Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02746 GGAGGCACCATACTAATAGTATAGTTGAGCAGATAAGGTTGTGTTGATGGGCATGGCTGAAGCTTCAAGAATGACTTTGTACTCCACTCTGGTTCCCTGCTTCAGCCCCAAAGGCTATGTGGCTCACCGTCACTGTCACCACCCTGTGTCACGCAAACACCAAATTCACTGCTCAGTGTCCACTCAACAACAGAGCCCCCTGGCTTGGGGCTGTGAGATTGACTCTTTAGAGAACGCTTCAGCTTTGCAGAGATGGCTCTCAGAGTGTGGCCTTCCACCACAGAAGATGGGCATAGAGAGAGTAGACGTTGGAGAGAGAGGACTTGTTGCTTTGAAGAACATTAGGAAAGGGGAGAAGCTCCTCTTTGTGCCTCCCTCACTTGTTATCACTTCCAATTCTACACTTTCTTATGCATCTCTCTTGTGTGTGTATTCTGATTGCCAGGAGTGGAGCTGTTCTGAAGCTGGTGAAGTATTGAAAAGGAATTCAGTGCCAGATTGGCCTTTGCTTGCAACTTACCTCATAAGTGAAGCTAGCCTGCTGGGATCTTCTAGATGGAGCAATTATATATCAGCCTTACCTCGTCAACCTTACTCACTGCTTTACTGGACGCAAGCAGAACTAGATCGCTACTTGGAAGCTTCACAAATCAGGGAGAGAGCAATTGAACGGATCAATAATGTTATCGGAACATACAATGATTTGAGGCTCAGAATATTTTCCAAATACCCTGATTTATTCCCTGATGAGGTGTTCAACATAGAGTCCTTCAAATGGTCATTTGGTATTCTTTTCTCCCGCTTGGTGGAGACATTTTTGGATTATGATAAGACATCTAAGGGAATTGTCTTCACAACAGATCGACCCTATCAACCAGGTGAGCAGGTGTTTATTTCATATGGAACAAAGTCAAATGGGGAGCTTTTGTTATCTTACGGATTTGTTCCAAAGGAAGGTGCTAATCCTACTGATTCGGTTGAGTTGTCACTATCACTGAAGAAATCTGATGCATGCTACAACGAGAAGTTAGAACTGTTGAAGAAGTATGGATTATCAGCATCTCAATGTTTTCCAATACAGATTACTGGATGGCCATTGGAATTAATGGCTTATGCTTATTTATCTGTTAGTCCTTCAAGCATGAGAGGGAAATTTGAAGAGATGGCTGCTGCCGCATCTAATAATACCACCACCAAGAAGGATTTGAGATATCCTGAAATAGAGGAGCAAGCATTGCAATTCATACTAGATAGCTGTGAATCCAGCTTATCAAAATACAACAAAAGACTCTTTCTGAAACAGCTAGCTGTAGACTTGTGTACCAGTGAGCAAAGGATATTGTTTCGTGCTCAATATATACTGCGAAGAAAACTGAGGGACATGAGAGCTGGTGAATTAAGGGCCCTAAAATTATTCAATGGTTTCCAGAATCTTTTTCAATGAAGCAATTCACTGGTGCAATTGCTTTCTACCTGATTTACCTTTTATATCACCCTTGAGCTACCGTCAAACTTTGTGTTAATCGGTATCACTTGATTGAGGGAAACAGGTCCAGTCCTCACTGTTTGTTGATTAAATATTGAAAAACAAGAGAAGAAATAGAAAAGGGAAAATAATTGTAATATAGGCTATGTAATTGATCATAATATTTTTTTCTTTTTTTTTGTTTGAAATTTTCAATGTAAAATATCTGATTTGGTCTTTTTTTTAAAGTTTTC 1719 0.4049 MGMAEASRMTLYSTLVPCFSPKGYVAHRHCHHPVSRKHQIHCSVSTQQQSPLAWGCEIDSLENASALQRWLSECGLPPQKMGIERVDVGERGLVALKNIRKGEKLLFVPPSLVITSNSTLSYASLLCVYSDCQEWSCSEAGEVLKRNSVPDWPLLATYLISEASLLGSSRWSNYISALPRQPYSLLYWTQAELDRYLEASQIRERAIERINNVIGTYNDLRLRIFSKYPDLFPDEVFNIESFKWSFGILFSRLVETFLDYDKTSKGIVFTTDRPYQPGEQVFISYGTKSNGELLLSYGFVPKEGANPTDSVELSLSLKKSDACYNEKLELLKKYGLSASQCFPIQITGWPLELMAYAYLSVSPSSMRGKFEEMAAAASNNTTTKKDLRYPEIEEQALQFILDSCESSLSKYNKRLFLKQLAVDLCTSEQRILFRAQYILRRKLRDMRAGELRALKLFNGFQNLFQ 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02746 465 Pfam SET domain 91 286 IPR001214 GO:0005515
Pste4g02746 465 Pfam Rubisco LSMT substrate-binding 319 432 IPR015353 -
Pste4g02746 465 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 62 414 - -
Pste4g02746 465 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 316 462 IPR036464 -
Pste4g02746 465 Gene3D - 305 450 IPR036464 -
Pste4g02746 465 SUPERFAMILY SET domain 63 303 IPR046341 -
Pste4g02746 465 Gene3D set domain protein methyltransferase, domain 1 61 300 - -
Pste4g02746 465 ProSiteProfiles SET domain profile. 79 286 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02746 Pste-Chr4 19397141 19402929 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste4g02746 SET 8.4e-08 No_clan