Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02950 CGAAAACGTTATTGGGCTTCAACGGGCCCACAACAGGTCAGATTGGTGAACAGAGCGCGTCTCTAAAGCCCATTGTGGATTATGCAGTCGGCGATGGCAGAATCTCCGGCGAACAGAGAGAGCAAAAGCGAAGAGCAAGAAGATGACGATTACATGGGTGACATTTCTCGCTTTCTTCCTTCCAATAATGCTTTCCACTCTCCCAACACTTCTTCATCTATTAAGATTTCCAGCAAGAAAAATCCTTTGGTCAACTCTTCAAAGAACAAGTTGAAAAATCTTAGTTGGCAAGAGCGGCGAAAACTTGAAAGAGAAAGGAAGCAACAAGAAGAGGATGAGAAAACATTAGCAAAAGTGGAAGCCCCGATACCACAGTCCAACATTGGGTTTAAACTTCTTAAACAGATGGGTTACACCCCAGGTTCTTCCCTTGGCAAGCAGGGTTCGGGCAGGGCCGAACCAGTGGGAATTGAAATTCGACGATCACGAGCTGGTGTAGGCTTAGAAGATCCCCACAAGGAGAAAAGGAAAAGGGAGGAGATCATGATGGACAAGAAAAGGAGAAAAGAGGAGGACCTAATGAAAGAATTTGGGTCTAGGCAGAAGTCACAGTGGCAGAGTAGGAGAGTTATAATTAATTATAATAAGGCAAAGGCTGCCCTTGACCAATTGGAAAATAGAGAAATTGTGGAGCCACAAAAGAATGAGGATGATGCAGAGGGTGAAGAAGAAGAAGAGGAAGAAATAACAGAAGAGGAATTGAATGATGTTTTGATGAAACTGAGGGATGAATTTCGTTATTGCCTCTTTTGTGGATGCCAATACGAATCAAGTGATGCTCTTTTGGCCAACTGCCCTGGAACCAATGAAGATGACCACTAAACTGAAGATTTCTGGAAGTGGACATTATCAGATTTGTTGTGTTTGTCAAGCAAGTGCTGTAAGCTTTTAATGCTTATTCCAATGAAGCTGAATATGGTTACATTTGGTGGATGATTGGATTTATGACACTTCTTGTGCCAATTTACAAATGAATTGTGTTCTATGCTCATTGCAATCCAGGTAGCAGGTTGCCTCATTTTCATCCATGCCAAGGGACGATGCGGCCTCTATTTTAGGAAATAGATTAGCTGATACACAGTTTGTGAAACTTTTCAGTTCATGTTGGAAAATTTCACGGTAGTTTACTCGTATAAATGTATGAGCCAAGATATGGGATCAATTATCCTTATTGGAGCTGCTTCTATGAATAATTTGTGACTATTAAATGCTGTTCTCAGAAATTTTGAGCTTGTATCAATATGAAGGTAAATTTTGAGTATGTTATTGGTATTATTACAAATGATTAG 1349 0.407 MQSAMAESPANRESKSEEQEDDDYMGDISRFLPSNNAFHSPNTSSSIKISSKKNPLVNSSKNKLKNLSWQERRKLERERKQQEEDEKTLAKVEAPIPQSNIGFKLLKQMGYTPGSSLGKQGSGRAEPVGIEIRRSRAGVGLEDPHKEKRKREEIMMDKKRRKEEDLMKEFGSRQKSQWQSRRVIINYNKAKAALDQLENREIVEPQKNEDDAEGEEEEEEEITEEELNDVLMKLRDEFRYCLFCGCQYESSDALLANCPGTNEDDH 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02950 266 MobiDBLite consensus disorder prediction 136 171 - -
Pste4g02950 266 Coils Coil 149 169 - -
Pste4g02950 266 PANTHER UNCHARACTERIZED 18 266 IPR039249 -
Pste4g02950 266 SMART DUF4187_2 212 266 IPR025239 -
Pste4g02950 266 Pfam Domain of unknown function (DUF4187) 215 266 IPR025239 -
Pste4g02950 266 Pfam G-patch domain 98 141 IPR000467 GO:0003676
Pste4g02950 266 Coils Coil 72 92 - -
Pste4g02950 266 MobiDBLite consensus disorder prediction 1 93 - -
Pste4g02950 266 MobiDBLite consensus disorder prediction 208 226 - -
Pste4g02950 266 ProSiteProfiles G-patch domain profile. 98 144 IPR000467 GO:0003676
Pste4g02950 266 SMART G-patch_5 96 142 IPR000467 GO:0003676
Pste4g02950 266 MobiDBLite consensus disorder prediction 132 178 - -
Pste4g02950 266 MobiDBLite consensus disorder prediction 33 65 - -
Pste4g02950 266 Coils Coil 180 200 - -
Pste4g02950 266 MobiDBLite consensus disorder prediction 198 226 - -
Pste4g02950 266 Coils Coil 217 237 - -
Pste4g02950 266 MobiDBLite consensus disorder prediction 66 91 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02950 90 140 C2H2 Transcription Factor Family AT5G26610 45.098 6.70e-07 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02950 4 20949599 20952663 Pste4g02950 4 20949599 20952663 ECH