Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02880 TCATAATTCAGGATAAAATTTAACAAACAGTGAAGAGTGTGTTTAAAGAGGATATTGATACAACTAACAACAAAGGGAGGGACAAAGGTAAATTCCAAAAGTAGGAGGTTTTGTGTTTACCCCTAGAAAGCAAAGCAGAGCAAAGCTGAGTTGCTGAGAGAGTGGTGGCGGAAGATGACGGAAGTGGCGAGATCAGTGGTGCACGACGTTTTGGGACAAAGAGTGGTTGACGTGGACGAGCCAATTGTTGATTACATAGTCAATGTCCTCGCCGACGATGACTTCGATTTCGGCCTCGACGGCGAAGGCGCCTTCGAAGCACTCGGCGAGCTGCTCGTGGCCGCCGGCTGCGTCGACGATTTCTCCGAGTGCCGCTCCGTGTGCAGCACGCTGTGCGACAAGTTCGGTAAGCACGGTTTGGTGAAGGAGAAGCCCACTGTGCGAAGCCTGGCGGCGCCGTTTCGAATGAACGAAGGATTGGACGACGTCCAAGCTCCCAAGAAGAAGCCCGAGCCCGTCGACGGCCCTCTCCTATCTGAACGCGATCGTATGAAGCTCGAGAGGCGAAAGCGCAAGGAGGAACGCCAGCGTGAGGCACAATATCAGATGCACTTGGCTGAGATGGAGGCCGTACGAGCAGGCATGCCTGTCGCTTGTGTGAGGCATGAAAGCAGTGGTGGACCAAATGTGAAGGACATTCACCTGGACAATTTCAACATCTCTGTTGGTGGTCGTGATCTCATTGTGGATGGTTGTGTCACCCTTTCGTTTGGAAGGCATTATGGTTTGGTAGGAAGAAACGGGACAGGGAAAACCACCTTCCTTAGGCACATGGCTATGCATGCCATTGATGGTGTTCCCAGGAATTGTCAGATACTGCACGTGGAGCAAGAGGTGACTGGTGATGATACCACGGCTTTGCAGTGTGTCCTCAACTCTGACATTGAGAGAACTCAGCTTCTTCACGAAGAAGCTCAGTTAATTGCCAAACAGAAAGAATTTGAGGACAAAATCGAAAAGGGTGATTCAAATGGAGTGGTCAGTAGGGATGGCATTTCACAAAGGCTTGAGCAAATATACAAGAGGCTTGAACTAATTGACGCTGATTCTTCTGAGGCTCGAGCAGCATCCATACTAGCAGGTTTGAGTTTCTCTCCTGAGATGCAGAAGAAAGCTACAAAAACATTTTCTGGAGGATGGCGGATGCGAATAGCTCTTGCTCGTGCACTGTTTATAGAGCCTGATATATTGCTTCTTGATGAGCCTACGAATCATCTTGATCTTCATGCTGTCTTATGGCTTGAATCATACTTGGTTAAATGGCCAAAAACATTTATTGTTGTTTCTCATGCTAGAGAGTTTTTAAACACGGTGGTTACCGATATAATTCACTTACAAAACCAAAAACTGACTACGTATAAAGGGAATTATGATACTTTTGAGAAGACTAGAGAAGAACAAATTAAAAACCAGCAAAAGGCAGTAGAGGCAAACGAACGAGCAAGATCTCATATGCAGGCTTTGGAGCGAATGGGCCATGTGGATGAAATTGTTAATGATCCTGACTACAAATTTGAGTTCCCCACTCCAGATGATAGACCTGGCCCACCGATAATAAGTTTCAGTGATGCATCATTTGGTTATCCTGGGGGCCCCATTCTGTTTAAGAATTTGAACTTTGGGATTGATCTCGACAGCCGTATTGCTATGGTTGGACCTAATGGCATTGGCAAATCAACTATACTAAAGTTAATTGCTGGGGAACTACAGCCCAGTTCTGGTACTGTCTTCCGTTCTGCCAAGGTTCGTATAGCAGTGTTCAGTCAGCACCATGTTGATGGTCTGGACTTGTCCTCAAATCCTCTTCTGTATATGATGCGCTGCTATCCTGGAGTTCCAGAACAGAAGCTTCGAGCTCACTTAGGTTCTTTTGGTGTAACTGGAAATCTTGCACTGCAGCCCATGTATACTTTGTCAGGTGGTCAGAAAAGCAGGGTTGCCTTTGCAAAGATAACTTTTAAGAAGCCACACATAATATTACTTGATGAGCCATCTAATCATCTGGATTTGGATGCTGTTGAGGCGCTCATTCAAGGTCTAGTGCTGTTCCAAGGAGGCATTCTCATGGTGAGTCACGATGAGCACCTGATCTCTGGAAGTGTGGAGGAGCTATGGGTTGTATCGCAAGGAAGAGTGACACCATTCCATGGCTCATTCCATGATTATAAGAAGATACTCCAATCATCCTAGGAAAGTGAGTTTCAGTTAAACATATTTTGTCCCTGGACCACATTTTTCTGCTGTTCGTCTCAGCCCTCATACATGAGAACATACAATTTTGCAATTTATAATTTCTGTAATGTCTGAACTTTTTGTTTTATATATATTTTTTACAAAAAACATTTACGTGATTCCACCACACAATCACGTTGCAATATCATGTTAAAAATGTTTGGATATTCACTGGAATGAAAAAATATACAAGGTTTAAGCAATCATAAAAAAATTGGAGATGGAGATAAACGTAAAATTTAAT 2536 0.4452 MTEVARSVVHDVLGQRVVDVDEPIVDYIVNVLADDDFDFGLDGEGAFEALGELLVAAGCVDDFSECRSVCSTLCDKFGKHGLVKEKPTVRSLAAPFRMNEGLDDVQAPKKKPEPVDGPLLSERDRMKLERRKRKEERQREAQYQMHLAEMEAVRAGMPVACVRHESSGGPNVKDIHLDNFNISVGGRDLIVDGCVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGVPRNCQILHVEQEVTGDDTTALQCVLNSDIERTQLLHEEAQLIAKQKEFEDKIEKGDSNGVVSRDGISQRLEQIYKRLELIDADSSEARAASILAGLSFSPEMQKKATKTFSGGWRMRIALARALFIEPDILLLDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNTVVTDIIHLQNQKLTTYKGNYDTFEKTREEQIKNQQKAVEANERARSHMQALERMGHVDEIVNDPDYKFEFPTPDDRPGPPIISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCYPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHLDLDAVEALIQGLVLFQGGILMVSHDEHLISGSVEELWVVSQGRVTPFHGSFHDYKKILQSS 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02880 691 Coils Coil 125 145 - -
Pste4g02880 691 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 152 690 - -
Pste4g02880 691 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 481 690 IPR003439 GO:0005524
Pste4g02880 691 CDD ABCF_EF-3 175 411 - -
Pste4g02880 691 MobiDBLite consensus disorder prediction 103 138 - -
Pste4g02880 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 462 679 IPR027417 -
Pste4g02880 691 Pfam ABC transporter 498 628 IPR003439 GO:0005524
Pste4g02880 691 FunFam ABC transporter F family member 3 127 445 - -
Pste4g02880 691 CDD ABCF_EF-3 481 673 - -
Pste4g02880 691 ProSitePatterns ABC transporters family signature. 338 352 IPR017871 GO:0005524|GO:0016887
Pste4g02880 691 Pfam ABC transporter 196 366 IPR003439 GO:0005524
Pste4g02880 691 MobiDBLite consensus disorder prediction 101 138 - -
Pste4g02880 691 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 175 434 IPR003439 GO:0005524
Pste4g02880 691 SMART AAA_5 506 673 IPR003593 GO:0016887
Pste4g02880 691 SMART AAA_5 199 411 IPR003593 GO:0016887
Pste4g02880 691 Pfam ABC transporter 405 449 IPR032781 -
Pste4g02880 691 Gene3D - 446 691 IPR027417 -
Pste4g02880 691 Gene3D - 127 445 IPR027417 -
Pste4g02880 691 ProSitePatterns ABC transporters family signature. 600 614 IPR017871 GO:0005524|GO:0016887
Pste4g02880 691 FunFam ATP-binding cassette sub-family F member 3 446 691 - -
Pste4g02880 691 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 437 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02880 Pste-Chr4 20312900 20329420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02880 437 642 Calmodulin-binding Proteins AT2G36910 26.050 4.45e-11 64.7