGAACTGGCAAGAGTTGCAGACTTCGATGGTTGAATTATCTCAAGCCAGATATTAAGAGAGGAAACATTTCTTCTTCCGAAGAAGATCTCATTATCAGGCTTCATACCCTTTTAGGGAATAGATGGTCTCTGATTGCGGGACGATTACCTGGGCGTACAGACAATGAAATCAAGAACTATTGGAATACTTATTTGAGAAAGAAGGTAGAGCATAACAGCAACATTATTCCTATGAAATTAAAAATGGAATCTCCACAGAGCTCAAAGAACGGTTTGGGTATTGTTTTTGATCCTACAAAATCCTCTCACCCAATTACGATGCCAACTCGAGCAGTCAATGATATTACAACAAGCTGGGATCAAAACCCTTTTGTATCTATACCAGAAGTTGCCCATGATCATTGCTCAGAAGGTTTCCTCAAACATTTTGATAATTATGATCTATTAATGCCATATGAGGATTGTCATTTCAACGGATATGATCGTGTCGAACATTTTGGAGATGAAGCCTACAGGGTTGATAAGTGA 702 0.3903 RLERERKTEKMKRKANCDNHYSLNRGPWSAEEDQILINYVHVHGEGNWRELSKRAGLKRTGKSCRLRWLNYLKPDIKRGNISSSEEDLIIRLHTLLGNRWSLIAGRLPGRTDNEIKNYWNTYLRKKVEHNSNIIPMKLKMESPQSSKNGLGIVFDPTKSSHPITMPTRAVNDITTSWDQNPFVSIPEVAHDHCSEGFLKHFDNYDLLMPYEDCHFNGYDRVEHFGDEAYRVDK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03030 233 ProSiteProfiles Myb-like domain profile. 20 72 IPR001005 -
Pste4g03030 233 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 11 144 - -
Pste4g03030 233 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Pste4g03030 233 SMART sant 77 125 IPR001005 -
Pste4g03030 233 SMART sant 24 74 IPR001005 -
Pste4g03030 233 Gene3D - 25 77 - -
Pste4g03030 233 CDD SANT 27 72 IPR001005 -
Pste4g03030 233 SUPERFAMILY Homeodomain-like 22 119 IPR009057 -
Pste4g03030 233 Pfam Myb-like DNA-binding domain 78 123 IPR001005 -
Pste4g03030 233 Pfam Myb-like DNA-binding domain 25 72 IPR001005 -
Pste4g03030 233 FunFam MYB-related transcription factor 24 77 - -
Pste4g03030 233 Gene3D - 82 149 - -
Pste4g03030 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 127 IPR017930 -
Pste4g03030 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 76 IPR017930 -
Pste4g03030 233 CDD SANT 82 123 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03030 Pste-Chr4 21703106 21704958 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03030 12 127 MYB Transcription Factor Family AT3G13540 67.241 2.36e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste4g03030 Myb_DNA-binding 2.8e-17 CL0123