Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02966 ATGAAAGATCCTTGAATATGTTTTGTTTGGAAGGAATAAGGAAAGGAGGGAGGAGGGAGAAAAAAGAAAGAAAAGTGTGTGTAAATTTGTGTTAGGGTGGGGGCGTCGGCGGAAGAAAGCGTTGGGGAGAGAGATGGTTAGCCAAAGGCAGCGAGTGGCGCGGAAGCGATACAAAGCAGAGCACCCTGAGCTGTTTCCGAAGGCCGAACCCACACACCCTAAAGAGCCTGAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAACGGCGCTTTCAAGCGCAACTCAAAACCCGGCTTCAGAAAACACCCTCTCAGAGTCCCCGGCATGAAGCCCGGCGATAGCTGTTTCATCTGCAAGGCCAAGGACCACATCGCCAAGCTCTGTCCCCAGAAATCCGAATGGGACAAAAACAAGATTTGTTTGCGCTGTCGACGCCGCGGTCATAGAGCTATGAACTGCCCTGAGGTGCAAGACCACGCCATTGATGCCAAGTTTTGTTATAACTGTGGCGAAACCGGTCACTCTCTCACTCACTGTCCGCTCCCTCTTCAGGAAGGAGGGACAAAGTTTGCTGAGTGCTTTGTCTGTAATCAGCGTGGACACTTGAGTAAAAACTGTCCTCAAAATACTCGCGGAATTTATCCCAAGGGTGGCTGCTGTAAAATATGTGGTGGTGTGACACATTTGGCAAAGGATTGTTCTGACAAAGGGAAGAGAGGATCTGTTGCTGCTAGCGGGCGTGTTGATGGATGGATGAGACCTGAAGAGAGGCCCAGTGGCCAGGTTACCAAATTTGTCAGTGGGGATGATATGGAGGATGACTTCATGACAGATGACATACATAGTGGAGACAAGAAAAGTCAGCAAAGTCAACAGATGATTTTGTAAAACCAAAGAAGAAGGGTCCTAAAGTTGTGAACTTTTAATTAAGGATGGTTCACTCTTACTGTATTGTGTTGATATTGGTTTCACTCTCCATTTTTATTCCTATTCATCCACAAGGTAGTAAGACCTGTGCTATTCGTTGCAATGTGCAGAATCTCTTCCAGAATGAATGTAATCGCTCCTGCAAAGTCTTGGGTTGCCTAAAAGTTTGGAGAATTGACATGTAAACTAATAGTATCGCGTCTCGTTGCTGATCATATAAATTCACCAGTTTTATAAAAGATAATTAAAAATGTAACAATATTTTTTGGTACAATTGCTA 1205 0.4498 MVSQRQRVARKRYKAEHPELFPKAEPTHPKEPEKKKKKKKKRNGAFKRNSKPGFRKHPLRVPGMKPGDSCFICKAKDHIAKLCPQKSEWDKNKICLRCRRRGHRAMNCPEVQDHAIDAKFCYNCGETGHSLTHCPLPLQEGGTKFAECFVCNQRGHLSKNCPQNTRGIYPKGGCCKICGGVTHLAKDCSDKGKRGSVAASGRVDGWMRPEERPSGQVTKFVSGDDMEDDFMTDDIHSGDKKSQQSQQMIL 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02966 250 ProSiteProfiles Zinc finger CCHC-type profile. 95 110 IPR001878 GO:0003676|GO:0008270
Pste4g02966 250 SUPERFAMILY Retrovirus zinc finger-like domains 63 111 IPR036875 GO:0003676|GO:0008270
Pste4g02966 250 MobiDBLite consensus disorder prediction 1 59 - -
Pste4g02966 250 MobiDBLite consensus disorder prediction 12 32 - -
Pste4g02966 250 ProSiteProfiles Zinc finger CCHC-type profile. 148 163 IPR001878 GO:0003676|GO:0008270
Pste4g02966 250 ProSiteProfiles Zinc finger CCHC-type profile. 121 135 IPR001878 GO:0003676|GO:0008270
Pste4g02966 250 Pfam Zinc knuckle 148 163 IPR001878 GO:0003676|GO:0008270
Pste4g02966 250 Pfam Zinc knuckle 121 135 IPR001878 GO:0003676|GO:0008270
Pste4g02966 250 PANTHER OS04G0555800 PROTEIN 1 246 - -
Pste4g02966 250 MobiDBLite consensus disorder prediction 207 250 - -
Pste4g02966 250 FunFam Zinc finger CCHC-type-containing 9 145 197 - -
Pste4g02966 250 Gene3D - 63 117 - -
Pste4g02966 250 SMART c2hcfinal6 69 85 IPR001878 GO:0003676|GO:0008270
Pste4g02966 250 SMART c2hcfinal6 147 163 IPR001878 GO:0003676|GO:0008270
Pste4g02966 250 SMART c2hcfinal6 120 136 IPR001878 GO:0003676|GO:0008270
Pste4g02966 250 SMART c2hcfinal6 94 110 IPR001878 GO:0003676|GO:0008270
Pste4g02966 250 SMART c2hcfinal6 174 190 IPR001878 GO:0003676|GO:0008270
Pste4g02966 250 MobiDBLite consensus disorder prediction 33 55 - -
Pste4g02966 250 SUPERFAMILY Retrovirus zinc finger-like domains 115 164 IPR036875 GO:0003676|GO:0008270
Pste4g02966 250 Gene3D - 118 168 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02966 95 170 C2H2 Transcription Factor Family AT5G20220 37.037 2.23e-06 46.2