Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02978 ATGCAACGTTATCACCATCAGCAGCATTTTGCTTTCTTCTTTTTCCTTGTTTATTTTGGTGTCACAGTTTGTCTAAACTCCGATGGCCTCGCCTTGATGGCTCTGAAAGCCGCGATATCAGTGGACCCCACAGGAGCCCTAACAAGCTGGTGGGAAGCCTCCGAAACACCGTGCAACTGGGCCGGAGTGACCTGCAAGCACAGGCGCGTGACCCAAATAAGCCTGAACTCGAGGGGCCTAACGGGCTACCTCCCGTCGGAACTGGGCCTGCTGGCCCATCTCAAACGCCTAACTCTCTCCCACAACAACCTCTCCCACGCAATCCCCGTCACGCTCTTCAACGCCACCACGCTCCTCGTTCTCGACCTCTCCCACAACAGCCTCACGGGCCCACTTCCCCTCTCAGTTTCGCACCTTAAAAACCTCGTCCACTTCGACGTTTCCTCCAACGCTCTCTCCGGTCACCTCCCAGTCACCCTCGCATTGCTCGTTTCGCTATCGGGCACGCTCAACCTCTCTTACAACAACTTCACCGGGAGTATCCCGTTCCAATTCGGGTCTCTCCCGGTCACCCTCAGCCTCGACCTACGCTACAATAACTTAACCGGACAAATCCCTCAAGTGGGGTCCTTACTCAACCAGGGCCCCACCGCTTTCTCTAACAACCCCAATCTATGCGGTTTCCCCATGCAAAACGCGTGTCCCGAGTCTGTTCAAATCCCGAACCTAACCAACCCGAATCTAACAAACCCGAACCGAGCCCCGAACCGGGACCGCGGGGGTGCGCTTTTCGTCTGCGTCATTGCCACGGTGGCGCTCTCCGGCGTCGTTTTATGCTCCGTCGTGGTTATTTTGCTTCTCCGGAAGGGTTTCGGGGAGGGGCAAATTGGGAAAGGGGAGGGTGAGAATAACGCGGAGAGCGAGGAGAAGGGGAGATTTGTGGTGATTGGCGATGAATTAGGGTTTGAGTTGGAGGATTTGTTGAGAGGCTCCGCGTACGTGATGGGGAAGAGTGGGAGTGGGATTTTGTACAAGGTCGTCGGGGTTGGGAAACGTGCTGCGGCGGCGGAGACGGTGGTGGCGGTGAGGAGGCTCGGCGAGGACGGTGGCGCGTGGCCGTTGAAGGAGTTTGAGGCGGAGGTGGAGGGTGTTGCCAGAGTTAGGCATCCCAATGTGGTCGCTTTGAGAGCGTATTACTATGCCAGAGAGGAGAAGCTTCTCGTCACGGATTTCGTTCGCAACGGAAACTTGCACACCGCGTTGCATGGTAATGATAATGGTCCAATGGTTATAATGGCCTATATTGATTCTAGGGTGCGTCCACAGTTGCTCTTAATGCCATGCTCGTGGGGTGAGGTGGTCCTCAAATTCTACTTACTGTTAATTGAGGCATTTCTCTGCGATGTGTTTGGTGGTTTCTCGGTTTCAGGTGGGCCTTCCAATTCATTTTCACCACTATCATGGGCAGCAAGGTTAAAAATTGCTCAAGGAGCTGCTAGTGGCTTAACCTACATACACGAGTTCAGTGGTAGAAAATATGTCCATGGAAATCTTAAATCAACCAAAATCCTTCTGGATGAGGATCTAAATCCTTACATATCTGGTTTTGGACTTACCCGTTTGGGTATAGGTACCTCAAAGTCTCCCACATCAGCACCAAAACAGCTTAGTTCAAACCGCTCAATGACAACATCAGCAATTGGTTCAAATTCAAACATTTCAGCTTCCTCTAACATCTACTTGGCACCAGAGGTGCGAATAGCTTGTGGAAAATTCACTCAGAAATGTGACGTGTATTCTTTTGGTATAGTGCTATTAGAGCTTTTGACAGGTAGGCTTCCAGAATTAGGAGCTGAAAGCGATAGCGTGGAGCTAGAGAGTTTTGTGAGGAAAGCATTCAGTGAGGAGAAGCCCTTGTCAGAGATTATAGACCCTGCACTTCTGCCTGAGGTTTATGCTAAAAAGCAAGTTATTGCAGTGTTTCATGTTGCACTAAACTGCACAGAACTTGATCCAGAATTGCGACCAAGAATGAGAACCGTCTCTGAGACCCTTGATCGAATCAAAATACAGTGA 2076 0.5111 MQRYHHQQHFAFFFFLVYFGVTVCLNSDGLALMALKAAISVDPTGALTSWWEASETPCNWAGVTCKHRRVTQISLNSRGLTGYLPSELGLLAHLKRLTLSHNNLSHAIPVTLFNATTLLVLDLSHNSLTGPLPLSVSHLKNLVHFDVSSNALSGHLPVTLALLVSLSGTLNLSYNNFTGSIPFQFGSLPVTLSLDLRYNNLTGQIPQVGSLLNQGPTAFSNNPNLCGFPMQNACPESVQIPNLTNPNLTNPNRAPNRDRGGALFVCVIATVALSGVVLCSVVVILLLRKGFGEGQIGKGEGENNAESEEKGRFVVIGDELGFELEDLLRGSAYVMGKSGSGILYKVVGVGKRAAAAETVVAVRRLGEDGGAWPLKEFEAEVEGVARVRHPNVVALRAYYYAREEKLLVTDFVRNGNLHTALHGNDNGPMVIMAYIDSRVRPQLLLMPCSWGEVVLKFYLLLIEAFLCDVFGGFSVSGGPSNSFSPLSWAARLKIAQGAASGLTYIHEFSGRKYVHGNLKSTKILLDEDLNPYISGFGLTRLGIGTSKSPTSAPKQLSSNRSMTTSAIGSNSNISASSNIYLAPEVRIACGKFTQKCDVYSFGIVLLELLTGRLPELGAESDSVELESFVRKAFSEEKPLSEIIDPALLPEVYAKKQVIAVFHVALNCTELDPELRPRMRTVSETLDRIKIQ 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02978 691 Gene3D Ribonuclease Inhibitor 166 236 IPR032675 -
Pste4g02978 691 SUPERFAMILY Protein kinase-like (PK-like) 334 688 IPR011009 -
Pste4g02978 691 SUPERFAMILY L domain-like 23 231 - -
Pste4g02978 691 FunFam Leucine-rich repeat receptor-like protein kinase 141 236 - -
Pste4g02978 691 FunFam Leucine-rich repeat receptor-like kinase 30 140 - -
Pste4g02978 691 Pfam Protein tyrosine and serine/threonine kinase 352 685 IPR001245 GO:0004672|GO:0006468
Pste4g02978 691 Gene3D Transferase(Phosphotransferase) domain 1 479 691 - -
Pste4g02978 691 Pfam Leucine rich repeat 93 152 IPR001611 GO:0005515
Pste4g02978 691 Gene3D Transferase(Phosphotransferase) domain 1 328 437 - -
Pste4g02978 691 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 689 IPR046959 -
Pste4g02978 691 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Pste4g02978 691 Gene3D Ribonuclease Inhibitor 24 165 IPR032675 -
Pste4g02978 691 ProSiteProfiles Protein kinase domain profile. 329 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02978 Pste-Chr4 21190781 21195731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02978 25 689 Receptor kinase-like Gene Family AT3G57830 49.353 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste4g02978 PK_Tyr_Ser-Thr 1.5e-23 CL0016