Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03027 GTGTTGGAGGGAGTAAGATACTGGTGACTACTCGTAGTCACTCAATAGCTGCCATGATGTGGACTAAATCCTCTTACTCTTACCTTCTAAGAGGCCTCTCTGAAGAGGATTCCTTCTCTCTATTTGTCAAATTGGCATTTAAAGAAGGGGAAGAGAAAAAACATCCACAACTTCTGGAGATAGCAAGAGAGATTGTGAAAAGATGTGGAGGGATACTGTTGGCGGTGAAAACATTAGTGTATGTTGCAAAAGGAGAGTATCAACTAATAGATTCCCGTAAGCATGCCCAACATTTATCCTCTCAAAATAATTTTCTTGGCAAAGCTCTGCTTCCCATAGGTTTGAAAACTTTAACTATTCAGCACAATGCCACCAATGAAGCTTTCTTGAATACATTGGTATCTAGATGCAAATACTTAAGGTTCTTAGAGTTAAACAATTTTGAGTATGAGAGTTTGCCTCGCTTAATTGGAAAGTTGAAACATTTAAGATTTCTCAGTCTTCAGGATAGTGAAAAACTCAAGAGAGTCCCTGATTCAGTATACAAACTCCAAAATTTGCAAACTTTGAACCTCATAGGATGCTCAAGTCTACAAGAATTGCCAAAAGGAATAAGAAAACTGATAAGCCTTTGTCAGCTGTTTTTAACCACAAAGCAACTTGATTTACCAGAAAAAGAGATTGCAAATTTGACTTCTTTGAAACTTTTATTTCTCGATGTTTGTGATAAATTGGAGTCAGTGTTAGAAAAGATGCAACTTTCTAGGCTTAAAACTTTGGGTTTTAGAAAGTGTGAGACACTAAGGTCTTTGTCATTTAATCTTATAAAAAATGTAGAACCTTTTATGATCAATGACTGTTTAAATTTGAATTTGTCAATGAACCTTGGCAACCAAATCCCCAATTCGAGGTTGAATCACCTTTCTCTTGTAGGTTTGCCACAGCTGGTCACTTTGCCTCAGTGGTTGCAAGGATGTATTTATACATTACAAGTCTTGTATATATGTTATTGCAAGAATCTTAAGGAGCTTCCTGAGTGGCTGCCAACTCTGATTTATCTAAAAACACTTCAAATTAGAGATTGTCAAGAGCTGCTCTCACTCCCTAATAACACGCATCACCTAACAAATCTTGAGTACTTAGAAATTAATGGTTGTCCTGAATTGTACAAAAGATACCAAAGGATGATTGGACAAAATTGGAATAAAATA 1211 0.3617 MMWTKSSYSYLLRGLSEEDSFSLFVKLAFKEGEEKKHPQLLEIAREIVKRCGGILLAVKTLVYVAKGEYQLIDSRKHAQHLSSQNNFLGKALLPIGLKTLTIQHNATNEAFLNTLVSRCKYLRFLELNNFEYESLPRLIGKLKHLRFLSLQDSEKLKRVPDSVYKLQNLQTLNLIGCSSLQELPKGIRKLISLCQLFLTTKQLDLPEKEIANLTSLKLLFLDVCDKLESVLEKMQLSRLKTLGFRKCETLRSLSFNLIKNVEPFMINDCLNLNLSMNLGNQIPNSRLNHLSLVGLPQLVTLPQWLQGCIYTLQVLYICYCKNLKELPEWLPTLIYLKTLQIRDCQELLSLPNNTHHLTNLEYLEINGCPELYKRYQRMIGQNWNKI 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03027 386 Gene3D - 14 82 IPR042197 -
Pste4g03027 386 Pfam NB-ARC domain 12 83 IPR002182 GO:0043531
Pste4g03027 386 SUPERFAMILY L domain-like 89 368 - -
Pste4g03027 386 Gene3D Ribonuclease Inhibitor 83 380 IPR032675 -
Pste4g03027 386 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 64 IPR027417 -
Pste4g03027 386 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 86 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03027 Pste-Chr4 21664623 21666209 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03027 133 222 WRKY Transcription Factor Family AT4G12020 40.860 4.63e-09 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g03027 4 21664623 21666209 Pste4g03027 4 21664623 21666209 ECH