Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02794 TATCGTTACAATAACAAAATCAGATATACTATATTTTTAGCAGATTCATTCATTTCATTCTTCTTTCTTTTGCTATAAGGAATTTTGGGTTGATCACGGGAAGTACATAACTTAAGAGCAACACTAACTTGCTCTATATATAGATTACATAACAATGGCTAAACCCGCAACAGGGTCAGAATTCTTAAACCAAACCTTCCATTCGAGCACCCTTTGGGTTTGAAGACCCTACTTCTTGTGAGCTTCAAGAATCATTGACCTGTCTTCTATGAACTTCAACAATTCTGGTACCCTTTGTTGTAAAGGATCAAGTTTTTGTGTGCTAAATAAGGGGGGTTGTTATGGAACAGAGACCGGTTTTGTTGTCAGCAGCATTGAGTGTTGGGGTTGGATTGGGTGTTGGACTTGGATTGAGTACCGGACAGGCTGTTCAAAAATGGGTTGGAGCGAGTATTGAGTCTGATGAGATTTCTGGGGAGCAAATTGTGTTGGAGCTCAGCAAAAAAGTAATTGATGGGAAGAACAGCCAAATCACATTTCGAGATTTTCCTTATTACTTAAGTGAAAGAAGCCAACTTTTGTTAATAAATGCTGGGTATGTTTATTTAAAACAAGACTTTTCCAAGAACATGAGGAACCTTTGTCCTGAAAGCAGAGCTATTTTGCTTTCTGGTCCTGCAGAACTTTATCAGCAAAAGCTTGCACAAGCTTTAGCACATCACTTTGAATCGAAGTTACTGTTGCTAGACATTACTGACTTCTCGTTGGAGATGCAGAAGAAATACGGATGTCCCAGAAAAAACCCTTATTTTAAAAGGTCCATATCTGAGGTGACTCTGGAGCAAGTATCTGGTTTGTTTGGTTCCTTGTCGGTCCTTCCTTCAATATGCAAAACTAGAGGTATACTAAGTCGACAGAGTAGTGGAATTGAAAATTCCAGCAATCCTCTGAAGTTTCGTAGGAATGCCTCTACTGCATGTGATACGACTGCATCAGATCCAGCTCCTTTGAAGTGCACAAGCAGCTTCTGTTTTGATGAAAAGCTCTTCGTGCAGTCACTTTATAAGGTCTTGGTTTCTATCTCAGAAACCAGTTCCATTATTTTATATATCAAGGATGTTGAGAAGCTCTTTGTTCGATCACCAAGGCTACACAATTTGTTCCAAAATTTAATAAAGAAACTTTTAGGATCAGTTTTAATACTCGGTTCCCAAATCTTTGATTGTGAAAATGATTGTACAGAAATTGATGAAAAGCTTACTATGTTATTCCCTTACAACATTGAGATCAAACCACCTCAAGATGCGACCGATCTTGCAACCTGGAAAACAAAACTGAAAGATGACATGAAAACAATTCAGTTTCAAGATAGCAGAAATCAAATTGCTGAAGTACTTGCAGCAAATGATGTTGATTGTGATGACTTGGATTCAGTCCACCATGCCAACACTATGCTACTCAATAATCGCATTGAAGAGATTGTGGCATCTGCAATTTCTCATCACCTGATGGAGACTAAATATCCAGAATACCGAAATAGAAAACTAGTTATATCAGCAAAGAGTTTGTCCCATGTATTGAATCTGTTCCAGGAAACTGAAAATAATCCAGAGACTAAAGATTCAAACAAGGAAGTGCCTCCTGACAATGAGTTTGAGAAGCGTTTGAGAGCAGAGGTTGTACCTGCAAATGAGATAGGGGTTACATTTGAAGATATTGGTGCATTGGATGATATTAAAGAATTACTTCAAGACGAGGTTATGCTTCCCCTGAGAAGACCAGACTTATTCAAAGGTGGGCTTCTGAAGCCTTATAAAGGTATATTGCTTTTTGGACCTCCTGGCACAGGAAAAACAATGCTAGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGTTTCATTAATGTCTCAATCTCTAACATCACTTCAAAGTGGTTTGGAGACGATGAAAAGAATATCCGAGCTCTATTTTCTCTAGCAGCAAAGGTTGCTCCGACTATTATTTTCATTGATGAGGTTGATAGCATGCTTGGGCAGCGAGCTAAACATGGAGAGCATGAGGCAATGAGAAAGATTAAAAATGAATTCATGGTCCACTGGGATGGGCTATTGTCAAAACCTGGTGCGCGAATTCTGGTTCTTGCTGCAACTAACAGGCCATTTGACCTTGATGAAGCAATTATAAGACGGTTTGAACGCAGGATCATGGTTAATCTTCCATCTGCTGAGAACAGGGAAGTGATCTTGAAAACTCTCCTAGCTAAAGAAAAATATGAAAATATAGACTTCAAAGAGCTTTCAACCATAACAGAAGGATATAGTGGAAGTGATCTTAAGAACTTGTGCACAGCTGCTGCCTATCGACCTGTCAGAGAGCTACTACAACAGGAGAGGTTGAAGGAAAAGGAAAAGAAGAAGATGGAGGCAGAAGTTCAAAGCTCAGAAAATAGTTTAGATGCTAATGAAGATAAAGAAAACCAAGTGATTACTTTGAGGCCTTTAAACATGGAAGACATGAGACAAGCAAAGAGTCAGGTGACTGCAAGTTTTGCTGCAGATGGATCAATAATGAGTGAGCTGAAGGAGTGGAATGAATTGTTTGGAGAAGGAGGTTCAAGGAAGAAGCAACAGCATCTTACTTATTTCCTTTAGATTGCAGAAAGCAACAGCATCTTACTTATTTCCTTTGGAATTGTCAGTATCTATCACCAAATGATACCTTTTAAACAGGGAAGGAACCTTCAGCAGAGATATTGAACTCAAAGTGTTGCACAATCAGAAGTTTAAAAGATTTATCATCCCTGAAGTGCCATTTGAGTCCTACGAATGTGTAGAGCATCATGCATCATGTGTCTGCAAACCAGTGACAACATGTATTTAGGGGTACATTGTGTTATGACGTGGTTTTGATACATTCTGTGTTGGGAAATTGGAACAATTTACCACAAACCTTTTAGGTATATGACAATTTATGTATGAATAGCTGCAATGCTTAACTGCATCTAGCTGATGACAACCAAGTGGCCTCTAAACTTTAAATAAGGTTAATGTTCACATAGAAAAAGGGAAATGGTGAAAGGACTATTAATGAAGTATCTCCTATCTTTTTAAATTTTATTG 3119 0.3847 MEQRPVLLSAALSVGVGLGVGLGLSTGQAVQKWVGASIESDEISGEQIVLELSKKVIDGKNSQITFRDFPYYLSERSQLLLINAGYVYLKQDFSKNMRNLCPESRAILLSGPAELYQQKLAQALAHHFESKLLLLDITDFSLEMQKKYGCPRKNPYFKRSISEVTLEQVSGLFGSLSVLPSICKTRGILSRQSSGIENSSNPLKFRRNASTACDTTASDPAPLKCTSSFCFDEKLFVQSLYKVLVSISETSSIILYIKDVEKLFVRSPRLHNLFQNLIKKLLGSVLILGSQIFDCENDCTEIDEKLTMLFPYNIEIKPPQDATDLATWKTKLKDDMKTIQFQDSRNQIAEVLAANDVDCDDLDSVHHANTMLLNNRIEEIVASAISHHLMETKYPEYRNRKLVISAKSLSHVLNLFQETENNPETKDSNKEVPPDNEFEKRLRAEVVPANEIGVTFEDIGALDDIKELLQDEVMLPLRRPDLFKGGLLKPYKGILLFGPPGTGKTMLAKAIANEAGASFINVSISNITSKWFGDDEKNIRALFSLAAKVAPTIIFIDEVDSMLGQRAKHGEHEAMRKIKNEFMVHWDGLLSKPGARILVLAATNRPFDLDEAIIRRFERRIMVNLPSAENREVILKTLLAKEKYENIDFKELSTITEGYSGSDLKNLCTAAAYRPVRELLQQERLKEKEKKKMEAEVQSSENSLDANEDKENQVITLRPLNMEDMRQAKSQVTASFAADGSIMSELKEWNELFGEGGSRKKQQHLTYFL 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02794 769 Pfam ATPase family associated with various cellular activities (AAA) 494 624 IPR003959 GO:0005524|GO:0016887
Pste4g02794 769 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 453 681 IPR027417 -
Pste4g02794 769 Pfam AAA+ lid domain 646 682 IPR041569 -
Pste4g02794 769 Gene3D - 453 625 IPR027417 -
Pste4g02794 769 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 51 768 - -
Pste4g02794 769 Coils Coil 676 710 - -
Pste4g02794 769 SMART AAA_5 490 627 IPR003593 GO:0016887
Pste4g02794 769 ProSitePatterns AAA-protein family signature. 597 616 IPR003960 GO:0005524|GO:0016887
Pste4g02794 769 MobiDBLite consensus disorder prediction 687 710 - -
Pste4g02794 769 Gene3D - 626 699 - -
Pste4g02794 769 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 453 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02794 Pste-Chr4 19709133 19717557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02794 454 727 Calmodulin-binding Proteins AT3G56690 36.201 1.07e-45 174