Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02750 TTCATTCAGATCCCGGAGGTATTGATCCCTAGCTGAAAAGCGATTCCATTTTATTTATTTATTTATTTGAAGACGCTATAATCGATTGATTGTTATTGAAATTTGTAGAGCGACGTGTGTCAGTGAGTGACGATGGTAAGGGTTAGTGTGTTGAACGATGCTCTTAAGAGCATGTACAATGCCGAGAAAAGAGGGAAGCGTCAAGTGATGATTAGGCCATCTTCCAAGGTCATTATCAAATTCCTTTTGGTGATGCAGAAGCACGGGTACATTGGAGAGTTTGAGTATGTTGATGACCATAGGGCTGGCAAAATTGTGGTTGAATTGAATGGTAGACTGAACAAATGTGGGGTTATTAGTCCCCGATTTGATGTGGGTGTCAAAGAGATTGAAGGTTGGACTGCTAGGCTTCTTCCCTCTAGACAGTTTGGGTATATCGTATTGACTACCTCGGCTGGGATAATGGATCACGAAGAGGCTAGGAGAAAGAATGTAGGAGGGAAAGTCTTAGGTTTCTTCTACTAGGTTATTTTTCTATTTATTTCAATTTTGGATTCATCAGTTGTAATGGAGGATAAGCTAGTCCCGTAGTAATATCGAGCATATAGAAGTGCATGTTTTCTAATGTTTCATGTTTGCTAAATCAAGTTGGTCACTATAACTTTTCTGTTTTCTTT 677 0.3929 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02750 130 Gene3D - 70 130 - -
Pste4g02750 130 Hamap 30S ribosomal protein S8 [rpsH]. 2 130 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pste4g02750 130 ProSitePatterns Ribosomal protein S8 signature. 100 117 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pste4g02750 130 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 129 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pste4g02750 130 FunFam 40S ribosomal protein S15a 70 130 - -
Pste4g02750 130 Gene3D - 1 69 - -
Pste4g02750 130 Pfam Ribosomal protein S8 7 130 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pste4g02750 130 FunFam 40S ribosomal protein S15a 1 69 - -
Pste4g02750 130 SUPERFAMILY Ribosomal protein S8 4 130 IPR035987 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02750 Pste-Chr4 19417771 19419816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02750 1 130 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 97.692 1.74e-93 264