Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02810 ATGGAAGAGGTTAGAAGCTACAAAGTGACGGCGAGGGAAATCAGTTACAGGAAATCAGCGTCATCATTGGTGTGGTTGTTGAAAACATCGAGTCCGACGTACATTCTGAAAGACGTGTCCCTGACAGCCCATCCGTCGCAGATACTGGCCATTGTGGGGCCGAGCGGTGCGGGCAAGTCGACTCTGCTTGACATCCTGGCCGCCCGCACCCTACCATCCGATGGGTCCCTCCTCCTGAACTCCTCCCCTCTGATCCCTTCCTCCTTCCGCAAGCTATCCTCCTACGTCCCACAGCACGACCACTCCCTCCCCCTCCTCACAGTCTCCGAGACCTTCCTCTTCTCCGCCTCCCTCCTCCACCCCGCCTCCCCGACCTCCCTCCCTCGTCTCCTCCCTCCTCTCCCAGCTCTCCCTCTCCACCTCGCCCACACCCCCCTCTCCCCTGGCCTCTCCGGTGGCGAACGCCGCCGTGTCTCCATTGGACTCTCTCTCCTCCACGACCCCTCCGTCCTCCTCCTCGACGAACCCACTTCCGGCCTCGACAGCACCTCCGCCTTCAACCTCATCCAGATCCTCAAGCACACTTCCCTCTCTCGCAACAGAACCGTCATCCTCTCCATCCACCAGCCCAGCTTCAAGATCCTCTCCTGCATTGATTCCATCCTTTTGCTCTCCAAAGGTACCGTCGTTCATCATGGATCCCTTTCCTCCTTGCAGACCTTCTTGCACTCCCACGGCTTCACCGTCCCTCATCAACTCAACCCCTTGGAGTATGCCATGGAGATACTTCACCACCTCAACCCTCCCCCCTCCACTTGCACCACTTCTCCTGTTTCTCACACCCCTACTCCTACTCCTACTCACACTCACACTCACACCCACACCATCAGGTATAAAAGCTCTCGCCTCCATGAGATTTTCACTCTTTATACCAGGTTTTGGAAGATTATATACAGAACCAGGCAACTTCTTTTCACCAACACCGCCGAAGCACTTGTGGTGGGCCTTGTCTTGGGAACTATTTATATCAACATTGGCTTTGGTAAACAAGGCATTGAGAAAAGGTTCGGTCTCTTTGCCTTCACTCTCACCTTCCTCCTCTCCTCCACCACCGAAACCCTTCCCATCTTCATCAACGAGAGGCCAATCTTGCTCAGAGAAACCTCCAGTGGCCTTTACAGGCTCTCCTCCTATCTCATTGCAAACACGCTTGTTTTCTTCCCCTACTTGTTCGTCGTTGCTCTCCTTTACTCCATTCCTGTCTACTTCTTGGTCGGTCTCTGCGCTTCCTGGCTCTCTTTTGCTTACTTTGTTTTAGTCATTTGGGTCATTGTTCTCATGGCCAACTCCTTCGTTCTCTTCTTGAGCTCCATTGCACCCAACTACATTGCCGGCACTTCGCTCCTCGCGCTGCTTCTTGCCGCCTTTTTTCTCTTCTCCGGATACTTCATCTCCAGGGACAGCCTGCCCAAGTACTGGCTCTTCATGCACTTCTTCTCCATGTACAAATATGCTCTTGATGCTCTTCTCATCAACGAGTACTCCTGCTTGATGACCAAGTGTTTCATATGGTACCAAGAGAATCAACACTGCATGCTAACCGCTGCTGACGTCCTACACAACAAGGGCCTCAATCACACTCACAGGTGGACCAATGTCTACTTCTTGATCGCCTTCTTTCTGCTCTATCGTCTGCTTTGCTTCCTCGTTTTGCTTAGGAGGGTTTCCAGATCCAAAACTTGA 1743 0.5313 MEEVRSYKVTAREISYRKSASSLVWLLKTSSPTYILKDVSLTAHPSQILAIVGPSGAGKSTLLDILAARTLPSDGSLLLNSSPLIPSSFRKLSSYVPQHDHSLPLLTVSETFLFSASLLHPASPTSLPRLLPPLPALPLHLAHTPLSPGLSGGERRRVSIGLSLLHDPSVLLLDEPTSGLDSTSAFNLIQILKHTSLSRNRTVILSIHQPSFKILSCIDSILLLSKGTVVHHGSLSSLQTFLHSHGFTVPHQLNPLEYAMEILHHLNPPPSTCTTSPVSHTPTPTPTHTHTHTHTIRYKSSRLHEIFTLYTRFWKIIYRTRQLLFTNTAEALVVGLVLGTIYINIGFGKQGIEKRFGLFAFTLTFLLSSTTETLPIFINERPILLRETSSGLYRLSSYLIANTLVFFPYLFVVALLYSIPVYFLVGLCASWLSFAYFVLVIWVIVLMANSFVLFLSSIAPNYIAGTSLLALLLAAFFLFSGYFISRDSLPKYWLFMHFFSMYKYALDALLINEYSCLMTKCFIWYQENQHCMLTAADVLHNKGLNHTHRWTNVYFLIAFFLLYRLLCFLVLLRRVSRSKT 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02810 580 Pfam ABC-2 type transporter 208 270 IPR043926 GO:0140359
Pste4g02810 580 ProSitePatterns ABC transporters family signature. 150 164 IPR017871 GO:0005524|GO:0016887
Pste4g02810 580 Pfam ABC transporter 36 178 IPR003439 GO:0005524
Pste4g02810 580 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 244 IPR027417 -
Pste4g02810 580 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 12 565 - -
Pste4g02810 580 SMART AAA_5 45 228 IPR003593 GO:0016887
Pste4g02810 580 Pfam ABC-2 type transporter 305 514 IPR013525 GO:0016020|GO:0140359
Pste4g02810 580 Gene3D - 24 246 IPR027417 -
Pste4g02810 580 FunFam ATP-binding cassette transporter 26 244 - -
Pste4g02810 580 MobiDBLite consensus disorder prediction 271 291 - -
Pste4g02810 580 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 9 251 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02810 Pste-Chr4 19790547 19792289 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02810 35 238 Calmodulin-binding Proteins AT2G36910 28.636 7.28e-16 79.7