Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02815 GGAAGAATAAGAAATAAGAAATGGCTGTGCCATCTTTATTCTCACGCCGCTTCTTCAGAAAGCCGTTTACTCTCTTCTTCTATTCCTCATTCTCCACCACCGCTGCCACCTCATCGCCGCCGCCCATCCACGTCGCCCTCACTGAGTCTGTGGGCCGCGCCGTCTTCGCCACCCGCCCCATCGGCTCCGGCGACCTCATCCACACCGCCACCCCGCCGTCTGCCACCCCTCCTCCACCCGCGCCGCCTGCTACTCCTGCCTCGCCGCGCTCCCCACTCCCAACCTCACACCGTGACCTTCTGCAGCCAACTTTGCCGCCAACGCTCTAAGGGATATTTCGACGTTGAGATGAAAGCAAATTGGGTGGCTTTTGATGACTATTGCCGGACCCATGGTTTGAAATATCCCTTACTGGTAAAGCGATTGGCTTGCATGGTCATATCAGGAGATGCCAGCAGTGACACTCTCGACATACTTCAGCCTGCCAATTTGATTCCTGAGACAGTTTTGGAGATGGAAGAGGAATTTGTCTTGCTGAGGAATGCCTTCACAAAGGCACTTATTGCAGATGAACATATTGCCTTTTTAACTAAGCAATGGTACATTAACGTTTTGGCACGAATTCGAATCAATGCATTTCGCATTGAGTTGGCCGGAGGATTATATGAAGATCTTCTTGCATCAGCAGTTGCATCTGTGGAAGCAGAAGCTGCTGTTGGAAATGCTGTCTATATACTTCCATCCTTCTACAATCATGATTGTGATCCTAATGCACACATTATATGGATAAATAATGCTGATGCAAAATTGAAGGCACTCCGTGACATTGATGAAGGTGAAGAACTCAGAATCTGCTATATTGATGCCAGCCTGGATCATGATGCTCGGCGAGAGCTACTGCTTCGAGGTTTTGGTTTTCAATGCAATTGTAGCAGGTGCTTGCATGGCGATTAATCATTCTTGTCTTATGTTTACTCCAGGATTTTGCTATGTTTAGTGGTCCTATAATTGCAAAATTCCCCAACTGAGTTATATAATGTGCATTCTTTTGGGGAGAAAGGACGGGAAAGAAAGAGTAATAAGGATTTTCAATTCCAAACATAATATTATTCATGTTTTAGTTCTTTTTTACCCTGGACTTTCCTTACTGCAGAGGCCTTGTCCTCTATCGAATTGCTTAATATAGAATTGTAGTGATATGATTTTTTAATTTTCCACTTTCT 1223 0.4563 GRIRNKKWLCHLYSHAASSESRLLSSSIPHSPPPLPPHRRRPSTSPSLSLWAAPSSPPAPSAPATSSTPPPRRLPPLLHPRRLLLLPRRAPHSQPHTVTFCSQLCRQRSKGYFDVEMKANWVAFDDYCRTHGLKYPLLVKRLACMVISGDASSDTLDILQPANLIPETVLEMEEEFVLLRNAFTKALIADEHIAFLTKQWYINVLARIRINAFRIELAGGLYEDLLASAVASVEAEAAVGNAVYILPSFYNHDCDPNAHIIWINNADAKLKALRDIDEGEELRICYIDASLDHDARRELLLRGFGFQCNCSRCLHGD 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02815 317 Gene3D - 94 130 - -
Pste4g02815 317 Gene3D - 131 212 - -
Pste4g02815 317 ProSiteProfiles SET domain profile. 174 287 IPR001214 GO:0005515
Pste4g02815 317 MobiDBLite consensus disorder prediction 19 76 - -
Pste4g02815 317 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 93 315 - -
Pste4g02815 317 CDD SET_SMYD 240 313 - -
Pste4g02815 317 Gene3D SET domain 213 313 IPR046341 -
Pste4g02815 317 MobiDBLite consensus disorder prediction 56 76 - -
Pste4g02815 317 Pfam SET domain 218 286 IPR001214 GO:0005515
Pste4g02815 317 SUPERFAMILY SET domain 241 313 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02815 Pste-Chr4 19815516 19821439 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste4g02815 SET 1.5e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02815 4 19815516 19821439 Pste4g02815 4 19815516 19821439 ECH