Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03019 CTTCCTCTTCGAATCAGCGTTGAAACACCGAAACGCGATTCCAGATTGAATCAAAATCACGTTTTCACCTCTCCGCTTTCGCAATTTCGAATTCGCCTTCGCCTCTCTCGAACTCCTTTGATGCATTCGCGTTTCCCCGCACCGAACGAACCTCTTTTTCGCTCAACAGCATCGGTGATCGCAATTCAAAGCCTTCCTGAAAACGCCGTAACAATGGACGGTGACGATGACACTTCATCACTCGCATGGCTTTGGACCATTGAAGCCTTATCCACCGTCAAAGAAATCCCCATTGCCACTCTGCAGGGTTTGATTGATGCTGCACCTGTGAGGAATGATAAGTTTAGAGAAAATGCAAAGGAATTGGTTGCTTTGAGGTGTTTGGAGGAACTATCTACTCGTGTGGTTGACCCTGGCACTTCTTCTACCTTGGATTCCAGAGTTGGATTTGATTTTTCGCGGCGATGTGAAGATGTCCTCCTGGAAATATTGGGTGAGATCCCATCATCAAATCCGAAAATGGCTGGAGAAGAGCTTTTGAAATCGGATGTTTACCAATTCATTAAGCACAAAAGAGCTGGTACTTTTAAATGTCACTTAGAGCAGATGAGAGAAATGATCTTGAAAGGTACTCATCCACATTCTGATTACTTGAGAGAAAGGAGTGGACTATTTCCTGGGAATAGCAGTTATACAGTGCTTGTAAATGATATCAAATGTGATAATAATTCAGATAAGGATGTTGGGAACGTCACTGATGCAGAAAACATGGTAGATAAAGAAAATTCGGTGTCCTTAATTTTAGAGCATGCAAATAAAACTTCAAAAGAACACCTGCTTGATTACAATTTTTCACCCTCTAAGAGTAAGAGGAGTAGGGTTTACTCAGCTGATGATCATCTTACAAAACACCTTCATGAAAAGCAAGTTTGTGCAAATGAATGTGATGATTTCTTTGGAAATTCAAAGAGGATTAAATGTTATGCATATCCAGGTTTTGAGCCTAAGAAAGTAGAGTCAGTTTCTCAACTCAGACAAGAAGTGTCAGAACATTTAACTGAAAGAATCCTTCTAGTTTCTGAGCAAGGAGAGCATCATATAGAAAACCAGAAGATGGAAAATTTGGGTGATGGGTCCTCAGAGGATAGTCACAATAGATGCACTACTTCAAAGTTGTCCCAATCCAGCAGCCATATTGAAGTCTTCCAGGATGAATCAAATATTCATTTTAATGATACTTTGGTGCCTCAACATACATTTGGGGGTGAAAATTCTCCGCTACTGCAGATTGAGTCAATTCCGCATGTTGCACTTCCAGATGGAATCCAGCATAAGATTTCTGGAAGTAAACCCTGGTCTAAACATGAAACAGATATACAACTCGAAGATCCAAATGGATCACAGCAGCAAATTGCTAGTTTTAAATCTCCAGATGATACTGGGAATGGTTGTGGGGTAGAGATATCAGGTGATTTTGTGTATCAAAGTCAAAAGATTAACCTTGAAACTAAAAAGCAGACTGAGCAAAATCTTTGTTTGAAGTGTAATGAAGGTGAACAATTACTGATTTGTGATGTAAATTTTGTCCAACCAGTGGTTCCTGAATGTTGTCTTGGAATGACAAGCACCATTATTCCTCAGCATACCTCTGTAGCTGAACCTTGCAATGATACATCTATGGATGAAACCAAGGATAATTCACAACATTGCATTCCAACAAATGATGCTAATGCCGAAAAAGTTCGACACACAATTAATTTACTCCAACTCAAACAGAAAGATCCTGATATTACATCTTTAAATCTCTCTCCAAAGCCAGCTGCTAGTAATATGACTATAGTTGATATGGTTAATGGTTGTGGAGCAGAGTTATCAAGTAATAGTGATGGAAATCACAATGAAAAAAATTATATTGAAGCATTAAAACATGAATTCCTGCACTCCCACTGCACAGTCAATCAAGATTTCTCTGCAATGATTGAATCAACTAAACAAAATTGTTGCATGAAGTGTAATGAAGGTGGCCAATTACTGGCTTGTCAAATGACTACTTGCCCAATTATTATGCATAAAAACTGTCTAGGTGCATCTGCTCAATTGGATGCCAAGGGCAACTTTGTTTGCCCTTTTTGTGCATATTTTCATGCTCATCTAGAATATTGTGAAGCTAAGAAAAAAGTTTCCTTGGCAAGGAAAAATTTAGCTATCTTTGTTACTAAAGGTAAACTGAATCAAGCTGTGGAACTTGTTCATGAATTTCATAGACAAGAACATTGTATTTCAGGAAAGAGTAGTAAGTGTGAGCATATTCATGTCAAAAACAACAAAGATGATCAGTTAACAGGGTGTGAAGACAATAGAGAAGATCATATTGGTGAGCATTCAAATGACGCTAATAATCTTCAGATCAAAAGAAGTCAGCAACAAGCACCTATATCATGCATCCATTCATCTTGGAGAGAAAAGGAAAATGTAAATAATGGACCAGTTGAAGTATTAAGAGAAGAGGAAATAGGTGAAATGCCAAATGCAAAGAGGTTAACTGGCGGAGATGAAGAAAATGAAGTGCCAACTGACCATGTAGATGGACATGGTGATAAGTTTACTAGTGAAAAAACAAATATTGCCCCTGTTAAGCGAAGCAATGTTGAAGAAGACGATCCACAAAAAATGACAAAACAGCACAATATTGATGGAACAATAGAGCCAGTTTGTTCACATAATAGTGGAAAAGAGGAAATTTCTGAAAATGAACGTGAAAAGCATAGTATTCCTAGATACTCCATGAGATTCCGAAAACGTGAAACACCATGCAAATTCCAAACAAGTCCAGTATTTCTGGGTAATCAGTTAAGACGAAAGAAAGTTCCATGGACAGCTGAGGAAGAAGAGCTGATAAGGGAGGGAGTGCAGAAGTTTGGTTTCGATGATCCAATGAAATGGAAAAAAATTTTGAAATTTGGTTCTCATGTGTTTGAGAAGATTGGTAGACGTCGTACACCACAAGACTTGAAAGATAAATGGAAGAACATGTGCAAAACTCACTCAAGATCAAAATGAAAGGCTTCATCTCAAGTGATACTTAAAAGAT 3091 0.3827 LPLRISVETPKRDSRLNQNHVFTSPLSQFRIRLRLSRTPLMHSRFPAPNEPLFRSTASVIAIQSLPENAVTMDGDDDTSSLAWLWTIEALSTVKEIPIATLQGLIDAAPVRNDKFRENAKELVALRCLEELSTRVVDPGTSSTLDSRVGFDFSRRCEDVLLEILGEIPSSNPKMAGEELLKSDVYQFIKHKRAGTFKCHLEQMREMILKGTHPHSDYLRERSGLFPGNSSYTVLVNDIKCDNNSDKDVGNVTDAENMVDKENSVSLILEHANKTSKEHLLDYNFSPSKSKRSRVYSADDHLTKHLHEKQVCANECDDFFGNSKRIKCYAYPGFEPKKVESVSQLRQEVSEHLTERILLVSEQGEHHIENQKMENLGDGSSEDSHNRCTTSKLSQSSSHIEVFQDESNIHFNDTLVPQHTFGGENSPLLQIESIPHVALPDGIQHKISGSKPWSKHETDIQLEDPNGSQQQIASFKSPDDTGNGCGVEISGDFVYQSQKINLETKKQTEQNLCLKCNEGEQLLICDVNFVQPVVPECCLGMTSTIIPQHTSVAEPCNDTSMDETKDNSQHCIPTNDANAEKVRHTINLLQLKQKDPDITSLNLSPKPAASNMTIVDMVNGCGAELSSNSDGNHNEKNYIEALKHEFLHSHCTVNQDFSAMIESTKQNCCMKCNEGGQLLACQMTTCPIIMHKNCLGASAQLDAKGNFVCPFCAYFHAHLEYCEAKKKVSLARKNLAIFVTKGKLNQAVELVHEFHRQEHCISGKSSKCEHIHVKNNKDDQLTGCEDNREDHIGEHSNDANNLQIKRSQQQAPISCIHSSWREKENVNNGPVEVLREEEIGEMPNAKRLTGGDEENEVPTDHVDGHGDKFTSEKTNIAPVKRSNVEEDDPQKMTKQHNIDGTIEPVCSHNSGKEEISENEREKHSIPRYSMRFRKRETPCKFQTSPVFLGNQLRRKKVPWTAEEEELIREGVQKFGFDDPMKWKKILKFGSHVFEKIGRRRTPQDLKDKWKNMCKTHSRSK 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03019 1019 SUPERFAMILY FYVE/PHD zinc finger 662 717 IPR011011 -
Pste4g03019 1019 SMART sant 954 1014 IPR001005 -
Pste4g03019 1019 SUPERFAMILY Homeodomain-like 952 1013 IPR009057 -
Pste4g03019 1019 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 660 719 IPR013083 -
Pste4g03019 1019 SMART PHD_3 667 712 IPR001965 -
Pste4g03019 1019 MobiDBLite consensus disorder prediction 844 869 - -
Pste4g03019 1019 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 952 1016 IPR017930 -
Pste4g03019 1019 Pfam Myb-like DNA-binding domain 955 1010 IPR001005 -
Pste4g03019 1019 ProSiteProfiles Myb-like domain profile. 950 1012 IPR001005 -
Pste4g03019 1019 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 565 1014 - -
Pste4g03019 1019 MobiDBLite consensus disorder prediction 900 921 - -
Pste4g03019 1019 MobiDBLite consensus disorder prediction 844 870 - -
Pste4g03019 1019 CDD SANT_TRF 956 1013 - -
Pste4g03019 1019 Gene3D - 949 1015 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03019 Pste-Chr4 21573953 21580006 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03019 947 1012 Single Myb Histone (SMH) Gene Family AT1G17520 45.455 8.05e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste4g03019 Myb_DNA-binding 3.5e-09 CL0123