Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02875 GTGGAATTTTTTATCTGAGTGTGGTGGTGGGGGAAGGCACGAGAACGGTTGAATATTTAAATAGATTCACGTGCCTTTGTCAACCTGTGTTTGTCGGTCAATCTTTATTCCCACAAAAGCAAGCCAGAGAGCACAAATAAAAAGCCATTGTGTCTTGCCATTGTTGCTGACCCTAACCACAACAACAGAGAAAAAAAGAAAAGAAGAAAGAAAGAGTGTTTCTACAACATCAACAACAACAACAACAAAAACACTTCACTTCTTGTTCTTCATGGAACTGGCTTTGAGTCTTGGAGATGCTTCCAAACCCTTCACTACTTTTCTTGACAAAGCTGCCACTTTTGGTGTGGGGAAAGGGTTGGAGGAGAAGAGAAGTGATGGTTGTGGCAGAAGGGGTTCTTCAGATCCACCGGTTCAGCTTGATCTTCTTCCTTTCACTCCGGTTCTTAGACCCCAACCGGTTTCTCAGATTCGAATCCCTTGGCTCACTGAAACATGCGGGGCGGCGAGGGTGCTGGACGTGAACCTTTTTCCGCCGGCGGCGGAGGACGGCGACGACGGCACGTCGCTGTCGTCGCCGAACAGTGCAGTGTCGCCGTTTCAGATGGATTTCAGAAACGGTAATGCAGAGTTTGGAGGCAGAAACAAGAGAGAGCAAAATGAAGGTGATAGAGCCAGTGATGACGATGAAAATGGCTCCACAAGGAAGAAACTTAGACTCTCTAAGGAACAATCGGCTTTTCTTGAAGAAAGTTTCAAAGAACACACCACACTCAATCCGAAGCAGAAGCTTGCTTTGGCAAAACAGTTGAACCTTCGACCTCGTCAAGTGGAGGTTTGGTTTCAAAACAGAAGGGCTAGGACAAAGTTGAAGCAAACAGAAGTGGATTGTGAGTATTTGAAGAGATGCTGTGAGACCCTAACAGAAGAGAACAGAAGGTTGCAAAAGGAACTTCAAGAGCTTAGAGCATTGAAAACTTCTCAACCATTCTACATGCAACTTCCAGCCACCACTCTCACCATGTGTCCCTCTTGTGAAAGGGTTGCCACAAATTCCACCACAACTAACCAAACCTCCAATGTTAATGGTTCTCAAATCCCAGTGGAGTTGTCTCTCAGCAAGCCCAGATTATTGCCCTTCCCTAATGGCCAGGCCCAAGCTCCCCAGGCCCAAGCCCATCAAATAGCCTCTTCATGATCCCTGATTCGTCAATGCACATTTTTTGGCTGGTTTTTACATATGATCAATATATATAACATGGTATATTATGATAAAGACAAAGTATTCACATCCCCTATTTATCGTTTGTATATATAGTTTTAGTCTTTTTCTTTATCTTCTTTCATTCATCTGTTTTTTCTTTGGGTTGGAAGAATTATGAATGATCCTTTTTGTCGATCGGTTAGAATGCACCATACTTTTTGGTGGTGAAATTGTGAAATGAAAGGCTTTTATTTTTATTTTTTCTA 1470 0.4327 MELALSLGDASKPFTTFLDKAATFGVGKGLEEKRSDGCGRRGSSDPPVQLDLLPFTPVLRPQPVSQIRIPWLTETCGAARVLDVNLFPPAAEDGDDGTSLSSPNSAVSPFQMDFRNGNAEFGGRNKREQNEGDRASDDDENGSTRKKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATNSTTTNQTSNVNGSQIPVELSLSKPRLLPFPNGQAQAPQAQAHQIASS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02875 308 MobiDBLite consensus disorder prediction 120 150 - -
Pste4g02875 308 Pfam Homeobox associated leucine zipper 201 235 IPR003106 GO:0006355|GO:0043565
Pste4g02875 308 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 44 270 - -
Pste4g02875 308 MobiDBLite consensus disorder prediction 288 308 - -
Pste4g02875 308 MobiDBLite consensus disorder prediction 294 308 - -
Pste4g02875 308 Pfam Homeodomain 145 199 IPR001356 GO:0003677
Pste4g02875 308 Coils Coil 207 237 - -
Pste4g02875 308 CDD bZIP 194 233 - -
Pste4g02875 308 SMART halz 201 244 IPR003106 GO:0006355|GO:0043565
Pste4g02875 308 MobiDBLite consensus disorder prediction 30 49 - -
Pste4g02875 308 CDD homeodomain 145 202 IPR001356 GO:0003677
Pste4g02875 308 SUPERFAMILY Homeodomain-like 138 202 IPR009057 -
Pste4g02875 308 MobiDBLite consensus disorder prediction 97 112 - -
Pste4g02875 308 FunFam Homeobox-leucine zipper protein 18 128 206 - -
Pste4g02875 308 ProSitePatterns 'Homeobox' domain signature. 176 199 IPR017970 GO:0000981|GO:0006355
Pste4g02875 308 Gene3D - 149 199 - -
Pste4g02875 308 ProSiteProfiles 'Homeobox' domain profile. 141 201 IPR001356 GO:0003677
Pste4g02875 308 MobiDBLite consensus disorder prediction 92 150 - -
Pste4g02875 308 SMART HOX_1 143 205 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02875 Pste-Chr4 20253972 20256181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02875 137 295 Homeobox Transcription Factor Family AT4G37790 66.875 2.10e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pste4g02875 Homeodomain 2.3e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02875 4 20253972 20256181 Pste4g02875 4 20253972 20256181 ECH