Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02929 GATGAGAAAAAAACAACTTATTCAAGCCCGATTCCATAAAAATCAATTGCTTCTCCTTCACTTCAACCTCCACATACTCTCTTCACTCCTCTCTGTCTTCTTCTTATGACTCGCTGAGTCTCCCAACTCGGAACGATTCAACCGAACGCCGATTCGCCGCAATTCGGTTGCTTCGGATCCAATGGGTAGCATCGTGGAAGACGCCGACACAGTGTATGTGGCGGTCGGAAAGAACTCCGAGAAGACGCAACAACTGTTGCATTGGGCGCTTAAGAATTTCTCCGCCAAAAATATTTGCCTGCTTCATATTCACCGACCTAATTCTATCAATTCGTTCAACAGAAATCTCTCTGAGAATGAACCAAAGGACTGTTCAATTGAGGCATTCCAGGAGCATGGAGATCAAACAGTGAACAAACTTCTAGACCAATACATTCTCACTCTGGTCCCGACAGGGGTACAGGCCTATAAATTGTTGATTGAGATGGATGATATTGAGAAAGGGATCTCAAAAGCTATTGCTCAACACAATATTAGATGGCTTCAAGAGTCAGAGAAAGCTGTTTTTGTACGAGAACAAGCATTTCTATCCTGCAATATTTGGTTCATTTGCAAGGGCAACCTCATATGTACTAGGGTTTATAGTAAGCATACTTCTGATATTGAGACCAGTCATGCATTGTTGGTGCTCAATCCAAACACAGAAGCCAAGCAATCAGAAAAGATTAGATCAGAATCGATTCCTGATGATGCATTGAAATATTTAGATTCTGATGATATGAAAGAGATCAAAAGTGTCAGTTCTCACCGTTCTTTAAAATCAAAATGGTCATTTAACAATGTGACGAACAGGTCAAAGTTGGCAGATTTGATGTTTCATGAGGATGAAGCATTTGAAAGCTGGTGTTCTAAGGAGATAAGAAGAAGAAAAGAAATTGAAGAACAATTGGCAAGGGAAAAGCTAGAAGTACAGAAAATGAAGAATCAGCGAGATGAAATACTTGAAGAATTGCAAATGGTTCAAGGCCAAAATTCAGAACTTAAAAAACAAATATCTGAGTCCCATTGTACGATAACGGAGTTGGAGGAGAAGATCATATCAGCTGTGGACCTCTTGATAAGTTTCAGGGAAAAGAGAGATAGGCTTAGGATAGAGCATGCAAATGCAGTAAGGAAAGTCCAAGTGCTGAGAAAATTTGAGGAAGCAGATACTTCCTTCTCTTATCGGGTAGAATTTCCTGCATTTTCTTTTGTGGAGATCAATGAGGCAACTCATGATTTTGATCCATCTTGGAAGATTGGAGAGGGAAGGTATGGAAGTGTTTACAAGGGAATGCTTCGCAACATGCATGTTGCTATAAAAATGTTACCCTCATATGGTTGTCAGAGCCTATCAGAGTTCCAACATCAGGTTGAAGTCTTGAGTAGGGTAAGGCATCCAAACCTGTCGACACTAATTGGTAGCTGTGCTGAGTCTCGGTCACTTGTGTATGAGTATGTAAACAATGGTAGCCTTGAAAGCCATCTCGCCTGCAAAGATAAGAATCCACTTCCATGGCAAATTCGGATATCTATTGCTACTGACATATGCTCTGCTCTAATCTTCCTTCACTCGAGTGAACCTTGTATTATCCATGAAAATTTGAAACCTAGTAAGGTTCTCCTTGATGCTAACTTTGTAGCCAAACTCAGCGACTTGGGCATTCCGTTTTTAGTCCAGCAAAGTTTGGATTCAGCTGACACAAGCACAATATGTAACCCGAATGAACGTTTGGCATATGTGGATCCAGAGTATTTTGTCAATGGAAAGTTTACACCAGAATCAGATGTATATTCATACGGAGTCATATTGTTACAACTTCTAACTGGAAGACCACTTTTTGGGTTAGTTAGAGATATGAAATGTGCATTGGAAAAGGAAAACCTTAAAGCAGTCTTGGACTTTTCAGCTGGTGAATGGCCACCTTTTCAAACTGAACAGCTGGCATATTTAGCATTGAGATGTTGTGAAAAGTCTTGGTTGAACCGACCAGACCTTGTGTCAGAAATCTGGAGTGTTCTTGAACCATTCAAAGCTACTTGCATTCACACGCCACCACATTTGATTTCTAAGAAGCTTCATCGTGTTCCTTCCCATTTTGTCTGCCCCATTGTCCAGGAAGTAATGGAAGATCCATACATAGCTGCAGATGGCTTTACGTATGAAGCAGAGGCAATAAGAGGATGGTTGCATAGTGGCCACGACACTTCCCCCATGACAAACCTCAAGCTTGATCACACAGATTTGGTACCTAACTATGCTCTACATAATGCAATTCTGGAGTGGCAGCAACAGTGAACCTTCATTGTTCATTATACTTGCACATAGCTCATTGGTGTATATCACACTTATCCTGTAAAGGAAAAAAATCTAAAATGAGCAAGTAAGGGTGTATTTACACTTGAACTTTAGCGGGTTATAATCATAATTCATTTTAAGATCACAAGTTACCCTTACAACACTCATTTTAGAAACTTCACTTTAGAAGAGTCATGTCCTAATATCTCGATTGCAAGTTGGGATTGAAAAAATAGGAAAATAGAGGGCAAGGGAAATTTTTAGTTAAACCTTTCCCCTGATTCAGAGATTTCTAAAGAGGGATGATCTTGTAATGTAAATAAGGACACCTTTTTTTTTATGAACATTTAGCTGAAACATATTTGATTTGACCACCCTCTCCAATCATTTTTATTGATTTATTTATAATCTTTTTAACTTTTCATCTTATATTTGGATATGACTCTTCTAGAGTAAAAGGAATGCACATTAGAGGATAAAGTTAATCATTAATTAGAGATTAACTATTGAGATTATAGTTAACTTTAGATTATGTTATATATGTATTTAATTTTATTATGATTCTTAGCAATTGAATTTTAAGTTCATT 2927 0.3847 MGSIVEDADTVYVAVGKNSEKTQQLLHWALKNFSAKNICLLHIHRPNSINSFNRNLSENEPKDCSIEAFQEHGDQTVNKLLDQYILTLVPTGVQAYKLLIEMDDIEKGISKAIAQHNIRWLQESEKAVFVREQAFLSCNIWFICKGNLICTRVYSKHTSDIETSHALLVLNPNTEAKQSEKIRSESIPDDALKYLDSDDMKEIKSVSSHRSLKSKWSFNNVTNRSKLADLMFHEDEAFESWCSKEIRRRKEIEEQLAREKLEVQKMKNQRDEILEELQMVQGQNSELKKQISESHCTITELEEKIISAVDLLISFREKRDRLRIEHANAVRKVQVLRKFEEADTSFSYRVEFPAFSFVEINEATHDFDPSWKIGEGRYGSVYKGMLRNMHVAIKMLPSYGCQSLSEFQHQVEVLSRVRHPNLSTLIGSCAESRSLVYEYVNNGSLESHLACKDKNPLPWQIRISIATDICSALIFLHSSEPCIIHENLKPSKVLLDANFVAKLSDLGIPFLVQQSLDSADTSTICNPNERLAYVDPEYFVNGKFTPESDVYSYGVILLQLLTGRPLFGLVRDMKCALEKENLKAVLDFSAGEWPPFQTEQLAYLALRCCEKSWLNRPDLVSEIWSVLEPFKATCIHTPPHLISKKLHRVPSHFVCPIVQEVMEDPYIAADGFTYEAEAIRGWLHSGHDTSPMTNLKLDHTDLVPNYALHNAILEWQQQ 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02929 718 PANTHER OS02G0152300 PROTEIN 11 714 - -
Pste4g02929 718 ProSitePatterns Protein kinases ATP-binding region signature. 373 394 IPR017441 GO:0005524
Pste4g02929 718 SUPERFAMILY Protein kinase-like (PK-like) 343 628 IPR011009 -
Pste4g02929 718 CDD RING-Ubox_WDSUB1-like 650 705 - -
Pste4g02929 718 Gene3D Transferase(Phosphotransferase) domain 1 440 634 - -
Pste4g02929 718 ProSiteProfiles Protein kinase domain profile. 367 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02929 718 Gene3D Phosphorylase Kinase; domain 1 338 439 - -
Pste4g02929 718 SMART Ubox_2 652 715 IPR003613 GO:0004842|GO:0016567
Pste4g02929 718 Coils Coil 242 304 - -
Pste4g02929 718 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 648 718 IPR013083 -
Pste4g02929 718 Pfam U-box domain 649 717 IPR003613 GO:0004842|GO:0016567
Pste4g02929 718 ProSiteProfiles U-box domain profile. 648 718 IPR003613 GO:0004842|GO:0016567
Pste4g02929 718 SUPERFAMILY RING/U-box 646 718 - -
Pste4g02929 718 Pfam Protein tyrosine and serine/threonine kinase 372 619 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02929 Pste-Chr4 20676617 20689742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02929 9 717 U-box Gene Family AT2G45910 39.649 4.33e-177 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pste4g02929 PK_Tyr_Ser-Thr 3.2e-36 CL0016