Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02928 ATGCTCAAATTGAAATTACCTTTGGCTGGAAAAGGTCAAGGCTTGTCTACGTTGTTGCCGTTTAATTCCATCCTGAAATCGACTGAAACGACGCTGACGTTTACCTGTAAACCACGTGCAGTTCCGCAAAAGGCACGTGCGATCTCTCACTCCTTCCTCAGAGACCCAACCACAATTCATTGCCATATGCCAGTTGCAAAACTCCCGGCCTCAGGCACGAAAACAGAAGAAGATGGAAATGATTCTTTAGATACAATAATCAGACAAGCAATTGGAAAAGAGCCTCTGCTTTCCTTTCCTAGGGCCGGTGACAGCCCAGTACAGTGGATTCAATTACTTCATGCGTTAGATCAGCAAGAACTTCCAGGGTGGCCTTTGCTCTCTCCTGTGAAGGTTCAGTTACAAAAGTGCAACAAGTGTTCTCGAGAATTTTGCTCTCCCATTAACTATAGAAGGCATATACGCATACAGCATCGGTTGAAAAAGTTTGATAAGGATTCGAAAAAAAATAGGGATCTTTTAGGGGCATTTTGGGATAAGCTCTCCATAGAAGAGGCAAAAGAAGTTGTGTCATTCAAGAATGTGATGCTGGAGGATGTTCCAGGCTCTTCAATTTTAGAAGCTTTGACAAACCTTAAAAAACAAGGATTTTCTTCTCTTCCACAGTACTATCTGAGGGCTGGTTCTGCCCTTTTGAATATTGTTCAATCCAGGCCTTCTAATTTTCCTATTTCTTCCCAAGAGTTGTTCAGTATCCTAGATGATTCTAGTGAAAAAACATTTTTGGGTGGATCAGCAGTGTCAATGCAAAGATATGTTTTTGATGGAGAGGCTGGAAAGATTGGTCTTGAACCAAAAAACCTAGTTGCTTGCACAAGTTTTTTGCTAGAGCAAAAACTGGTGAAGGCCTGGCTTGCTGACAAGGATGCTGAAGCATTGAGATGCCAGAAGCTGCTGGTGGAGGAGGAGGAAGCTGCTCAAAAAAGAAAAGCTGAAATTTTAGAGAGGAAACGGCAGAAGAAGCTTAGACAGAAAGAACATAAGGCAAGAGAACGACTCGAAGATGACTCAGAAATTAAAGGGAACATAAGCAGCACAGGAGAGGATTTATCGCCTGCAGAAGCATCTTTGAGTACATGTGACTTTGAACCACATAATCCAGATATTTTTGCAGATCATTCTCCTCCAGCTGATGTAACTTCGTATTGCCTAGACACTAATGAAGTTATAGAAGGGGGTTCACTGTCAGGGTATGATTGTGACACTGATCAGTATATAGAGCGACGAACATCACAAGGACATCATTGCCGGCACACAATGGCTGCCAGATGGCAAGGGGTGCCTAAATCACAGTGGACCAAAGCCAATAGTTTGCATGCTGGCCAGAATTCTCATATGTTAAAGATTGGAGTCATTCAAAAACATGGAACCAGCCGTGATCAAAGGGCAGCTCCTCTAGTTAATGGTAATAAGGTTTGGAGCCGAAAACCTAAATCAGAAACTAATGGGGTGGTTTTAAAAGCCAAACTGCTGAAAGAACAAACCAAAGGTAAGAATCATGAAGTTTTGATAGGATCTGTATCAGTTAGTCTGGGTAATTGCAGCCATTCAGAAGGGAATTTGATGGCACCCCAGCGGGACTGCTTGGTAGAGAATCCAGGCAAGCTGAATACTGCTCCAGTGAAACATGATTCTTCTCAAGGAAGCAACGGTAGATTAATGGTTAAGCTTTGGAGGCCGGTTAGCCAGCATGGAACTAAAGATACAATGCCACTTCAAAATGGTGGGGCAGAAGCTAATGTAATTAACGGAAAATATGACCAAAATTTGCCGGGTCAAAGTAGCTTAAGGTTGCATAGTATAGATGTTAGCGTTGGGAACAATTTTTCCCACACTGAGGCTAAAGTAGAATCACAAAACTTGCGGCTATCCAGCCATGCTGCAAAAGCCTTTCTTGCTCAAAGATGGAAAGAAGCTATCTCATCAAACCATGTGAAATTGGTTGTTACAGCTGATCGTGAACTAGCCGCACGCCAACCTTCTAATGCAGACATATGTGTTCTTGCAAATAGAGAGAATAGATTGTCTGCAACCTTGGGAATTGCTAAATCCAAACCCAAAACGAAGGCTGAGAAGGGAATGAAGATAAAGTACATTCCCAAACAAAATGCACCAACCTAGCGAGGGAAGAAACCTGAAGAGGAAATTGGGTTATTTAACTATGACAGATTATAGATTGGCTTCTCGCCGATTAATTTATTAGCAGAGGTTCCAATTTTATCAATGGTCTTCTGTCAAAAAAGTTGGAGGTAGGTTTATTTTTTATATTCCGTCCTTTTCCTTCAAATGATGGCATAGGGGATTGTGCATTAAGTTTATTTTTTTCTTGGTGGCATTTTTACCAAAAGTTGTGTAATAAATGTCTAGTTATTATAAAAGGGCATCCTCTTGT 2452 0.4156 MLKLKLPLAGKGQGLSTLLPFNSILKSTETTLTFTCKPRAVPQKARAISHSFLRDPTTIHCHMPVAKLPASGTKTEEDGNDSLDTIIRQAIGKEPLLSFPRAGDSPVQWIQLLHALDQQELPGWPLLSPVKVQLQKCNKCSREFCSPINYRRHIRIQHRLKKFDKDSKKNRDLLGAFWDKLSIEEAKEVVSFKNVMLEDVPGSSILEALTNLKKQGFSSLPQYYLRAGSALLNIVQSRPSNFPISSQELFSILDDSSEKTFLGGSAVSMQRYVFDGEAGKIGLEPKNLVACTSFLLEQKLVKAWLADKDAEALRCQKLLVEEEEAAQKRKAEILERKRQKKLRQKEHKARERLEDDSEIKGNISSTGEDLSPAEASLSTCDFEPHNPDIFADHSPPADVTSYCLDTNEVIEGGSLSGYDCDTDQYIERRTSQGHHCRHTMAARWQGVPKSQWTKANSLHAGQNSHMLKIGVIQKHGTSRDQRAAPLVNGNKVWSRKPKSETNGVVLKAKLLKEQTKGKNHEVLIGSVSVSLGNCSHSEGNLMAPQRDCLVENPGKLNTAPVKHDSSQGSNGRLMVKLWRPVSQHGTKDTMPLQNGGAEANVINGKYDQNLPGQSSLRLHSIDVSVGNNFSHTEAKVESQNLRLSSHAAKAFLAQRWKEAISSNHVKLVVTADRELAARQPSNADICVLANRENRLSATLGIAKSKPKTKAEKGMKIKYIPKQNAPT 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02928 726 ProSitePatterns Zinc finger C2H2 type domain signature. 137 158 IPR013087 -
Pste4g02928 726 MobiDBLite consensus disorder prediction 337 372 - -
Pste4g02928 726 Coils Coil 331 351 - -
Pste4g02928 726 ProSiteProfiles Zinc finger C2H2 type domain profile. 135 163 IPR013087 -
Pste4g02928 726 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 63 725 - -
Pste4g02928 726 MobiDBLite consensus disorder prediction 347 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02928 Pste-Chr4 20660541 20673046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02928 77 725 C2H2 Transcription Factor Family AT4G25610 45.386 1.22e-159 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste4g02928 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02928 4 20660541 20673046 Pste4g02928 4 20660541 20673046 ECH
Pste9g01160 9 9155001 9164270 Pste4g02928 4 20660541 20673046 PCT