Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02957 GAAGCTTTGTCTTTTGTATAGCAGCATTCAATTCTATTTTCTCTCTTCATTACACCACTCTCTATAACCATTTGATCATAACCTTATAAACAGACTCATTACTCTCTCTCTCTCTCCCTCTTTGAGTTGAGAAAGGAAATGGTTTCAAGTGAAAAAATCAGAAGGCGGTTTCACCATTAATGGGGTTCTCAATAGCTATTGAGTTAGAAGAGCAACGACAAGAGCAAGAGACAAAGGTTTTAGGTTCTTCTCTGAATATCATGGCTTCTTCAAGTGTTAAGAGCAACAACTCAACAACTCAACTTGAACCACTCCCACCACCCTCACATCTTCATCATCAACAACCACAGCATCATTTTCATCATCATCAAATACCAGACCAACAAATCTCTTTTGGGATGATGCCATCTTCCTCATCATCAGCCTCTATTCCTGGAAATTACTTGAGTAAAGATTCTGGAGCTTATGATTTGGGGGAATTGGATCAAGCCTTTTTTCTGTATCTTGATGGTCAGGGTGACCCTTCTAGTGTTCAAGACCAAAGACAGAACTCATCATCAGGAATGAGGCCACCACCAACTCTCAACATTTTCCCTTCTCAACCTATGCACGCAGTGCCACCATCCAATTCCAAGGTTAACATGGAACTACCCTCCACACAAACTGACTCCAAGAAACCACCAGAATCATCCATGGCCAAACCCAACCCACACACTGAAGCCCCCTCTGCACCTGAAGCACCAAAATCTGTAAAGCGAGAGGGAAATCGCAAGGGAACAACATCAAGTTCTGAGCAGGATGCACCAAAGACACCAGATCCTAAGACACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCAAGGAAAAGCAGGCTCAGAAAAAAGGCTTATGTTCAGCAGCTAGAGTCTAGTAGGATTAAGCTTAATCAGCTAGAACAAGAGTTACAACGTGCAAGAGCTCAAGGCATGTTAATGGGTGGAACTGCACTTCTGGGAGGGGAGCAAGGCTTTCCAATGGCTATGAGTGGCATTAGTTCTGAGGCTGCAATGTTTGACGTGGAATATGCAAGATGGTTAGAGGAGCACCACCGAATAGTGTGTGAGTTAAGAGCTGCAGTTCAAGAACACATTCATGAAAATGAGCTTAGGTTATATGTGGAAAATTGTTTGGCTCACTATGACCAAGTAATGAACCTGAAGAGCATAGTAGCCAAAACAGATGTTTTTCATCTTGTTTTTGGAATGTGGAAAACCCCAGCTGAACGTTGTTTCATGTGGATTGGTGGCTTCAGACCTTCTGAACTCATCAAGATTATACTGGGTCAAATTGAGCCTCTTACTGAGCAACAAATACTTGGGATATGTGGGTTGCAACAATCTACACAAGAAGCAGAAGAGGCTCTTTCACAAGGGCTTGATGCCCTTAACCAATCTCTCTCGGACACCATAACTTCAGACTCTTTGTGGTGCCCTCCACATATGCCTAACTATATGGGACAAATGGCTGTGGCAATGAACAAACTCTCCACTCTTGAAAGTTTTGTGAGACAGGCTGATAATCTGAGGCACCAAACAATCCACCGTCTGCATCAGCTTCTAACAACACGCCAAGCTGCGAGGTGTTTGGTGGCCATTTCAGAGTACTTTCATCGTCTAAGAGCCCTTAGTTCTCTGTGGTTGACACGTCCTCGCCAAGAGTAGAGAGAGTGGTGGTAGTGTTAATTGCTACATTGCATAACCCAAGTTATGGCTATATGACCTTGTAGCTTCTTAATTTCTCTTGAATTATAAATTAAATATTCTCTGGTGCCACCCTCTTCATCTT 1824 0.4298 MGFSIAIELEEQRQEQETKVLGSSLNIMASSSVKSNNSTTQLEPLPPPSHLHHQQPQHHFHHHQIPDQQISFGMMPSSSSSASIPGNYLSKDSGAYDLGELDQAFFLYLDGQGDPSSVQDQRQNSSSGMRPPPTLNIFPSQPMHAVPPSNSKVNMELPSTQTDSKKPPESSMAKPNPHTEAPSAPEAPKSVKREGNRKGTTSSSEQDAPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLEQELQRARAQGMLMGGTALLGGEQGFPMAMSGISSEAAMFDVEYARWLEEHHRIVCELRAAVQEHIHENELRLYVENCLAHYDQVMNLKSIVAKTDVFHLVFGMWKTPAERCFMWIGGFRPSELIKIILGQIEPLTEQQILGICGLQQSTQEAEEALSQGLDALNQSLSDTITSDSLWCPPHMPNYMGQMAVAMNKLSTLESFVRQADNLRHQTIHRLHQLLTTRQAARCLVAISEYFHRLRALSSLWLTRPRQE 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02957 506 Pfam Seed dormancy control 306 379 IPR025422 GO:0006351|GO:0043565
Pste4g02957 506 SMART brlzneu 211 264 IPR004827 GO:0003700|GO:0006355
Pste4g02957 506 FunFam BZIP family transcription factor 214 263 - -
Pste4g02957 506 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 218 233 IPR004827 GO:0003700|GO:0006355
Pste4g02957 506 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 213 257 IPR004827 GO:0003700|GO:0006355
Pste4g02957 506 MobiDBLite consensus disorder prediction 112 218 - -
Pste4g02957 506 SUPERFAMILY Leucine zipper domain 215 257 IPR046347 GO:0003700|GO:0006355
Pste4g02957 506 Coils Coil 234 261 - -
Pste4g02957 506 MobiDBLite consensus disorder prediction 32 64 - -
Pste4g02957 506 Pfam Basic region leucine zipper 212 257 IPR004827 GO:0003700|GO:0006355
Pste4g02957 506 PANTHER TRANSCRIPTION FACTOR TGA9 125 505 - -
Pste4g02957 506 MobiDBLite consensus disorder prediction 114 134 - -
Pste4g02957 506 Gene3D - 214 264 - -
Pste4g02957 506 CDD bZIP_HBP1b-like 215 267 - -
Pste4g02957 506 MobiDBLite consensus disorder prediction 143 169 - -
Pste4g02957 506 ProSiteProfiles DOG1 domain profile. 288 502 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02957 Pste-Chr4 21056041 21064137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02957 86 506 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 63.883 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste4g02957 DOG1 7.7e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00455 5 2967463 2974521 Pste4g02957 4 21056041 21064137 PCT