Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02823 AAGAAATACCACACTCAACTTTCATCTGCTTTATAGCCATACCCCTAACTCTCTTTCTTCCATATTCTCTCTGCTTGCGTAAATGGCTGAAGACTGGGATCTCTTTGCCATCGTGCGAAGCTGCCAATCAGCCACCACACCAATTCCACAAATCACCACAAATAATACTTCCTCTTCTTTGCTCACTTCCACTGTCCAGGAACAAAACTATGATGCATTTTCCTTTCCCAATATAGTGCAACCTATAACCAATGAATTTCAAGAGCTACACCAACTTTTCACATCCTTTAACCCCACCACCACCAACACCACTACACCTAGTGCTCCAGGCATCAATCCCAATTCCCCTTATTTTCCACAACAACAGGAAAGGAAACAATTCAGTGATCACCTTCCTATTTCGCCTCATTTTGTGCCACCACCTGCCTCCACTCCCAGTTTCAACAGATTCCATCACCAACAACAACAGCTAGAGAATCCACTACAGCTAGTTCAGCAACAGGAATTTCAACTACCCCACAACAATTCTCCCACACTTTCACTAAATACACAACCTCAAACACCCAAATCAAGAAAAAGAAAAAGCCAACAGAAGAAAATGGTGTGTCATGTAACTGCAGATAACCTCTCAGCAGATTTGTGGGCATGGCGAAAATACGGACAAAAACCAATTAAAGGTTCTCCATTTCCGAGGAACTATTATAGGTGCAGCAGTTCCAAAGGTTGTATGGCTCGAAAACAAGTTGAACGGAGTAACACTGACCCCGACATGTTCATCGTTACGTACACCGGTGATCACTCGCATCCCCGGCCAACCCACCGGAACTCGCTCGCCGGAAGTACCCGGAGCAAGACTCCGACAACAAATCCTCCGCCGTCATCCGGGTCGCTTTCCACCTTCCAAGCCACAGCCTTTACTTCTTCTTCTTCTTCGCCACCGCACTCTCCGAGGACGCCGTCGGAGGAGCTACCGGAAACCGGAGAAATAGAACCCGACCCAGAAATGGAAACTGACGTGGACGACGACGCTGACACATGATAGCCATCTTGTCCAGCAAGTTTCCCAGGGTTTCGTCGTCGTCGTCACGGACTCGAAGAACCGAACCGGTTTAATTTTGAGTTATTTTGAACCGGTTGAGATCTCCCAGACCGGCTCCCGTTGACGCCGTTGGATTATGATTGTGCGTGGATCCGGAGAAGCTGTCTGATTTCATTCTCCAAAATCCAAATCGAAGTCGTACACTTGAATCTTGAGCGCAGAATGGTTCTCCTCGACAATCTGCCACGTGGGTAACCCACTTAATATCTTTTTTTCCCCCTTAAAATAAAGGACATAGCCAAAATACATGATTCAGAAAACAAAGAATTAGAATTTTTGTTTAATGCAATAGGTGACTAAGTCAAAGTTTGAAGGTTGTGCCTCATTGTCAACACGGCAAGCATAACGCCAAAGCACATGCAATCTAAAATAGATACCAAGTTTACTCTGAATTTGTAGTATATTTTTTTAATCATTTTGATTCCGTTTGTGTAAATAAGATAAGATAATTATAAGTATAAATGG 1564 0.4431 MAEDWDLFAIVRSCQSATTPIPQITTNNTSSSLLTSTVQEQNYDAFSFPNIVQPITNEFQELHQLFTSFNPTTTNTTTPSAPGINPNSPYFPQQQERKQFSDHLPISPHFVPPPASTPSFNRFHHQQQQLENPLQLVQQQEFQLPHNNSPTLSLNTQPQTPKSRKRKSQQKKMVCHVTADNLSADLWAWRKYGQKPIKGSPFPRNYYRCSSSKGCMARKQVERSNTDPDMFIVTYTGDHSHPRPTHRNSLAGSTRSKTPTTNPPPSSGSLSTFQATAFTSSSSSPPHSPRTPSEELPETGEIEPDPEMETDVDDDADT 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02823 318 MobiDBLite consensus disorder prediction 74 130 - -
Pste4g02823 318 MobiDBLite consensus disorder prediction 145 163 - -
Pste4g02823 318 MobiDBLite consensus disorder prediction 227 318 - -
Pste4g02823 318 MobiDBLite consensus disorder prediction 74 101 - -
Pste4g02823 318 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 294 IPR044810 GO:0003700
Pste4g02823 318 ProSiteProfiles WRKY domain profile. 178 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste4g02823 318 Pfam WRKY DNA -binding domain 185 242 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste4g02823 318 FunFam WRKY transcription factor 22 166 237 - -
Pste4g02823 318 MobiDBLite consensus disorder prediction 298 318 - -
Pste4g02823 318 Gene3D WRKY domain 166 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste4g02823 318 MobiDBLite consensus disorder prediction 145 174 - -
Pste4g02823 318 SMART WRKY_cls 183 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste4g02823 318 SUPERFAMILY WRKY DNA-binding domain 178 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste4g02823 318 MobiDBLite consensus disorder prediction 246 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02823 Pste-Chr4 19849757 19851548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02823 162 265 WRKY Transcription Factor Family AT5G52830 79.808 5.32e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste4g02823 WRKY 4.5e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01976 6 9161724 9163741 Pste4g02823 4 19849757 19851548 ECH
Pste5g01289 5 8295081 8297038 Pste4g02823 4 19849757 19851548 ECH
Pste6g00804 6 3090607 3095432 Pste4g02823 4 19849757 19851548 ECH
Pste4g02823 4 19849757 19851548 Pste4g02823 4 19849757 19851548 ECH