Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02869 ATGTCGTGTTGCGGAGGTGCAGAAGAGGACTTTGGTGTTCCTCCTGCAAATCAATATAGTACATCACCTAAAAGCAATAATGCATATAGTGGTGGAGGAGGTGGTGACAGAGGAGAGCCAAGGGGCAATGTTGTCAAAAGTGGTGCTCCACAACAAGTATTACCAATTGAGACACCTGCCATTTCATTAGACGAGTTAAATCAATTAACAGATAACTTTGGTACAAAGGCTTTGATAGGAGAAGGTTCATATGGTAGGGTTTACTATGCAAAATTGAGCAATGGTATGGATGCTGCAATCAAGAAGCTTGATACTAGTGCTTCCCCAGAACCTGACTCTGATTTTGCAGCACAATTATCAACAGTTTCAAGATTGAAGAATGACCATTTTGTGGAGTTAATGGGATATTGTTTAGAGGAAAATAATAGAATTTTGATTTATCAACATGCAAGTTTGGGTTCTTTACATGACATATTACATGGAAGGAAAGGAGTGCAAGGGGCTGAACCTGGTCCAGTTTTAAATTGGAACCAAAGAGTAAAAATTGCATTTGGTGCAGCAAAAGGACTTGATTTTCTTCATGAAAAATGTCAACCTTCTATAGTTCATCGCGATGTTAGATCTAGCAATGTCTTACTCTTTAATGACTATGAGGCAAAGATTGCAGATTTCAACTTAACAAATCAATCTTCTGACACAGCAGCTCGATTACATTCAACAAGAGTCTTAGGAACATTTGGCTATCATGCTCCAGAGTATGCCATGACCGGGCAAATAACCCAAAAAAGTGATGTTTATAGTTTTGGGGTTGTGCTTTTGGAACTTTTAACAGGAAGAAAGCCAGTGGATCATACAATGCCTAAAGGACAACAAAGTCTTGTAACTTGGGCAACTCCAAGATTGAGCGAAGACAAAGTGAAACAATGTGTAGATCCTAAATTAAACAATGAATACCCACCTAAGGCAATTGCTAAGTTGGCAGCAGTTGCAGCACTTTGTGTACAATATGAAGCTGATTTTAGGCCAAATATGACTATTGTCGTCAAAGCTCTCCAGCCACTTCTCAATTCAAAACCGGTTGGCCCTGACACTAGTGCTTAA 1101 0.3933 MSCCGGAEEDFGVPPANQYSTSPKSNNAYSGGGGGDRGEPRGNVVKSGAPQQVLPIETPAISLDELNQLTDNFGTKALIGEGSYGRVYYAKLSNGMDAAIKKLDTSASPEPDSDFAAQLSTVSRLKNDHFVELMGYCLEENNRILIYQHASLGSLHDILHGRKGVQGAEPGPVLNWNQRVKIAFGAAKGLDFLHEKCQPSIVHRDVRSSNVLLFNDYEAKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPVGPDTSA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02869 366 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Pste4g02869 366 ProSitePatterns Tyrosine protein kinases specific active-site signature. 201 213 IPR008266 GO:0004672|GO:0006468
Pste4g02869 366 SMART tyrkin_6 73 351 IPR020635 GO:0004713|GO:0006468
Pste4g02869 366 FunFam probable protein kinase At2g41970 46 149 - -
Pste4g02869 366 Gene3D Phosphorylase Kinase; domain 1 46 149 - -
Pste4g02869 366 MobiDBLite consensus disorder prediction 1 46 - -
Pste4g02869 366 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 357 - -
Pste4g02869 366 MobiDBLite consensus disorder prediction 15 29 - -
Pste4g02869 366 SUPERFAMILY Protein kinase-like (PK-like) 52 351 IPR011009 -
Pste4g02869 366 ProSiteProfiles Protein kinase domain profile. 73 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02869 366 Gene3D Transferase(Phosphotransferase) domain 1 151 360 - -
Pste4g02869 366 Pfam Protein tyrosine and serine/threonine kinase 77 351 IPR001245 GO:0004672|GO:0006468
Pste4g02869 366 FunFam PTI1-like tyrosine-protein kinase 3 151 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02869 Pste-Chr4 20186802 20189798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02869 61 354 Trihelix Transcription Factor Family AT5G38560 44.667 1.32e-86 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pste4g02869 PK_Tyr_Ser-Thr 1.2e-44 CL0016