Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste4g02965 | TATTAATGGCTGATTTTGGTGACTATTTTGTGTTGCTTCTCATATGGCTATGCTCAATCTTCTTGTTACGTTTAATCCTCACAAAGTCTCGCATGAAGGCACAACTACCACCAAGTCCCAGAGCCATTCCTGTGTTAGGGCATCTCTACCTTCTCACAAAGCTACCCCACCAAGCATTTCACAACATCTCATCACGTTATGGCCCTTTGGTCTATCTCTTGTTTGGTTCCAAACCCTGTGTTCTTGTTTCATCACCTGAAATGGCAAGAGAGTGCCTCAAAAATCATGAAACATGTTTCCTAAACCGACCAAAAAGAACCAATTTGGACTACATCACATATGGTTCTTCAGATTTTGTGTTGGCACCCTATGGACCCTATTGGAGGTTCATGAAAAAGCTTTGCATGACTGAACTTCTAGGAGGTCGCATGATTCACCAGCACCTTCCCATTAGAGAAGAGGAGACAAAGCTGTTCTTGAAGAGTATGATGCAAAAGGCTGATTTGCGAGAGGAAGTGAACATAGGCAAGGAGCTAGCCATGTTGTCAAATAACATAATCACAAGAATGGCTTTGGGAAGAAGGTGTTGTGATGTTGAAGGGGAGGGGCACCAATTGATTGAGTTGGTGAAAGAGATGACTGAGCTTGGTGGGAAGTTCAACTTGGGAGACATGCTGTGGTTTGTTAAGAGGTTGGATTTGCAGGGGTTTGGTAAAAGGCTTGAGAGTGTTAGAAGCAGGTATGATGCCATAATGGAGAAGATCATGAAGGAACATGAAGATGCAAGAAAGAAGAATAAGCAGGAAATGGGTGGTGATGGAGATGAAAAAACAGTGAGGGATTTGCTTGATATTCTTCTTGATATCTATGCTGATGAAAGTTCAGAGATTAGATTAACCAGAGAAAACATAAAGGCCTTCATCATGAACATGTTTGGTGCTGGAACTGAGACATCAGCCACTACAATTGAATGGGCTTTGGCAGAGCTAATAAATCATCCAGAAATGATGTCAAAAGCTAGAGAAGAGATTGATTCAGTGGTTGGTAAGAATAGATTGGCAGAGGAATCAGATATTCCCAACCTTCCCTATGTTCAATCCATAGTGAAGGAAACAATGAGGCTTCACCCCACTGGGCCCCTAATAGTGAGACAATCCACTGAAGATTGTAATGTTAATGGATATGAAATTCCAGCAATGACCACAGTGTTTATAAATGTATGGGCCATAGGTAGGGACCCAAACTATTGGGAAAACCCACTTGCGTTCAAGCCAGAGAGGTTCTTAAATGAAGAGGGAGAGAGTGTGTTGGATTTGAAGGGGCAGCATTTTGAACTTTTGTCATTTGGAGCTGGGAGAAGAAGCTGCCCTGGTGCTTCACTAGCTTTGCAAATTATTCCCACCACTTTAGCTGCAATGATTCAGTGTTTTGAATGGAAGGTTGGTGAAGAAGGGAACGAAATTCTTGACATGCAAGAGGGACCAGGAATGGCACTTCCTAGGGCACATCCCTTGCTTTGTTTTCCTAGTCTCTCAAATCGTTATGGACCCTTGATTCACCTCTACCTTGGCTCCACTCCCATTGTTGTTGTTTCTTCTTCAGAAATAGCCAAAGAAATCTTCAAAACCCATCAACTTTATTTCTCCAACAGACCAGCTAATGTTGCTATTAACTATCTTACTTACAACTTGTCTGATCTAGGGTTTGCCCCTTATGGACCCTATTGGAAGTTCTTGAAGAAACTTTGCATGTCAGAACTTCTTAATGGGAAGATGCTTGACCAACTCCTACCCATTAGACAAGACGAGATACACAGGTTTGTGATGAAGATGAAAATGAAAGGGGAAGCATGTGAGAGTGTGAATGTTGGAGATGAGTTTTTGAAGCTAACAAACAGTATAGTGATGAGAATGGCAATAGGGAAAAGCTGTTTCAACTCTGATGATGAGGCTCACAAGGTCACAGAAAGGGTCAAGGAGTCTTCCAAGATTAGTGGAATGTTTAATCTTGAAGATTACTTTTGGTTTTGTAAGGGGTTAGATCTTCAGGGAATTGGGAAGAAGCTGAAGGAGGTTCGTGAGAGGTTTGATACCATGGTGGAGTGTATCATTCGGGAACATGAAGAGGTGAGAAATAAATTGACTGATAAAAAGAATGCTCCAAGAGATGTTCTTGATGTTCTTTTGAGTATTTATGAAGATCAAAGCTCAGAGGTGAAAATAACCAGAGACAACATTAAAGCCTTCTTGGTGGATATGTTCACAGGTGGGACAGATACAACTGCTGTTACCCTAGAATGGTCACTGGCAGAACTAATTAACCATCCAACAGTCATGGAGAAAGCAAAGAAGGAAATTGACTCTATAATAGGTAAAGAAAGAATAGTAATGGAATTAGACATAGAAAATCTTCCTTATCTCCAAGCAATAGTGAAAGAAACACTGAGGCTTCACCCTCCATCTCCATTTGTATTAAGAGAATCAACCAAAACTTGCACCATTGCTGGATATGACATTCCATCAAAGACTCAAATTTTCACCAATGTATGGGCTATTGGTAGGGATCCAAAGCATTGGGATGACCCTCTTGAGTTTAGGCCAGAAAGGTTTGTGAGAAAAGATAATGAGGGTGGAAAAATAAAGGGCCAAGTTGATGTGAGGGGACAACATTATCAGCTTTTGCCTTTTGGGAGTGGAAGAAGAGGGTGTCCTGGAACTTCACTTGCTCTCAAGGTTGCTCACACCACCCTCGCTGCTATGATTCAATGCTTTGAATGGAAGGTTGGAGAAGAAGAAGATGATGGAGGGAATTGTGGTAGAGTTGACATTAAAGAGGGACCTGCTTTTATTCTTTCAAGAGCTCAACCCTTGATTTGTGTACCAAAACCAAGACTCATGCCATTATTCCCTTTGTGTCATGGTGAATGC | 2927 | 0.4154 | MADFGDYFVLLLIWLCSIFLLRLILTKSRMKAQLPPSPRAIPVLGHLYLLTKLPHQAFHNISSRYGPLVYLLFGSKPCVLVSSPEMARECLKNHETCFLNRPKRTNLDYITYGSSDFVLAPYGPYWRFMKKLCMTELLGGRMIHQHLPIREEETKLFLKSMMQKADLREEVNIGKELAMLSNNIITRMALGRRCCDVEGEGHQLIELVKEMTELGGKFNLGDMLWFVKRLDLQGFGKRLESVRSRYDAIMEKIMKEHEDARKKNKQEMGGDGDEKTVRDLLDILLDIYADESSEIRLTRENIKAFIMNMFGAGTETSATTIEWALAELINHPEMMSKAREEIDSVVGKNRLAEESDIPNLPYVQSIVKETMRLHPTGPLIVRQSTEDCNVNGYEIPAMTTVFINVWAIGRDPNYWENPLAFKPERFLNEEGESVLDLKGQHFELLSFGAGRRSCPGASLALQIIPTTLAAMIQCFEWKVGEEGNEILDMQEGPGMALPRAHPLLCFPSLSNRYGPLIHLYLGSTPIVVVSSSEIAKEIFKTHQLYFSNRPANVAINYLTYNLSDLGFAPYGPYWKFLKKLCMSELLNGKMLDQLLPIRQDEIHRFVMKMKMKGEACESVNVGDEFLKLTNSIVMRMAIGKSCFNSDDEAHKVTERVKESSKISGMFNLEDYFWFCKGLDLQGIGKKLKEVRERFDTMVECIIREHEEVRNKLTDKKNAPRDVLDVLLSIYEDQSSEVKITRDNIKAFLVDMFTGGTDTTAVTLEWSLAELINHPTVMEKAKKEIDSIIGKERIVMELDIENLPYLQAIVKETLRLHPPSPFVLRESTKTCTIAGYDIPSKTQIFTNVWAIGRDPKHWDDPLEFRPERFVRKDNEGGKIKGQVDVRGQHYQLLPFGSGRRGCPGTSLALKVAHTTLAAMIQCFEWKVGEEEDDGGNCGRVDIKEGPAFILSRAQPLICVPKPRLMPLFPLCHGEC | 974 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste4g02965 | 974 | Pfam | Cytochrome P450 | 35 | 505 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02965 | 974 | Pfam | Cytochrome P450 | 501 | 931 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02965 | 974 | FunFam | Cytochrome P450 family protein | 26 | 505 | - | - | |
| Pste4g02965 | 974 | PRINTS | P450 superfamily signature | 312 | 329 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02965 | 974 | PRINTS | P450 superfamily signature | 807 | 818 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02965 | 974 | PRINTS | P450 superfamily signature | 892 | 901 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02965 | 974 | PRINTS | E-class P450 group I signature | 301 | 318 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02965 | 974 | PRINTS | E-class P450 group I signature | 901 | 924 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02965 | 974 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02965 | 974 | PRINTS | E-class P450 group I signature | 180 | 198 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02965 | 974 | PRINTS | E-class P450 group I signature | 321 | 347 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02965 | 974 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02965 | 974 | PRINTS | E-class P450 group I signature | 891 | 901 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02965 | 974 | PRINTS | E-class P450 group I signature | 846 | 870 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02965 | 974 | PRINTS | E-class P450 group I signature | 806 | 824 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02965 | 974 | Gene3D | Cytochrome P450 | 499 | 962 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02965 | 974 | SUPERFAMILY | Cytochrome P450 | 497 | 962 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02965 | 974 | FunFam | Cytochrome P450 family protein | 506 | 957 | - | - | |
| Pste4g02965 | 974 | Gene3D | Cytochrome P450 | 20 | 498 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02965 | 974 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 9 | 503 | - | - | |
| Pste4g02965 | 974 | CDD | CYP93 | 514 | 959 | - | - | |
| Pste4g02965 | 974 | CDD | CYP93 | 66 | 507 | - | - | |
| Pste4g02965 | 974 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 447 | 456 | IPR017972 | GO:0005506|GO:0016705 | |
| Pste4g02965 | 974 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 894 | 903 | IPR017972 | GO:0005506|GO:0016705 | |
| Pste4g02965 | 974 | SUPERFAMILY | Cytochrome P450 | 35 | 505 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste4g02965 | Pste-Chr4 | 21112753 | 21123026 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste4g02965 | 498 | 959 | Cytochrome P450 | AT5G06900 | 46.567 | 2.20e-146 | 443 |