Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02938 GTTGATTTCTGGTTCTTGTTTTCTTCTTCCTTCCACCCTTCCATGGAGTGCCCCTTAATAAGGATGAACCTCTCATAGATTCATGCATGCTATCCCAGAAATTTGAACTGTTATTTTGCAACTCTTCCTACCATAGTTGTTCAAATCTTGAGGGAACATTTGGGTTGTCTATAAATGAATCAAAATAAGATTGATTGTGTAGAAAGGATTCAACAAAGCTATGGTCTAAATGGTGATTGGAATTCTGAATTTGGAAATTGTTCTACTCAATATTTTGACATCAGGCAGGCTTCAAATATAGGAACTTGCAATCAACCACTTGCCATGGCCAGTGGAGGGATGGAACAAGAACCACACATAGACCAAAATAAATCATCTAGCAGCATTATAAGCCGTTTTGAGACACCAGCTTCAGCCTTTTATGCAACAGAAATTTGCATGGGTTTCCCACAATATGATAACCAAGTTGGTAATCCCTCTTTGATATCTCAGTTCTCTAAGTTTAATGATAAGGAATTCCCTTTGTATCAATCTCCCAGGCAAAGCCTTTTCATGGCTTCATTAGCAAACCAATCTGCCCCTAGCTTTGAGTTGCCAAATCCCTTGCAAGCAATGCTCAAATCTCAGTTGTATAGCGACCAATGTTGTAGATCTCCTGAAAATTCTAATAAAATCCCATTTGGGAATTTCCGTGGCAGCAATTTTCTTCCAATTGATCAACCTAAGTTGTTCATTGATGAAGCTGCCTCAATTAGTAGAAGCCCTTCAATTCCTTCTATAGGAAGTCAGGATCAAACAATTTCTTGTGGCTCATACAATTTACCTGCGGCACAGTTTAGCTTCTCTTCTCAGCAAGAGATGCTCTCTCCAACAGGTAGCATGTCAACTACTTCTGGAAACTCTATTTCAAATGGACCAGTAGTTTCAAATAAAACAAGAATAAGATGGACTCAGGAACTTCATGAGAAGTTTGTTGAGTGTGTGAATCGCCTTGGAGAAGCAACACCAAAAGCAATACTAAGGCTGATGGAATCAGATGGATTGACCATCTTCCATATTAAAAGTCATTTGCAGAAATATAGAATTGCCAAATACATGCCACAGCCAACTCAAGGGAAATCTGAAAAAAGAACCAATGCAGAGAATGTGCATCTTGATGCCAAAACTGGCTTGCAAATCAAAGAGGCACTTCAGTTGCAGCTAGATGTTCAGAGGCGTCTCCATGAACAACTAGAGATTCAGAGAAAATTACAATTGAGGATTGAGGAACAAGGAAAGCAACTTAAAATGATGTTTGACCAACAGCAGAAGACAGGTGATAGCCACTTGAATACTCAGAATTTGAGCAATACAACCAATAATGATAGACCAAATAGTTCCAAAGATGTTCAGGTTTCAATTTCTGAAGGGTCAGAAAATTCCTTGCTCCTTCCAACATAAGTTAGATCTCCAATCTCATAATTTCACAGCTATATACATAAGCAATTAATTTCAGTAACAGTGTGCCAACAAATCATACTCCTTGTAAAAGAGTCAAACCACACCATACAATTTCGTTTTGTAAGTAAAGCAGCACTTTTGTTCTGTAAGTGCAAACTCAATAAATTTGTCCATAAAAGATGAGTGTGCTACTTTTGCTCTTGAAAAAC 1649 0.3808 MNQNKIDCVERIQQSYGLNGDWNSEFGNCSTQYFDIRQASNIGTCNQPLAMASGGMEQEPHIDQNKSSSSIISRFETPASAFYATEICMGFPQYDNQVGNPSLISQFSKFNDKEFPLYQSPRQSLFMASLANQSAPSFELPNPLQAMLKSQLYSDQCCRSPENSNKIPFGNFRGSNFLPIDQPKLFIDEAASISRSPSIPSIGSQDQTISCGSYNLPAAQFSFSSQQEMLSPTGSMSTTSGNSISNGPVVSNKTRIRWTQELHEKFVECVNRLGEATPKAILRLMESDGLTIFHIKSHLQKYRIAKYMPQPTQGKSEKRTNAENVHLDAKTGLQIKEALQLQLDVQRRLHEQLEIQRKLQLRIEEQGKQLKMMFDQQQKTGDSHLNTQNLSNTTNNDRPNSSKDVQVSISEGSENSLLLPT 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02938 421 Gene3D - 252 308 - -
Pste4g02938 421 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 242 395 IPR044848 GO:0003700
Pste4g02938 421 Pfam Myb-like DNA-binding domain 257 303 IPR001005 -
Pste4g02938 421 MobiDBLite consensus disorder prediction 375 421 - -
Pste4g02938 421 Coils Coil 336 356 - -
Pste4g02938 421 FunFam Two-component response regulator 250 308 - -
Pste4g02938 421 SUPERFAMILY Homeodomain-like 251 304 IPR009057 -
Pste4g02938 421 Pfam MYB-CC type transfactor, LHEQLE motif 333 380 IPR025756 -
Pste4g02938 421 NCBIfam myb-like DNA-binding domain, SHAQKYF class 253 305 IPR006447 GO:0003677
Pste4g02938 421 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 252 307 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02938 Pste-Chr4 20793876 20796553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02938 236 377 G2-like Transcription Factor Family AT4G28610 58.784 8.27e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste4g02938 Myb_CC_LHEQLE 5.7e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02938 4 20793876 20796553 Pste4g02938 4 20793876 20796553 ECH