Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02987 ATGTATAAATGGTTCAAGGGTTTGGAGTGTGAGGAGGAGAGGAGAGCCAAAACCCTAGAACAGAGCAGCAAGATGGTGAAGTTCTTGAGACCAAACAGGGCGGTGATAGTTCTGCAGGGGCGTTACGCCGGCAAGAAGGCGGTGATAGTGAGAACCTTCGATGAGGGAACGAGGGAGCGTCCGTACGGTCACTGCCTGGTGGCAGGAATCAAGAAGTATCCTGCTAAGGTCATCAAGAAGGACTCTGCGAAGAAGACCGCGAAGAAGTCCAGGGTGAAGGCGTTCGTGAAGCTCGTGAACTATCAGCACCTGATGCCGACGCGCTACACGGTCGATTTGGATCTCAAAGACGCCGTCAACCCCGACGCTCTCACTTCCAAGGAAAAAAAGGTCACCGCTCTGAAGGAGACCAAAAAGCGCCTCGAAGAGCGCTTCAAGACTGGCAAGAACAGGTGGTTCTTTACCAAACTCAGATTCTGA 480 0.525 MYKWFKGLECEEERRAKTLEQSSKMVKFLRPNRAVIVLQGRYAGKKAVIVRTFDEGTRERPYGHCLVAGIKKYPAKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTVDLDLKDAVNPDALTSKEKKVTALKETKKRLEERFKTGKNRWFFTKLRF 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02987 159 PANTHER 60S RIBOSOMAL PROTEIN L27 25 159 IPR001141 GO:0003735|GO:0005840|GO:0006412
Pste4g02987 159 ProSitePatterns Ribosomal protein L27e signature. 148 159 IPR018262 GO:0003735|GO:0005840|GO:0006412
Pste4g02987 159 Coils Coil 124 151 - -
Pste4g02987 159 SUPERFAMILY Translation proteins SH3-like domain 27 159 IPR008991 -
Pste4g02987 159 CDD KOW_RPL27 30 112 IPR041991 -
Pste4g02987 159 Pfam Ribosomal L27e protein family 76 159 IPR001141 GO:0003735|GO:0005840|GO:0006412
Pste4g02987 159 SMART kow_9 28 55 IPR005824 -
Pste4g02987 159 Gene3D - 25 159 IPR038655 -
Pste4g02987 159 FunFam 60S ribosomal protein L27 25 159 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02987 25 159 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 79.259 1.87e-78 227