Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02725 TTTCCAGAGTTTTAGCCGAAAAAGGTCAAGGAAAATGGCTGGTTTTTGGAGCGTGTTTTGTGGGGAATGTGGTTGTTCAGAGGCTGTAAGAATGCCTTGCAGTTATGATTTTAGACTTTTCATTGATCCTTCCACTTGTGTCAATCATTTGTTGATCTCTTGCTCTGATATATTGCTGCTTATCATTCTTGTATTCACTATGATCAAGAAGTCAATATTAAAACCATCTCAGGGTGTAACAAAGGTGCAAAGATATTCATATTTTCAGCTTGTTTCTGCCATAGCCAATGGTGCTCTTGGCTTGGTACATTTGTGCTTTGGTATTTGGCTTTTAATGAAAAGGTTGAGTTTAACACAAGCTGTGTTGCCTCTTGATTGGTGGTTCATAGAAATCTTTCATGGATTAACATGGTTGTTAGTGAGTTTGGTATTAAGTTTCAAGTCGCAACAACTTCAAAGAGCATGGACAAGGCCTTTTTCTATTCTAGTCTTCTTGGTTTCTGGTATTTTCTGTGCTTCATCCTTGTGCTATGCAATTAGTCGCAGAAAACTATCCCTTAAGATAGTTTCAGATATTCAATCTTTTCTGGGGGCGATATTATTGTTATTATGTACATATGAGGAATCCAAGCATAGGGACACTGACAGAGAAACTGATGAAAGTCTTTATGCCCCCTTAAACGGTGAGTCCAACAAAAATGATTCTATTAGATATGTAACCCCATTTGCCGAAACTGGATTCTGCAGCAAAATGTCATTTTGGTGGTTGAATCCATTGATGAAAAAAGGCAAGGAGAAACCACTCCAGGATGAAGACATTCCAAGGATGGGGGAGGAGGATCAAGCAGAAAGTTGTTATTTTATGTTTCTGGACCAATTGAACAGACAGAAACAAAAGGATCCATCCTCCCAGCCATCAGTTTTAAGGACAATAATTTTATGCCATTGGAGAGAAATTTTTATATCAGGATTCTTTGCATTCCTTAAGGTGCTTGCTCTGTCTTGCGGACCTCTTCTTCTGAATTCTTTTATTTTGGTTGCTCAGGGTCACCAGAGTTACAGATATGAAGGTTTTGTGTTGGCCATATCACTTTTCTTTGCGAAAATCATAGAATCCCTATCACAAAGACAATGGTACTTCCGCTGTAAACTTATTGGTGTGAAAGTTAGGTCGTTGCTAACTGCAGCCATTTATAAAAAGCAATTGAGGTTATCCAATTCTAGTAGATTGATACACTCTGGTGGTGAGATAATGAATTATATGACTGTAGATGCGTATAGAATTGGTGAGTTTCCCTACTGGTCTCATCAGACTTGGACAACTAGCTTACAGCTGTGTTTCTCATTAGTAATACTTTTTCGTGCTGTTGGGCTGGCAACAATTGTCTCCTTGGTGGTGATACTGATCACTGTGCTTTGCAATACTCCGATTGCTAAGTTAGAGCACAAGTTACGAAGCAAACTTATGGTGACACAAGATGAGAGATTGAAGGCTTGTTGCGAGGCTCTTGTGAATATGAAGGTGTTGAAGTTATATGCATGGGAAATCAGTTTTAGAGCTGCTATAGAGAAATTAAGGAATGTGGAGCTCAAGTGGTTGTCTTCTGTGCAATTAGCAAATGCTTACAACAACCTTCTCTTTTGGTCATCCCCTTTTTTGGTCTCTGCTACTTCCTTTGGGGCATGTTACTTTCTTAATGTTACTTTACATGCAAATAATGTTTTCACCTTTGTGGCAACTTTGCGTCTTGTTCAAGATCCTATTAGAGTCATCCCAGATGTTATTGGAGCCGTAATTCAGGCAAAAGTGTCGTTTTCTCGGATTATAAAATTCCTGGAGGCTCCTGAGCTCGAGAGAATATATGATACGAAAAGTTGTCACAATGACAAGACGAGGGGCTCAATTTTAATAAGATCTGCTGACTTTTCCTGGGAAGATAATGTAACTAAGCCAACTCTGAGAAACATAAATTTAGAGGTTGGGCCAGGGCAAAAGGTGGCTATCTGTGGAGAGGTTGGCTCGGGAAAATCAACTCTCTTAGCTGCAATTCTCAGAGAAGTTCCTAATACTCAAGGGACAATTGAAGTTTATGGAAAGTTTGCTTATGTTTCTCAAATAGCATGGATACAATCAGGTACAATTCGGGAAAATATATTGTTTGGAGCAAGCATGGATGATGAAAAATATCAAGAAACTCTTCATAGGTCTTCACTATTAAAGGACCTTGAGTTGTTTCCCCATGGTGATCTCACTGAAATAGGGGAGAGAGGAATCAACCTGAGTGGAGGTCAAAAGCAGCGAATTCAACTAGCACGAGCTCTATATCAGAATGCTGATATATACCTCTTGGATGATCCATTCAGTGCTGTTGATGCACATACTGCAACAAATTTGTTCAACGAATACATAATGGAAGGACTTGCGGGGAAAACAGTATTGCTCGTCACTCATCAAGTTGAATTCCTTCCAGCATTTGATTCCATTGTGGTTGTTATCTTCTGCTTGCTGAAAATTTGCATGGTTGTAATTATTTCTGTTTTAAAGTTGATGTCCGATGGGGAAATCAAAGAAGCCGCTTCTTATCACTTTATGTTGATCACAAGCCAAGAATTTCAGGATCTTGTGAATGCCCACAAAGAGACTGCTGGTTCTCACCGGCTTGTGGATGTTACTTCTTCCCAGAAACATTCAAATAGTGCTAGAGAAATTAGAATAGCTTATAAGGAGCAACATTATGGAGCATCCAAAGGTGATCAATTGATTAAGCAAGAAGAGAGAGAAAAAGGAGACCAAGGGTTCAAACCATATATACAGTATCTGAATCAGAACAAAGGATATATATACTTCTCTGTGGCTGCTCTTTCTCATTTAACATTTGTTGTTGGCCAAATATTGCAAAACTTATGGATGGCAGCTAATGTTGACAATCCTCAAGTCAGCACTTTCGAATTGATTCTAGTTTACTTGTTGATTGGAGTTATTTCAACAATATTTGTGTCCATGAGAATTTTGGCTACAGTGGCTTTGGGTCTTCAATCATCAAAATCTTTATATTTAGAGTTATTGAATTCGCTTTTTCGTGCCCCTATATCATTTTATGACTCCACTCCTTTAGGACGGATACTTAGTAGGGTCTCTATAGATCTCAACATTGTGGACCTTGATATCCCATTTTCCCTTATTTTTTCTGTGTCAGCAGCTATGACATGTTTAGGTAATCTTACCGTTTTAGCCGTTATTACTTGGCAAGTCCTGTTTGTCTCCATACCAGCGATTTATTTTGTAATCTGCTTGCAGAGATATTACTTTGCCTCGGCAAAAGAACTAATGCGGATGAATGGCATCACAAAATCCATTTTAGCCAGCCATCTTGCCGAATCTGTTGCTGGAGCAGTCACAATAAGGGCTTTTAACGAGGAAGATCGTTTCTTTGAGAAAAGTCTTGATCTTATTGATGTCAATGCTAGCCCTTACTTCCATAATTTTGCAGCAAATGAATGGTTAATTCAACGGTTAGAAACATTAAGTGCAGTTGTACTTACATCTGCGGCACTTTGCATGGTTGTACTTCCACCTGGAACTTTCACCTCTGGTGAGACGTTTGCTATTATTGCTTTTGAAAAAAATGTCACTTCAGAGTTGGTTTACTGCAAATCACGTTTTGTTTTTTCAACTCAGGCTAATACAAGAATTATAATTTCAACATATGATGTCGTTCCAGGATTTATCGGCCTGGGTCTCTCTTTTGGCCTTTCACTTAACATGAGCTTGGTGTTTGCTATTCAAAATCAATGCAATATAGCAAATTATATAATATCAGTGGAGAGGCTAAGCCAGTATATGCATATCCCAAGTGAGGCCCCTGAAATAATAGAGGGAAATCGTCCACCTACTAATTGGCCAGTTCAGGGAAAAGTAGAATTACATGATTTGAAGGTAAGGTATCGGCCTGATGCTCCGCTTGTGCTACAGGGGATCACATGCACATTTGAAGGAGGGCAAAAGATTGGTGTTGTTGGCAGAACAGGCAGTGGAAAGTCCACACTTATAGGTGCCTTATTCCGTCTAGTGGAGCCAGCAGGTGGAAAAATAATAATTGATGGCATAAACATATGTTCTATTGGACTTCATGATTTGAGGTCACGTATGGGTATAATACCTCAGGATCCTACTCTTTTTAATGGGACAGTCAGATACAATTTGGATCCCTTATCTCAACACTCCTACCAGGAGATATGGGAGGTTCTTGGGAAGTGTCAATTGCAAGAGGTTGTCCAAGAGAAAGAAGAGGGATTAGACTCTTCAGTTGCTGAAGCTGGATCTAACTGGAGCATGGGACAAAGACAACTACTCTGTTTGGGGCGTGCTCTTCTCAGGAGAAGTCGGATATTGGTGCTTGATGAAGCAACTGCATCCATTGATAATGCAACTGATTTGATTTTGCAGAAAACTATTAGAACTGAGTTTGCAGATTGTACAGTGGTCACAGTAGCTCACAGGATACCAACTGTGATGGATAGCACCAAGGTTCTTGCCATCAGTGATGGAAAACTGATGGAATTTGATGAACCAATGAACTTGATGAATAGAGAAGGATCATTGTTTGGGAAGCTTGTGAAGGAGTACTTGTCTCATTTTCAGTCTGCGGAATCTCGTTGA 4660 0.3942 MAGFWSVFCGECGCSEAVRMPCSYDFRLFIDPSTCVNHLLISCSDILLLIILVFTMIKKSILKPSQGVTKVQRYSYFQLVSAIANGALGLVHLCFGIWLLMKRLSLTQAVLPLDWWFIEIFHGLTWLLVSLVLSFKSQQLQRAWTRPFSILVFLVSGIFCASSLCYAISRRKLSLKIVSDIQSFLGAILLLLCTYEESKHRDTDRETDESLYAPLNGESNKNDSIRYVTPFAETGFCSKMSFWWLNPLMKKGKEKPLQDEDIPRMGEEDQAESCYFMFLDQLNRQKQKDPSSQPSVLRTIILCHWREIFISGFFAFLKVLALSCGPLLLNSFILVAQGHQSYRYEGFVLAISLFFAKIIESLSQRQWYFRCKLIGVKVRSLLTAAIYKKQLRLSNSSRLIHSGGEIMNYMTVDAYRIGEFPYWSHQTWTTSLQLCFSLVILFRAVGLATIVSLVVILITVLCNTPIAKLEHKLRSKLMVTQDERLKACCEALVNMKVLKLYAWEISFRAAIEKLRNVELKWLSSVQLANAYNNLLFWSSPFLVSATSFGACYFLNVTLHANNVFTFVATLRLVQDPIRVIPDVIGAVIQAKVSFSRIIKFLEAPELERIYDTKSCHNDKTRGSILIRSADFSWEDNVTKPTLRNINLEVGPGQKVAICGEVGSGKSTLLAAILREVPNTQGTIEVYGKFAYVSQIAWIQSGTIRENILFGASMDDEKYQETLHRSSLLKDLELFPHGDLTEIGERGINLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAHTATNLFNEYIMEGLAGKTVLLVTHQVEFLPAFDSIVVVIFCLLKICMVVIISVLKLMSDGEIKEAASYHFMLITSQEFQDLVNAHKETAGSHRLVDVTSSQKHSNSAREIRIAYKEQHYGASKGDQLIKQEEREKGDQGFKPYIQYLNQNKGYIYFSVAALSHLTFVVGQILQNLWMAANVDNPQVSTFELILVYLLIGVISTIFVSMRILATVALGLQSSKSLYLELLNSLFRAPISFYDSTPLGRILSRVSIDLNIVDLDIPFSLIFSVSAAMTCLGNLTVLAVITWQVLFVSIPAIYFVICLQRYYFASAKELMRMNGITKSILASHLAESVAGAVTIRAFNEEDRFFEKSLDLIDVNASPYFHNFAANEWLIQRLETLSAVVLTSAALCMVVLPPGTFTSGETFAIIAFEKNVTSELVYCKSRFVFSTQANTRIIISTYDVVPGFIGLGLSFGLSLNMSLVFAIQNQCNIANYIISVERLSQYMHIPSEAPEIIEGNRPPTNWPVQGKVELHDLKVRYRPDAPLVLQGITCTFEGGQKIGVVGRTGSGKSTLIGALFRLVEPAGGKIIIDGINICSIGLHDLRSRMGIIPQDPTLFNGTVRYNLDPLSQHSYQEIWEVLGKCQLQEVVQEKEEGLDSSVAEAGSNWSMGQRQLLCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVVTVAHRIPTVMDSTKVLAISDGKLMEFDEPMNLMNREGSLFGKLVKEYLSHFQSAESR 1541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02725 1541 ProSitePatterns ABC transporters family signature. 749 763 IPR017871 GO:0005524|GO:0016887
Pste4g02725 1541 Pfam ABC transporter transmembrane region 308 574 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g02725 1541 Pfam ABC transporter transmembrane region 937 1195 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g02725 1541 Gene3D - 619 872 IPR027417 -
Pste4g02725 1541 SUPERFAMILY ABC transporter transmembrane region 936 1275 IPR036640 GO:0005524|GO:0016020
Pste4g02725 1541 CDD ABC_6TM_ABCC_D2 934 1270 IPR044726 GO:0140359
Pste4g02725 1541 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 232 1530 - -
Pste4g02725 1541 FunFam ABC transporter C family member 10 292 605 - -
Pste4g02725 1541 CDD ABCC_MRP_domain1 624 819 - -
Pste4g02725 1541 Gene3D ABC transporter type 1, transmembrane domain 280 606 IPR036640 GO:0005524|GO:0016020
Pste4g02725 1541 FunFam Multidrug resistance-associated protein 4 610 882 - -
Pste4g02725 1541 CDD ABC_6TM_ABCC_D1 310 597 IPR044746 GO:0140359
Pste4g02725 1541 Pfam ABC transporter 642 776 IPR003439 GO:0005524
Pste4g02725 1541 Gene3D ABC transporter type 1, transmembrane domain 901 1276 IPR036640 GO:0005524|GO:0016020
Pste4g02725 1541 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 820 IPR027417 -
Pste4g02725 1541 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 946 1179 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g02725 1541 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 626 866 IPR003439 GO:0005524
Pste4g02725 1541 CDD ABCC_MRP_domain2 1293 1513 - -
Pste4g02725 1541 SMART AAA_5 1321 1506 IPR003593 GO:0016887
Pste4g02725 1541 SMART AAA_5 651 824 IPR003593 GO:0016887
Pste4g02725 1541 FunFam ABC transporter C family member 3 1278 1530 - -
Pste4g02725 1541 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 589 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g02725 1541 Pfam ABC transporter 1312 1460 IPR003439 GO:0005524
Pste4g02725 1541 SUPERFAMILY ABC transporter transmembrane region 297 602 IPR036640 GO:0005524|GO:0016020
Pste4g02725 1541 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1285 1522 IPR027417 -
Pste4g02725 1541 Gene3D - 1279 1530 IPR027417 -
Pste4g02725 1541 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1295 1529 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02725 Pste-Chr4 19283000 19289717 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02725 618 854 Calmodulin-binding Proteins AT2G36910 28.854 2.58e-22 102