Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02861 CGACGGTACCTTCCGTTTTCCGTCCAGCAAAACGCATTCACTTAATTTTGCCTCACTTTCTCGGCGGGCATTCCGTCAAGAAAATGGCGTGGAAGGTTTCGGTGGCGCTACGCATCCTCTTCTCCCTGGCACTCTTCTTCTCACCCTCGCAATCCGCGGTTTTCAGCGTAGATCTAGGTTCTGAATCGGTGAAGGTTGCGGTGGTGAACCTCAAGCCAGGCCAATCTCCGATCTCGATAGCGATCAACGAGATGTCCAAGCGTAAATCTCCCGCGCTCGTCTCCTTCCACGACGGCCACCGCCTCCTCGGCGAGGAGGCCGCCGCCCTCGTCGCCCGCTACCCGCACAAGGTCTATTCCCAAATGCGCGACCTCATCGCCAAACCCTACGCCTCTGCGCAGAGGATTCTCGACTCAATGTACCTTCCATTCGAGGCCAAGCCAGATTCCCGAGGCGGCATGAGTATAGTCGTTGACAACGAAAACGACGCCGTCTACTCCCCCGAGGAACTGGTCGCCATGGTGCTAGGCTACGCGGTGCATTTGGCCGAGTTTCACTCCAAGATTCCCATCAAGGACGCGGTTATCTCGGTTCCGCCCTACATGGGGCAGGCCGAGCGGAGAGGGTTGCTTCAGGCGGCTCAGTTAGCGGGGATTAATGTTTTGTCTCTTATAAACGAGCATTCCGGTGCGGCGATGCAGTATGGGATCGACAAGGACTTTTCTAACGATTCTCGCCACGTGATTTTCTACGACATGGGTGCTAGCAGTACCTATGCAGCGCTTGTGTATTTCTCGTCTTACAAGAGTAAGGAGTTTGGGAAGAGCGTTTCGGTGAACCAGTTTCACGTGAAGGATGTGCGTTGGATCCCTGAGCTTGGTGGTCAGCACATGGAGTTGCGATTGGTCGAGTATTTTGCTGACCAGTTCAATTCGCAACTTGGTGGTGCAATCGACGTCAGGAAATTCCCCAAGGCTATGGCCAAGTTGAAGAAACAGGTTAAGCGAACTAAAGAAATTCTTAGTGCTAACACAGCAGCTCCTATTTCAGTTGAATCGCTTCATGATGACGTCGACTTCAGGAGCACAATAACTCGTGAGAAATTTGAGGAGCTCTGTGAGGACATTTGGGAAAAATCGCTTTTACCTGTGAAAGAGGTGCTTGAGCATTCTGGCCTATCATTGGAGCAAATATATGCAGTGGAGTTGATTGGAGGTGCCACGAGAGTGCCAAAATTACAGGCTAAGCTTCAAGAATTTCTTGGGAGAAAGGAACTTGATAGGCATCTTGATGCTGATGAAGCAATAGTTCTTGGTGCAGCTCTGCACGCTGCAAATTTAAGTGATGGAATCAAATTGAACCGCAAACTAGGAATGGTTGATGGTTCCTTATATGGATTTGTGGTTGAGTTGAATGGTCCTGATCTTTTAAAAGATGAAAGCTCTAGGCAGCTACTTGTACCACGGATGAAGAAAGTCCCGAGTAAGATGTTTAGATCTGTTAATCATAACAAAGATTTTGAAGTTTCACTGGCTTATGAAAGTGAGCATCAGTTACCTCCTGGTGTTACCTCTCCTGAAATAGCTCAATACCAGATATCTGGTTTGACAGATGCAAGTGACAAATATTCTTCTCGGAACTTGTCATCCCCCATCAAGGCAAACATACATTTTTCTCTTAGTAGAAGTGGAATTCTTTCTCTGGATCGGGCAGATGCTGTTATTGAAATAACAGAGTGGGTAGAAGTTCCTAGGAAGAATTTGACCATAGAGAATTCAACCATTTCATCAAATGTTTCGGCTGAATCTGCTACTGGTAACAGTACTGAGGAAAACAATGAAAGCATGCACACTGATAGTGGGATTAATAAGACATCCAGCAGTAATGCTGAGGAGCAAGCTACTGCTGAACCTGCTACTGAAAAAAAGTTGAAAAAGCGGACCTTCAGGGTACCATTAAAGATTGTTGAGAAGATAACTGGACTTGGAATGTCTCTATCACAAGATTTTCTTGCTGAAGCCAAAAGAAAATTACAAGTACTGGATAAAAAAGATGCAGACAGAAAAAGAACAGCTGAGTTAAAAAATAATTTAGAAGGATATATATATACAACTAAGGAAAAGATTGAAACTGTTGAAGAGTTAGAAAAAGTTTCTACAAGTGAGGAACGGCAGTCCTTCATTGAGAAGCTTGACCAGGTGCAAGATTGGTTATATACAGATGGTGAAGATGCCAATGCCACAGAGTTTGAAGAGCGTCTAGATCAGTTAAAATCTGTTGGAGATCCAATTTTCTTCAGGTTAAAAGAGCTTACAGCTCGACCTGCTTCTGTTGAGCATGCTCATAAATATATTGATGAGTTGAAACAGATTATTCAACAGTGGAAAACAAGCAAGCCTTGGCTTCCACAAGAACGAGTGGATGAGGTTCTAAATAGTTCTGAAAAGTTAAAGAATTGGTTGGATGAGAAAGAAGCTGAGCAAAAGAAGGCTTCTGGATTCAGTAAGCCAGCATTTACATCTGAAGAAGTATATTTAAAGGTGCTTGATCTGCAAAACAAGGTTGCCAGTATTAATAGAATTCCCAAGCCCAAACCTAAGGTTCAGAAACCGGTGAAGAATGAATCCGAGAGCAGTGAGCAGGATACGGATAATTCCAATTCTACTTCTACTGATAGTTCCTCTTCAAATGATTCATCAGATAACAATTCAGAAGGCACAAGCGAAGAAACAGTTACCGAGGAAGCTGAAGGTCATGATGAACTATGA 2768 0.4487 MAWKVSVALRILFSLALFFSPSQSAVFSVDLGSESVKVAVVNLKPGQSPISIAINEMSKRKSPALVSFHDGHRLLGEEAAALVARYPHKVYSQMRDLIAKPYASAQRILDSMYLPFEAKPDSRGGMSIVVDNENDAVYSPEELVAMVLGYAVHLAEFHSKIPIKDAVISVPPYMGQAERRGLLQAAQLAGINVLSLINEHSGAAMQYGIDKDFSNDSRHVIFYDMGASSTYAALVYFSSYKSKEFGKSVSVNQFHVKDVRWIPELGGQHMELRLVEYFADQFNSQLGGAIDVRKFPKAMAKLKKQVKRTKEILSANTAAPISVESLHDDVDFRSTITREKFEELCEDIWEKSLLPVKEVLEHSGLSLEQIYAVELIGGATRVPKLQAKLQEFLGRKELDRHLDADEAIVLGAALHAANLSDGIKLNRKLGMVDGSLYGFVVELNGPDLLKDESSRQLLVPRMKKVPSKMFRSVNHNKDFEVSLAYESEHQLPPGVTSPEIAQYQISGLTDASDKYSSRNLSSPIKANIHFSLSRSGILSLDRADAVIEITEWVEVPRKNLTIENSTISSNVSAESATGNSTEENNESMHTDSGINKTSSSNAEEQATAEPATEKKLKKRTFRVPLKIVEKITGLGMSLSQDFLAEAKRKLQVLDKKDADRKRTAELKNNLEGYIYTTKEKIETVEELEKVSTSEERQSFIEKLDQVQDWLYTDGEDANATEFEERLDQLKSVGDPIFFRLKELTARPASVEHAHKYIDELKQIIQQWKTSKPWLPQERVDEVLNSSEKLKNWLDEKEAEQKKASGFSKPAFTSEEVYLKVLDLQNKVASINRIPKPKPKVQKPVKNESESSEQDTDNSNSTSTDSSSSNDSSDNNSEGTSEETVTEEAEGHDEL 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02861 894 Gene3D Actin; Chain A, domain 4 266 351 - -
Pste4g02861 894 PANTHER HSC70CB, ISOFORM G-RELATED 24 868 - -
Pste4g02861 894 PRINTS 70kDa heat shock protein signature 25 38 - -
Pste4g02861 894 PRINTS 70kDa heat shock protein signature 57 69 - -
Pste4g02861 894 PRINTS 70kDa heat shock protein signature 370 386 - -
Pste4g02861 894 PRINTS 70kDa heat shock protein signature 166 186 - -
Pste4g02861 894 PRINTS 70kDa heat shock protein signature 402 422 - -
Pste4g02861 894 CDD HYOU1-like_NBD 28 417 - -
Pste4g02861 894 MobiDBLite consensus disorder prediction 570 607 - -
Pste4g02861 894 FunFam Heat shock 70 kDa protein 4 638 750 - -
Pste4g02861 894 FunFam Heat shock 70 kDa protein 4 266 351 - -
Pste4g02861 894 FunFam Heat shock 70 kDa protein 17 427 573 - -
Pste4g02861 894 Gene3D - 212 399 - -
Pste4g02861 894 MobiDBLite consensus disorder prediction 570 615 - -
Pste4g02861 894 MobiDBLite consensus disorder prediction 853 879 - -
Pste4g02861 894 ProSitePatterns Heat shock hsp70 proteins family signature 3. 373 387 IPR018181 -
Pste4g02861 894 Gene3D - 92 146 - -
Pste4g02861 894 MobiDBLite consensus disorder prediction 880 894 - -
Pste4g02861 894 Gene3D - 29 417 - -
Pste4g02861 894 Gene3D - 638 752 IPR029048 -
Pste4g02861 894 MobiDBLite consensus disorder prediction 828 894 - -
Pste4g02861 894 SUPERFAMILY Actin-like ATPase domain 26 211 IPR043129 -
Pste4g02861 894 Pfam Hsp70 protein 27 738 IPR013126 GO:0005524|GO:0140662
Pste4g02861 894 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 665 747 IPR029048 -
Pste4g02861 894 SUPERFAMILY Actin-like ATPase domain 217 419 IPR043129 -
Pste4g02861 894 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 427 621 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02861 Pste-Chr4 20116681 20125342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02861 22 740 Calmodulin-binding Proteins AT3G12580 25.482 1.62e-61 219