Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02985 AAGGGAGCTTGGACTCCTGAAGAAGATCAAGCCTTGGTTGACTACATCAAGAAGAATGGTCATGGAAGTTGGCGTACACTCCCAAACATGCAGGTGCAATTTCTTTCTCACTTTCTTCTTCTCTGCTTCTGCATTTCTTGCAAGCTATTTTTTCTTTTCCTTTTTCCAACATTTTTAAGAAGAATATGCCTTTTTTTCTCTGTCACTCAAGTTTTTATTTTTCTTAAGATTTTAGGTCTCCTACGATGTGGAAAGAGTTGTCGGCTTCGGTGGATAAACTATCTTCGCCCTGGCATCAAGCGTGGCCCTTTTACTAGTGAAGAAGAACGTACAATTGTTCAACTTCATGGTATGCTTGGCAACAGGTGGGCTGCTATAGCATCTCAATTACCTGGAAGAACAGACAATGAGATTAAGAACTATTGGAACACTCATCTAAAGAAACGTCTCCTTCGATCATGTCCTTCCCTAAGAGCAAAACAGCCATTAGTCATTCCTGATCGAACCATTGTCAAGTCTGAATGTCCTTCCACTCGGCACATGGTACAGTGGGAAAGTGTTAGAGTTGAGGCTGAGGCAAGGTTGTCAATGGAATCTTCGATGCTCAATTCGTGGCCAACTAGTAAAACATGCCCTGATCACTTTCTTCAACTTTGGCATTCTGAGGTTGGAAAGTCATTTCGCATGATCAAGGGAAAGGAAGAACTAGTGTGTCAAAGTTTTGTCTCACAACCTTCTTCCTCATCAAAATTGGAGTCATGTTCAGATGTGTCACTGCAGGTGAAAAACACAGGAACTAGTAGTAGCAATCCAAATCTTGAAGATATGAACATGGTCCATGAACAAACAAGTAGCTACAAACCAAAGCTTGATGATGACACAGCTGGGTCTGACTCAGGCAATTATGAATTTCTTGATACTTCTGATTCTGCTCTAAAGCACCTACTACATATGCCTGATAGTGATATAGGATTCTTGGGACAGAATGATAATTTCCTAAATCTCCTTGATGGTACAAGTGACTAA 1026 0.4084 KGAWTPEEDQALVDYIKKNGHGSWRTLPNMQVQFLSHFLLLCFCISCKLFFLFLFPTFLRRICLFFSVTQVFIFLKILGLLRCGKSCRLRWINYLRPGIKRGPFTSEEERTIVQLHGMLGNRWAAIASQLPGRTDNEIKNYWNTHLKKRLLRSCPSLRAKQPLVIPDRTIVKSECPSTRHMVQWESVRVEAEARLSMESSMLNSWPTSKTCPDHFLQLWHSEVGKSFRMIKGKEELVCQSFVSQPSSSSKLESCSDVSLQVKNTGTSSSNPNLEDMNMVHEQTSSYKPKLDDDTAGSDSGNYEFLDTSDSALKHLLHMPDSDIGFLGQNDNFLNLLDGTSD 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02985 341 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 281 - -
Pste4g02985 341 CDD SANT 3 30 IPR001005 -
Pste4g02985 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 25 IPR017930 -
Pste4g02985 341 SUPERFAMILY Homeodomain-like 1 30 IPR009057 -
Pste4g02985 341 Gene3D - 103 150 - -
Pste4g02985 341 MobiDBLite consensus disorder prediction 282 301 - -
Pste4g02985 341 ProSiteProfiles Myb-like domain profile. 96 146 IPR001005 -
Pste4g02985 341 CDD SANT 103 146 IPR001005 -
Pste4g02985 341 Gene3D - 1 100 - -
Pste4g02985 341 SMART sant 1 97 IPR001005 -
Pste4g02985 341 SMART sant 100 148 IPR001005 -
Pste4g02985 341 SUPERFAMILY Homeodomain-like 82 150 IPR009057 -
Pste4g02985 341 ProSiteProfiles Myb-like domain profile. 1 95 IPR001005 -
Pste4g02985 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 150 IPR017930 -
Pste4g02985 341 FunFam MYB transcription factor 103 150 - -
Pste4g02985 341 Pfam Myb-like DNA-binding domain 101 146 IPR001005 -
Pste4g02985 341 Pfam Myb-like DNA-binding domain 1 27 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02985 Pste-Chr4 21242513 21244171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02985 1 329 MYB Transcription Factor Family AT3G61250 44.940 2.66e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste4g02985 Myb_DNA-binding 1.1e-14 CL0123