Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02733 GAGAAAAGGAGCTGAGATCTTGGGTTGGCCGCGTTTCTCACAACTCCTATACTCTCATTCTATCACTTTCACTATTCCTCGCCTCAAATGCTTCTCCGCCATGCCTTCCCTTCTCCAATAAACAAAACAATTCATCTACAATGATGCTTCTGTGAATTCAGCTAATGGAAACAGCGCTCACTTGCTTCTTCTGCGGCAGAGTCCCGCCGAAACTGAAATTTGGGCCAAGTCACCCCTTCCCGTCTCGTAAGAATAACAATGCCTATACCAGTGTCTCCTTGTTGCCTTCATTTGGAACCCATCGGTTAATTGGAAAGGCGAGTACAAGTGAAACGAAGGTTGAGAGCGATGCCAAGAGCAGGAGAAGAAGGAGGAGAAGAAGTGACTCGGAGGGTATCGAACATGAGAATGGAGACCCTATTGGGAAGAAGGATCTCGGGAAGAGTGTGATGAGGTGGATTCGGGATAGCATGAGGGCCATGGCCAGTGATTTGGCTGCAGCGGAGTTGAAGGGAGAGTGGGAGTTGTGGGACCGGATGGGACCTGGTCTCACTTTCATTATGCTGGCTCAGCCCTATCTGAATGCGGTTCCTATGCCCATTGGCCTTGAGGGTATCTGCCTCAAGGCCTGCACTCACTATCCCACTCTCTTCGACCATTTTCAGAGGGAGCTTCGTCAAGTTCTTTGTCACCTTCAGAACAACTCCTTCATTCATGACTGGCGGGACACCAAGTCTTGGAAACTCCTCAAGAACCTCGCCAATTCAGCTCAGCATAGGGCAGTTGTGAGAAAGATAATGCAACCCAATAGTGTCCAAGGTGTTTTAGGAATGGACTTTGAAAAGGTCAAAGCAATACAGCACAGGATTGATGAATTTACCAACCACATGTCAGAACTACTCCGTATTGAAAGGGATGCTGAATTGGAGTTTACTCAAGAGGAATTGGATGCAGTTCCTAAACCAGATGATACTTCTGATTCTTCCAAACCAATTGATTTCTTGGTTAGCCATAGCCAGCCTCAACAAGAACTCTGCGACACCATTTGTAATTTAAACGCCATCAGTACCTCTATAGGACTGGGGGGAATGCATTTGGTGTTATTCAAGGTTGAAGGAAACCACCGGTTACCACCTACCTCTCTTTCACCTGGAGACATGGTTTGTGTGAGAACGTATGACAGCAAGGGTGTAATAACAACTTCTTGCATACAAGGATTTGTGAACAGTTTTGGGGATGATGGCTACAGTATTACTGTTGCTTTAGAGTCACGCCATGGTGATCCTACATTCTCTAAACTATTTGGGAAGAATCGCAACTGTGAAGCTTTAATGCTGCTTCAGAAGAATGGTTTACGAAAGAAGAATCCTTCAATTTCTGTTGTTGCTACACTATTTGGAGATAAGGAAGATGTTGCTTGGCTTGAGAAGAATCATTTGGCTGACTGGGCAGAAGAAAAATTGGATGGAATATTAGGAAGTGAAATCTTAGATGATTCTCAGCAGAGAGCAATTGCACTTGGTTTGAATAAAAAGAGGCCTGTATTGGTTATCCAAGGCCCTCCTGGTACTGGCAAGACTGGTTTGCTCAAGCAACTTATAGCTTGTGCTGTTCAGCGAGGTGAAAGGGTTCTGGTTACAGCACCTACTAATGCAGCTGTTGATAACATGGTTGAAAAGCTTTCAAATGTAGGATTAAATATTGTGAGGGTTGGAAACCCAGCTCGTATATCAAAAACAGTGGGATCAAAGTCTTTGGAAGAAATTGTAAATGCTAAGCTTGCAAGTTTTCGAGAAGAGTATGAAAGGAAGAAGTCAGATCTAAGAAAAGATCTAAGACATTGTTTAAGGGATGATTCATTAGCTGCAGGCATACGCCAACTTCTGAAGCAGTTGGGAAGGTCACTGAAGAAAAAGGAAAAGCAGATCGTGATTGAAGTTCTATCTAGTGCTCAGGTTGTGCTTGCCACTAATACTGGAGCGGCTGATCCTTTGATTCGAAGGCTAGATACCTTTGACTTGGTTGTCATAGATGAAGCTGGACAGGCAATTGAACCCTCTTGTTGGATTCCTATATTGCAGGGAAAGCGCTGTATTCTTGCTGGTGATCAATGCCAACTTGCTCCTGTCATATTATCTAGAAAGGCCTTAGAAGGTGGTCTAGGAATCTCTCTACTGGAAAGAGCTTCGACTTTGCATGAAGGGATTCTCACCACTAGATTAACAACACAATACCGTATGAACGATGCAATTGCTAGTTGGGCTTCAAAGGAGATGTACGGAGGATTATTGAAATCCTCTGAGACTGTTTTTTCTCATCTTCTTGTAGACACTCCCTTTGTTAAGCCTACTTGGATGACACAATGCCCACTGTTATTGCTAGATACTAGAATGCCATATGGAAGTCTATCAGTTGGTTGTGAAGAGCATCTAGACCCAGCTGGAACAGGCTCGTTTTATAATGAAGGAGAAGCTGAGATAGTTTTGCAGCATGTTTTCTCCTTAATTTATGCTGGTGTAAACCCAACTGCTATTGCAGTGCAATCCCCTTATGTTGCCCAAGTACAACTTTTGAGGGACAAGCTTGATGAATTTCCAGAAGCAGCGGGTACTGAGGTTGCAACCATTGACAGTTTTCAAGGTCGGGAAGCCGATGCAGTAATTATATCCATGGTACGATCAAACACATTGGGAGCTGTTGGATTCCTTGGGGATAGCAGAAGAATCAATGTTGCCATCACAAGAGCACGCAAACATTTAGCTTTGGTCTGTGACAGCTCAACTATATGCCACAATACTTTCTTAGCAAGACTTCTGCGCCATATTAGACACTTTGGTAGGGTGAAGCATGCAGAACCAGGTAGTTTTGGAGGATACGGACTTGGGATGAATCCAATATTACCTTCCATTAATTAGTGTGCAACAGTAGCATGAAACAAATTTAAAATTACCTATGGGGATTTTTTGGGGAAAAAGGGTAGAGATGGATAGGTTTTTTCTTTCATGTGGTTAAAATTTGTATAGTTGTATAGCAATTCATAAATTCTAAATTGTGTAGCATGCCAAACACCATTCATGCATGAAAAGTTCATTGAAACCCAAAATTGGAATGACATTTATAGCGTGTTTATTTTTATCAGGTG 3142 0.4306 METALTCFFCGRVPPKLKFGPSHPFPSRKNNNAYTSVSLLPSFGTHRLIGKASTSETKVESDAKSRRRRRRRSDSEGIEHENGDPIGKKDLGKSVMRWIRDSMRAMASDLAAAELKGEWELWDRMGPGLTFIMLAQPYLNAVPMPIGLEGICLKACTHYPTLFDHFQRELRQVLCHLQNNSFIHDWRDTKSWKLLKNLANSAQHRAVVRKIMQPNSVQGVLGMDFEKVKAIQHRIDEFTNHMSELLRIERDAELEFTQEELDAVPKPDDTSDSSKPIDFLVSHSQPQQELCDTICNLNAISTSIGLGGMHLVLFKVEGNHRLPPTSLSPGDMVCVRTYDSKGVITTSCIQGFVNSFGDDGYSITVALESRHGDPTFSKLFGKNRNCEALMLLQKNGLRKKNPSISVVATLFGDKEDVAWLEKNHLADWAEEKLDGILGSEILDDSQQRAIALGLNKKRPVLVIQGPPGTGKTGLLKQLIACAVQRGERVLVTAPTNAAVDNMVEKLSNVGLNIVRVGNPARISKTVGSKSLEEIVNAKLASFREEYERKKSDLRKDLRHCLRDDSLAAGIRQLLKQLGRSLKKKEKQIVIEVLSSAQVVLATNTGAADPLIRRLDTFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKALEGGLGISLLERASTLHEGILTTRLTTQYRMNDAIASWASKEMYGGLLKSSETVFSHLLVDTPFVKPTWMTQCPLLLLDTRMPYGSLSVGCEEHLDPAGTGSFYNEGEAEIVLQHVFSLIYAGVNPTAIAVQSPYVAQVQLLRDKLDEFPEAAGTEVATIDSFQGREADAVIISMVRSNTLGAVGFLGDSRRINVAITRARKHLALVCDSSTICHNTFLARLLRHIRHFGRVKHAEPGSFGGYGLGMNPILPSIN 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02733 916 FunFam DNA helicase A 690 898 - -
Pste4g02733 916 Pfam AAA domain 668 871 IPR041679 -
Pste4g02733 916 Gene3D - 690 898 IPR027417 -
Pste4g02733 916 SMART AAA_5 457 672 IPR003593 GO:0016887
Pste4g02733 916 CDD DEXXQc_SMUBP2 442 691 - -
Pste4g02733 916 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 115 899 - -
Pste4g02733 916 MobiDBLite consensus disorder prediction 57 89 - -
Pste4g02733 916 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 442 878 IPR027417 -
Pste4g02733 916 Gene3D - 261 379 - -
Pste4g02733 916 Pfam AAA domain 442 658 IPR041677 GO:0004386
Pste4g02733 916 Gene3D - 242 674 IPR027417 -
Pste4g02733 916 Coils Coil 543 563 - -
Pste4g02733 916 MobiDBLite consensus disorder prediction 51 89 - -
Pste4g02733 916 CDD SF1_C_Upf1 692 888 IPR047187 -
Pste4g02733 916 SMART ultradead3 438 690 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02733 Pste-Chr4 19317471 19333255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02733 436 631 Core DNA Replication Machinery Family AT1G08840 26.768 3.10e-08 55.8