Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02757 ATGATTGGATGTGCTTTACCATTTGCTGTTGCTGAGTTGAGCTTAGTCTTCTGTTCCATTTTCGGATCTTCCCCAGCACTAAAAACAACTACTCTTCAATCCTTGAGAACAATTGTTACCTTTGTTGTCGTTGTCTTTGGGAAGCAGTGGATGATGAGCATGGAAAAAGCAAACACATCCTTAGTGAGGACGAAGTCGGACCAGCTAGCGGAGACAATGATGGCGGCGATGAAGTCGCCGCCATCGAGTGACCACTCCGCGAACGGAGTGGTCGAAGGGGGCGGAAACCTATCGAGGAAGTCGAGCCGGCGGCTGACGGGGGCGTCGCCGGGGGGCGGCGGAAAGAACACACACATAAGGAAGTCAAGAAGTGCTCAAATAAGCCAAATAAAGTTGGAGCTAGATGATGTGAGTAGTGGTGCCGCACTTAGTAGAGCCTCAAGTGCTAGCTTGGGACTTTCATTCTCATTCACTGGCTTCACTATGCCTCCTGAAGAAATTGCTGATTCCAAACCCTTCAGTGATGATGATATCCCTGAGGACATCGAAACTGGACCTAGGACAAAGTTTCAAACGGAACCTACTCTACCAATATATCTAAAGTTCACGGATGTGACCTACAAGATAGTGATCAAAGGCATGACAACAACTGAGGAGAAGGATATCTTGAATGGGATCACTGGATCTGTAAATCCAGGGGAAGTTTTGGCATTGATGGGTCCCTCGGGAAGTGGAAAGACAACTCTTTTAAACCTTCTTGGAGGCAGGTTATGCCATCCTATAAGTGGTGGTTCTATCAGTTACAATGACCAAGCATATTCTAAGTTCCTTAAGAGCAGGATAGGATTTGTGACACAAGATGATGTTCTGTTTCCTCACTTAACTGTGAAAGAGACATTGACGTATGCAGCACGGCTAAGGTTGCCAAAGACATTCACAAAGGAGCAAAAGGAAAAACGAGCTTTAGATGTAATCTATGAACTTGGCCTAGAGAGGTGCCAAGACACTATGATTGGCGGTTCCTTTGTTCGTGGAGTATCTGGTGGTGAAAGGAAGAGGGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTTTTTCTTGATGAACCAACATCTGGTTTGGATTCTACAACAGCCTTGAGGATTGTTCAGATGCTCCAAGACATAGCAGAGGCTGGTAAAACAGTGGTGACAACAATCCACCAACCATCAAGCAGACTCTTTCACAAATTTGACAAGTTGATCCTTCTTGGAAAAGGGAGCTTGCTTTACTTTGGAAAAGCATCAGAAGCAATAACTTACTTCCATTCTATAGGATGTTCACCACTTATTTCCATGAACCCAGCAGAGTTTTTGCTAGACCTTGCTAATGGAAACATAAATGATGTTTCCCTACCTTCAGAGTTGGAAGATAAATATCTGGTGGAGGCATATGAAACTCGAGTAGCAGAAACAGAAAAGAAAAGATTAATGGTTCCTATACCCCTTGATGAAGAATTGAAGTCTAAAGTGTGTTCTCATAAGAGACAATGGGGAGCAAGTTGGGGTGAGCAATATTCCATATTATTTTGGAGAGGAATCAAAGAAAGGAGACATGACTATTTTAGCTGGTTGAGAATCACCCAAGTTTTATCCACTGCAGTCATCTTAGGATTACTCTGGTGGCAATCAGATGCTAAGAATCCAAAAGATCTACAAGATCAAAGAGCAATGCTGAGTAAGGAAAGAGCAGCAGATATGTACAGATTGAGTGCATACTTCCTGGCTAGAACCACAAGTGACCTTCCACTAGACCTCATTCTACCAGTGCTTTTTCTACTTGTTGTTTATTTCATGGCCGGTCTCAGACTCAGTGCTGCACCATTTTTCCTCACCATTCTCACTGTTTTCCTCTGTATAGTGGCTGCTCAGGGACTTGGACTTGCTATTGGGGCTACACTAATGGACTTGAAACGGGCTACAACATTAGCTTCGGTAACTGTGATGACCTTCATGCTGGCTGGAGGATTTTTTGTGCAGAGGGTCCCTATATTTTTTTCTTGGATCCGCTACATGTCTTTCAACTACCACACCTACAAACTTTTGCTCAAGGTGCAATATGAACACATCTCACATACCATAAATGGGATCAGAATTGATAGTGGAGCAACAGAGGTAGCTGCTCTAATAGCAATGGTTTTTGGTTACCGTTTCTTGGCGTATCTTTCTCTAAGGAGAATGAAACTTCAATCAGGAACTTAAATTAAAATTCACTCTTTGCATGAGGACTGAAGTAATGTCAAGTAAACAAAGTCTCACATGTAAGGAGGATCACCAGTTGATGTACCTAGCTAGAGATTCTGGCTTTTTTGTTTAGTCTTGTGAATATTGTATTAATTTCACTTAGCATGTTGAAACACCACTGTTCAAGCCACATGCATGCATGTTATCATGATAGGCACCACATGACACAGATATTTGTTTCCAGAGGTACTTAACTCTGCGAGAATGTTTAATTGACTGAATTAGCTTGTAACTGGTGTAGTGGAATAGTGGAAGGGTTTATCCATTTGCTACCTATGTAGCGTAGCTAAGTTGCTTACGCCATTTTGAAATGACAAATTTAGCACAAGCTACTCAACCATGAGACTAGAAATTCAATTTTGCAATAAATGAGAAAAGTATTAACATGG 2678 0.4227 MIGCALPFAVAELSLVFCSIFGSSPALKTTTLQSLRTIVTFVVVVFGKQWMMSMEKANTSLVRTKSDQLAETMMAAMKSPPSSDHSANGVVEGGGNLSRKSSRRLTGASPGGGGKNTHIRKSRSAQISQIKLELDDVSSGAALSRASSASLGLSFSFTGFTMPPEEIADSKPFSDDDIPEDIETGPRTKFQTEPTLPIYLKFTDVTYKIVIKGMTTTEEKDILNGITGSVNPGEVLALMGPSGSGKTTLLNLLGGRLCHPISGGSISYNDQAYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTFTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAITYFHSIGCSPLISMNPAEFLLDLANGNINDVSLPSELEDKYLVEAYETRVAETEKKRLMVPIPLDEELKSKVCSHKRQWGASWGEQYSILFWRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDAKNPKDLQDQRAMLSKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRLSAAPFFLTILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQRVPIFFSWIRYMSFNYHTYKLLLKVQYEHISHTINGIRIDSGATEVAALIAMVFGYRFLAYLSLRRMKLQSGT 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02757 748 ProSitePatterns ABC transporters family signature. 346 360 IPR017871 GO:0005524|GO:0016887
Pste4g02757 748 MobiDBLite consensus disorder prediction 78 122 - -
Pste4g02757 748 Pfam ABC-2 type transporter 570 702 IPR013525 GO:0016020|GO:0140359
Pste4g02757 748 CDD ABCG_EPDR 197 428 - -
Pste4g02757 748 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 200 446 IPR003439 GO:0005524
Pste4g02757 748 Pfam ABC transporter 223 374 IPR003439 GO:0005524
Pste4g02757 748 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 438 IPR027417 -
Pste4g02757 748 FunFam ABC transporter G family member 22 210 440 - -
Pste4g02757 748 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 180 736 - -
Pste4g02757 748 SMART AAA_5 232 423 IPR003593 GO:0016887
Pste4g02757 748 Gene3D - 199 440 IPR027417 -
Pste4g02757 748 Pfam ABC-2 type transporter 403 464 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02757 Pste-Chr4 19463694 19475045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02757 222 460 Calmodulin-binding Proteins AT2G36910 29.796 1.20e-15 79.7