Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste4g02963 | ACAGCATATATAATACAATAGTTTTATGAGGTTGTTCCAATTAATTAACAATGGCTGAAACTAAAGAATATCTCCAACTCTTTCTTCTATGGCTGGTCTCCACCATCTGCATCCGCTTCATACTGACCAAAACGCGGCGGCAGCCGAGTCGTCCGCCGGGGCCAGCGGCCCTGCCGGTGATCGGGCACCTGCACCTGATCTCGTCCCTGCCGTACCGCTCCTTCCACGCGCTCTCGACGCGCTACGGGCCCATCATGCAGATCTTCTTGGGGTCCGTGCCATGCGTCGTCGTTTCGTGCCCCGAACTGGCGAAGGAGTTCCTTAAAACGCACGAGCAGAGCTTCACGAACCGGTTCATCAGCGAAGCGGTTCACCGGTTGTCGTACGGTTCGAAAGGGTTCCTGTTCGCGCCGTACGGAAGGTACTGGAAGTTCATGAAGAAGATCTGCATGTCGGAGCTTCTCGGGGGACGCACCCTCGACCAGTTACTCCACGTCAGGGAACAAGAAACCCTCAGGTTCCTGCGCGTGTTGAAGGCGAAAGGGGAGGCGCGTGAGGCTGTTAATGTTGGAGGGGAGTTGATGACTTTGACCAACAGTGTAATATCAAGGATGCTTTTGAATCGAACGTGTTGTGAGAACAATGATGATGACATGGAGGATGTGAGGAAGATGGTGGAGGACACTGCTGAGCTGGCAGGGAAGTTTAATGTGGCAGATTTTGTTTGGTTTTGTAAAGGGTTGGATTTGCAAAGGATGAACAAGAGGCTTGGGGAGATTTTGGAGAGGTTTGATTGCATGATGGAGAGGGTGATGAAGGAGCATGAGGAGGAAAGGAAGAGAAGAAAAGAAAGAGGGGAAGAGAAGAAGATTAGGGATTTGCTTGATATTTTGTTGGATATTCATGAAGATGACAACATGGAGATGAAGTTGAGTAGAGAGAATGTCAAGGCTTTCATATTGGACATATTCATGGCAGGTACAGACACATCAGCAATAACCATAGAATGGGCCCTAGCAGAGTTAATCAGTAACCCACACGCAATGCAGAAAGCAAGAGAAGAGATAAGTTCTGTGACAGAAAACAATAGCAGACTGATACAAGAGTCAGACCTGAGCAACCTTCCATACATTCGAGCCATAGTAAAAGAAACCCTCAGACTCCACCCCACATCCCCCTTCTTAGGGAGAGAAGCCTCAGAAGATTGCAATGTCTGCGGCTACGACATTCCCCAAAAGTCACTGCTCTTCGTTAATCTCTGGGCCATGGGAAGGGACCCTAAGCTGTGGGGTGAGAATGCCCTAGAGTTCAGGCCAGAGAGGTTCATGGATGGTGAGAAGAAGCAGTTTGATGTGAAGGGGCAATGTTTTCAGCTGATGCCATTTGGGACTGGGAGAAGGGTCTGTCCAGGGATGACTCTTGCGCTGCAAGTTGTCCCCACTAACCTTGCTGCTATGGTTCAGTGTTTTGACTTTAGGGTTGATGGGGTTATTAGTATGGATGAGAAACCCGCCATGACTCTTCCTAGGGCACAGCCTTTGATCTGTGTCCCTCTGCCTCGCTTGTCACTTTCCTTCTAGTGATCTCAGGAATTTGGATCCTCTTCTACGGTTTTTCTCTCTAACAGTTGAATTTGGATTTCTTCTACAATTTTTCACTCCAATGGAGAGAAGAACTCCAGGAGAGATCTAGATTCTGATATGTATTAATAGATAATGCTTCAACACCTATTTATGTGAGAAATATAGGATGAATTAATTACCAAGAATAATGAGAGTGAAAGTGATATATCATATGTAGTCATTTAATACTATTATAAATTTTATTTCATAAATTTCAACTTGATTTCATTTA | 1854 | 0.4644 | MAETKEYLQLFLLWLVSTICIRFILTKTRRQPSRPPGPAALPVIGHLHLISSLPYRSFHALSTRYGPIMQIFLGSVPCVVVSCPELAKEFLKTHEQSFTNRFISEAVHRLSYGSKGFLFAPYGRYWKFMKKICMSELLGGRTLDQLLHVREQETLRFLRVLKAKGEAREAVNVGGELMTLTNSVISRMLLNRTCCENNDDDMEDVRKMVEDTAELAGKFNVADFVWFCKGLDLQRMNKRLGEILERFDCMMERVMKEHEEERKRRKERGEEKKIRDLLDILLDIHEDDNMEMKLSRENVKAFILDIFMAGTDTSAITIEWALAELISNPHAMQKAREEISSVTENNSRLIQESDLSNLPYIRAIVKETLRLHPTSPFLGREASEDCNVCGYDIPQKSLLFVNLWAMGRDPKLWGENALEFRPERFMDGEKKQFDVKGQCFQLMPFGTGRRVCPGMTLALQVVPTNLAAMVQCFDFRVDGVISMDEKPAMTLPRAQPLICVPLPRLSLSF | 509 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste4g02963 | 509 | CDD | CYP93 | 66 | 501 | - | - | |
| Pste4g02963 | 509 | Coils | Coil | 332 | 352 | - | - | |
| Pste4g02963 | 509 | PRINTS | E-class P450 group I signature | 362 | 380 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02963 | 509 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02963 | 509 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02963 | 509 | PRINTS | E-class P450 group I signature | 298 | 315 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02963 | 509 | PRINTS | E-class P450 group I signature | 442 | 452 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02963 | 509 | PRINTS | E-class P450 group I signature | 403 | 427 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02963 | 509 | PRINTS | E-class P450 group I signature | 318 | 344 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02963 | 509 | PRINTS | E-class P450 group I signature | 452 | 475 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02963 | 509 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 10 | 498 | - | - | |
| Pste4g02963 | 509 | SUPERFAMILY | Cytochrome P450 | 29 | 504 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02963 | 509 | Pfam | Cytochrome P450 | 35 | 495 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02963 | 509 | Gene3D | Cytochrome P450 | 27 | 505 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02963 | 509 | FunFam | Cytochrome P450 family protein | 26 | 499 | - | - | |
| Pste4g02963 | 509 | PRINTS | P450 superfamily signature | 443 | 452 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02963 | 509 | PRINTS | P450 superfamily signature | 309 | 326 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02963 | 509 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02963 | 509 | PRINTS | P450 superfamily signature | 452 | 463 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste4g02963 | 509 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 445 | 454 | IPR017972 | GO:0005506|GO:0016705 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste4g02963 | Pste-Chr4 | 21093428 | 21098821 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste4g02963 | 1 | 504 | Cytochrome P450 | AT5G06900 | 47.628 | 1.86e-167 | 481 |