Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02850 ATGGCGGCAGGACTCTCCACCGCCGCAAACTTAAAGTCCTACAACCTCCTCCAACCCTCACACCCTCTTTCTAAACCAACCCCCTTAAGATGTTTCCATCATCACACTACAATCTTTCCGCTTCCACCCTCAACAAGAATCACTGCCTTCACCGTTTGCGTCCTCACGGAGGATCCCAAACGGAACCTCCAGATCAAAACTGAAGAAGAAGAAGAAGAAGAAGTGAAAGCTCAAGTTGTGTCCTCTCGAGTGGCAGAGAAATTGGCAAGGAAGAAGTCCCAGAGGTTCACTTACCTCGTTGCAGCTGTCATGTCTACCTTTGGCATTACCTCTATGGCAGTCTTCGCCGTTTATTATAGATTCTCCTGGCAAATGGAGGGTGGAGATGTTCCTTGGTCTGAAATGCTAGGCACATTTTCCCTCTCCGTCGGTGCTGCTGTGGCTATGGAGTTTTGGGCAAGATGGGCTCATAGAGTTCTTTGGCATGCTTCCTTGTGGAACATGCACGAGTCACACCATCGACCAAGAGAGGTACCCTTCGAGCTTAACGACGTTTTTGCAATAATTAACGCTGTCCCTGCAATTGCTCTTCTCTCTTACGGGTTTTTTCACAAGGGATTGGTCCCTGGCCTCTGTTTTGGTGCAGGCCTTGGAATCACGGTGTTTGGGATGGCCTACATGTTTGTCCACGATGGATTGGTTCATAAGAGATTCCCTGTGGGTCCCATTGCCAGCGTGCCCTACTTCAGAACAGTTGCGGCTGCTCACCAACTTCATCATTCGGACAAATTCAACGGGGTGCCTTATGGGCTGTTTTTGGGACCTAAGGAAGTTGAAGAAGTGGGAGGGCTGGAAGAGCTAGAGAAAGAGATAAGTTGGAGAATGAGATCCGGTTCATGACCATGCCCCCGGTATTAGAGTTGCAATTGAAAAAATTGAGTGTAGAGTAAAGGGAAACTACACTTATTGAATCAAATTATCATGATTTGAATTTTTTGCTTTCATGCATAGCTATTCTCATATTATAGCAGAATATATAATAGAAAAATAGTTTAAAAATTTAGATATATGACGA 1075 0.4567 MAAGLSTAANLKSYNLLQPSHPLSKPTPLRCFHHHTTIFPLPPSTRITAFTVCVLTEDPKRNLQIKTEEEEEEEVKAQVVSSRVAEKLARKKSQRFTYLVAAVMSTFGITSMAVFAVYYRFSWQMEGGDVPWSEMLGTFSLSVGAAVAMEFWARWAHRVLWHASLWNMHESHHRPREVPFELNDVFAIINAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIASVPYFRTVAAAHQLHHSDKFNGVPYGLFLGPKEVEEVGGLEELEKEISWRMRSGS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02850 299 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 297 IPR045019 GO:0016491
Pste4g02850 299 Pfam Fatty acid hydroxylase 145 272 IPR006694 GO:0005506|GO:0008610|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02850 Pste-Chr4 20004890 20007193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02850 1 215 Chloroplast and Mitochondria Gene Families AT4G25700 60.268 3.72e-89 263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste9g01131 9 8554873 8557578 Pste4g02850 4 20004890 20007193 ECH
Pste4g02850 4 20004890 20007193 Pste4g02850 4 20004890 20007193 ECH
Pste9g01131 9 8554873 8557578 Pste4g02850 4 20004890 20007193 PCT