Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02939 GGGACCTATTTTCACAACTATATTAAAAAGAGAAAACAGTGACAAATGTCCAAGTATATAAATTTCATTCACTAACTGGAACTATGCTTGTGCTAATTAGACAAAAGATGTATTATTCTTCACAGGTGTCGAATGGAGCCAACTTTGGGGGCTCAGAAAAAAACATCATCAGCTTCCAACAGCATGTGTTTGATGATCCAGTTTCGTGTTTGAGGGTGGATTTTTCACAAAATTTGTTGTGTCAATCTTCAGGGAACAACTCAACTCCTCTATTTGGAAGTGTGGTGGATTCTATCTTGTCCAGTGATGAAGACACGTTTTGTGAAACGTATAGTGAACTTGCTTGCCATGATGTGTCACTTTATCAGCATTTTAGACACGAAATTGATGACTTGGAGGGTGATGATTCTGCCCCAGTTAAAAGGATCCAGGTTGAGGTTGAGTGTGCCAATTCTACAAACTTTGCTTCTAGCATAGTTCCAAAGAAAGCAAGGCCAAAGGCTGTGTTAGAGATGATGAATTCAAAGTCGCTGACAATTTTTCAAGTTAAAAGCCACTTGCAGAAATATCGAACCACAATGTACGTGCAGAACACTTGCAAAAAGGGATATGAAGAAAGGCAGGGTAGAGACATGGTCACTGAACTTCAACAGCAAATGTAA 662 0.3912 MLVLIRQKMYYSSQVSNGANFGGSEKNIISFQQHVFDDPVSCLRVDFSQNLLCQSSGNNSTPLFGSVVDSILSSDEDTFCETYSELACHDVSLYQHFRHEIDDLEGDDSAPVKRIQVEVECANSTNFASSIVPKKARPKAVLEMMNSKSLTIFQVKSHLQKYRTTMYVQNTCKKGYEERQGRDMVTELQQQM 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02939 192 Gene3D - 88 168 - -
Pste4g02939 192 SUPERFAMILY Homeodomain-like 134 164 IPR009057 -
Pste4g02939 192 NCBIfam myb-like DNA-binding domain, SHAQKYF class 134 164 IPR006447 GO:0003677
Pste4g02939 192 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 93 180 IPR046955 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02939 Pste-Chr4 20803015 20804408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02939 134 173 G2-like Transcription Factor Family AT5G29000 55.000 8.37e-09 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste4g02939 None None None