Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02719 ATGGATCGTTTTTTTCCCGAGAAACTTCTGGGTGAGATTTTCTGGGATGATCAAGCTTTTCCTCCTGCTACTCAAAGTGCTTTTGTTCAATATAGAGACCTACCCAGAACGAGTAATTCTCAAAACGTCAATATGAGTAAGAGAATGCTTGAGTTCTTGAGAAAAAGTTGGCCTGTGGAGAGAACCAACAATGAAAGAGATCGAGGTTTCAGGCACATGATTAATGAAAGAATGAGGAGACAGAGGCAGAGGCACTGTTGCCTCGCCCTGCATTCAATCTTACCACATGGAACCAAAACGGATAATAATTCTGTAATTCAAATGGCCGCAAAGGAGATTGTGCGGCTACAAGGACGCAGAGAAGAGTTGCAAAGTAAAGCAGATCTTGAAAGTGGAAGGACCAATGTGCAATATTTAAGAGTTTCACATCCCAACTCTGGAATTGATTCTATGGTTGACATTCTAAAATGCTTGAAAAACAAAGGAGTGGATACCACACGAATCAGATCAACTTTCTCCCCACACGACTTGTTTGCTGTCTTCGACATGCAAACTCATAACCTCTAACTTTGTGTCTCAACTTGGATTCTCTAGTGCCAACTTCACAACAGTATCAGTAATATAGTTTTTAGGAAAAAAACCTACATCATATTTTTGTTAGATAATCTTTTTATTAATTAGACAAAGTTTTAAACTTTTTTATCATCCATTTCCATTTATTGGTTATCAATTTGTCCAAGCAGTAATAAAAGATACTATTGTAAGATTTTACTGATGGTGATGTGGAAAGGGGCAGTTGGAGAAAAGATGATGAAGATGAATTTGATTGGAAGCTTCACTCCAAAGGCCGGGAAGGTTCAAATAAGAAGCAAAAGACTCTAAGCATGAACCATAAAATGATAGGCTTTGTACACGTGCCTTGTTTATATATGGTGATCAGGCTAGTACATGCATAGAATTAGTCAGCTCTAATAATGAAGTGTATTCAGTCCTGAAATGAAGATTCCTATTTTTCCCTCGGCGACCAACAAGACCCTTCCCCAAAACAGGAAGTCATAGAATCAAAATTATGAATTTTTGTTTGGTCGAGGAAGTAGAAATTAAAGCATCTTGCATTCTAACTACTTTCATGCTATCAACCATCGTATCCTCGCATAACACCTCTTAGCAAAAAGTTCCTACCTCATATGAAAAAATTCAAACTTTGCAAAATTCAATAATGAGAGATTGAAGGAAAAAGAAGAAGAAGAAGAATAGGAATGAGAGATTGATAGCAGTGGAATGAATGAATGGAAGAAACAAAGCCGAGCTTTGGAAACGGCAAATTAGAAGGGTCTCTTATCTTTCCACAAACAAGGGCTCAAGCTAT 1369 0.3755 MDRFFPEKLLGEIFWDDQAFPPATQSAFVQYRDLPRTSNSQNVNMSKRMLEFLRKSWPVERTNNERDRGFRHMINERMRRQRQRHCCLALHSILPHGTKTDNNSVIQMAAKEIVRLQGRREELQSKADLESGRTNVQYLRVSHPNSGIDSMVDILKCLKNKGVDTTRIRSTFSPHDLFAVFDMQTHNL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02719 188 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 116 IPR011598 GO:0046983
Pste4g02719 188 Gene3D - 59 131 IPR036638 GO:0046983
Pste4g02719 188 Coils Coil 106 126 - -
Pste4g02719 188 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 21 186 IPR044658 -
Pste4g02719 188 Pfam Helix-loop-helix DNA-binding domain 71 117 IPR011598 GO:0046983
Pste4g02719 188 SMART finulus 73 122 IPR011598 GO:0046983
Pste4g02719 188 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 67 144 IPR036638 GO:0046983
Pste4g02719 188 CDD bHLH_AtbHLH_like 72 124 IPR045239 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02719 14 186 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 34.653 8.68e-30 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02719 4 19245627 19247063 Pste4g02719 4 19245627 19247063 ECH