Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02846 ATGGACAAGACACTCTCCACAACAACAACAACCTCCGAGAAAGAAACCCACGACTTCATGAACGTCGACTCCTTCTCCCAACTCCCCTTCATCCGCCCGGCTCCTCTTGTCAAAGAAAAGTCAGGCATTCGCCTCTTCGGCATCGAGTTCGCCGGTGGAAACAATAGCACTGTTGTTTCCACCGGCGAACCTGAGTCTGCCGAAGAAGACACAACAACCAACAACAATCTCAACTCCTTCGACTTGGACTCGTCCAAAATAAACGAGTCCACGGTCACTGTCACTGCCACCACTACTATTACTAATGGCGAAAACAGCCGCCGCTTCGAGTGCCACTACTGCTGCCGCAACTTCCCCACCTCGCAAGCCCTCGGCGGCCACCAAAACGCGCACAAACGCGAACGCCAACACGCCAAACGCGCGCACCTTCAGTCATCAATGGTGCACGGAACCTCCTTCTCCGACGCGCACCACGTCTACAACCTCATGAACTACCGCTTTGGTTCCACTGCCACACCACCACCAATGCCTTACCCAACATCATGGAACAACAACAACAACAACATCAACACCAACAGCACCACGAGCTTCTACGGAACGACGTCGTTCTCTCACCACCACCACCAGAACCACCAACAACAACAACCCATTAACGGAAGCCCGTTGGCGTTTTGGCGAATCCCTAATAATAACCCTAGTTTCAGCCACGAACGTTCCTTGCCGCCTTTATTCGCCACGGAGGACATAACCAACGTGAGAGCCTCGCAGGTTGTCGGAGCCTCGGGCTCCCAAAACCGCTACGTGTATGACTCCAAACGCGGCACTGTCCACGACCATGTGAGTTTGGATCTTCATCTGTAA 861 0.5343 MDKTLSTTTTTSEKETHDFMNVDSFSQLPFIRPAPLVKEKSGIRLFGIEFAGGNNSTVVSTGEPESAEEDTTTNNNLNSFDLDSSKINESTVTVTATTTITNGENSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSSMVHGTSFSDAHHVYNLMNYRFGSTATPPPMPYPTSWNNNNNNINTNSTTSFYGTTSFSHHHHQNHQQQQPINGSPLAFWRIPNNNPSFSHERSLPPLFATEDITNVRASQVVGASGSQNRYVYDSKRGTVHDHVSLDLHL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02846 286 ProSitePatterns Zinc finger C2H2 type domain signature. 111 131 IPR013087 -
Pste4g02846 286 SUPERFAMILY beta-beta-alpha zinc fingers 106 137 IPR036236 -
Pste4g02846 286 PANTHER ZINC FINGER PROTEIN GIS 3 286 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Pste4g02846 286 ProSiteProfiles Zinc finger C2H2 type domain profile. 109 136 IPR013087 -
Pste4g02846 286 Gene3D Classic Zinc Finger 83 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02846 Pste-Chr4 19972767 19973627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02846 10 286 C2H2 Transcription Factor Family AT2G41940 38.047 2.12e-41 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02846 4 19972767 19973627 Pste4g02846 4 19972767 19973627 ECH
Pste5g00655 5 4246782 4247483 Pste4g02846 4 19972767 19973627 PCT