Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02715 ATGAGAAGCAGCAAAGGGCATAGCTTATTTGGGGTGTTGGTGTTGGTGTTGGTGTTGGTGTTGGTGAGGTGCTGCAATGGTCAAACCGCTAGACAAGAGAACAACACGGGGTACACGTGCAGGGGAAGAAGCACGTGCGAAGCGTACGCCTTCTACAGGGCGGCGAGTCCGAACCTGCTGGACCTGGGAGCGATAGGGGACCTGTTCGAGGTGAGTCGGCGCATGATAGCAAGGCCGAGCAACATCTCAAACCCTTCGACGGCCTTAGTACCAGATCAACCCCTCTTGGTTCCCTTAACGTGTTCCTGCAACCCGGTTAACGCCTCCTTGGGGTCCCTCTCCTACGCCAACATCTCCTACACCATCAAATCCGGCGACACCTTTTTCTTAGTCTCCACCATCGCTTTCCAGAACCTCACCACTTACCCCTCCGTCCAGGCTGTCAACCCCACCCTCGTCCCCACCAAGCTCTCCATCGGCCAAGACCTCATCTTCCCCATCTTCTGCAAATGCCCCGACAACACCACTGCTCCTACCCCTACCAATACCAATTACAGTTACATCATCTCTTACGTTGTCCAACCCTCCGACACCCTATCCTCCATCGCTTCAACCTTCGCCGCCGACCAACAGGCCATCATCCACTTCAACGGTGACACTCTTCATCTCTATGACACCATTTTCATTCCTGTCACCCGATTGCCGTCTCTTTCGCAGCCTGCGCTCGCTCCCTCAGCTCCGCCTCCTGGGAACGGAACCACGCTCAGCGGCAACGATAACCATACCGATAGGACGGGCACGGTCAGAGGATTGGGGATTGGGTTGGGGATTGTGGGGTTGCTGTTGATTTTGGTGAGTGGCTTTTTGGTCTCTAGGATTCGGGAGGCTGCGAGGTTGAGAGTGGAGAGGGATGAAGAGGAGGGTGGACAACGGAAGCAGGTGTTTTCGGAACGGAAAGCTTTGGATCTCAACTTGATGGCCAATGTGTCTGATTGTTTGGATAAGTATAGGGTTTTCGCCATTGATGAACTTTTGGAAGCCACCCACGGGTTTCATCACACTTCCTCCATTCAAGGCTCCGTCTATAAAGGTCTCATTGATGGACACCTCTTTGCCATCAAGAAGATGCACTGGAATGCCTATGAGGAACTCAAGATCTTGCAGAAGGTAAACCATGGGAATCTGGTGAAGTTGGAGGGATTTTGCATCGACCCAGAAGAAGCAAATTGCTATCTGGTCTATGAATACGTGGAGAATGGATCTCTGTACTCATGGCTGCATGAGGACAAAAACGAAAAGCTGAACTGGAAAACAAGGCTGCGAATAGCCATTGACATTGCCAATGGCCTCCAATACATCCACGAGCACACAAGGCCACGAGTTGTCCACAAAGACATCAAGAGCAGCAACATTCTCTTGGACTCTAACATGAGAGCCAAAATTGCCAATTTTGGCCTTGCAAAGTCGGGAATCAATGCCATTACCATGCACATTGTGGGAACACAGGGCTATATAGCCCCTGAATATCTGGCTGATGGTGTGGTCTCCACAAAGATGGATGTCTTCTCTTTTGGGGTTGTGTTGCTTGAACTAATATCTGGGAAAGAGGCCATTGATGAGGAGGGAAATCTGTTGTGGGCAAGTGCCATCAAAACCTTTGATGTGGACAATGAACAAGAGAAGACTACGAGACTGAAGGAATGGTTGGATAAGGATATTTTAAGGGAAACATGCTCAATGGAAAGTTTGGTGGGTGTTCTCACCATTGCAATTGCTTGCTTGCATAGAGACCAGAGAAAGAGGCCCAGCATAATGGATATTGTCTATGCATTAAACAAAAGTGAGGAAATGGGTTTTGAAATCTCAGATGATGGGTTTGGTTCCCCACGGTTTTCAGCCATGTGGACACTTCGTCGAGCTTCTCTTCGTCTCAGTAAGAGCCAAGGACTTGGACTTAATGTGGGAGCTACCCGTGTTTCTTGTGTCAAATTAGTGCCACCCGTTTGTGTGCAAAGCGAGGCTGGTATCACTCAGTCTCGTGAAATTACATCTGGTAGATTTCTGACCGCTGATGCATTTTGCGGTACGGGTTGTGCTTCCGTGAAATTTGCTTCGGGCAGTCGTCAACTTTCTTCGCAAGCTGGTGCTAGCAGCTCAAAAGAGAATGATGATGATGATCTGGAGGCTGGGTTGTCTGAGCTGGATATGCACGGGAGTAATGATGAATCTGATGCAGACCTGTCTCATAGTGATGAGGATGGTGGAAAACCTCATCATGATCTGGAGTTATCAGATGCCGAGATTGATCCAACAAAGAAAAAATCACAGGGCAGGTGGACTCAGTCAGAACTATTCAAGGCAATTTTACAAGCTCCTGGTTTGTCAGTTGATTCTGCTCTTGATAAGTGGGCTGAACAGGGGAAAGAACTAAATCGGAAGGAGATCTCATCCTCTCTGCGTAATCTTCGGCAGCGTAAAATGTATGGAAGGGCTTTGCAGCTCTTTCAGTGGTTAGAGTCAAACAAGAAGCTTGAATTTCTGGAGAGTGATTATGCTTCTCAACTTGATTTGATTGCCAAGTTGCGTGGCCCCCCAAAGGCTGAGAAATACATTGAGAGTGTTCCAGAATCTTTTAGAGGTGAGCTATTATACCGAACGTTACTGGCTAACTATGTTAGTCTGAACAATCTTACGGCAGCTGAGAAAATATTCAACAAAATGAAGGACTTGGATTTACCACTTACGACATTTGCTTGTAACCAGTTGCTGCTTTTGTATAAGAAGATTGACAAGAAGAAAATAGCTGATGTGTTACTGCTTATGGAAAAAGAGAATGTCAAACCTTCTATTTTTACTTATAGAATCCTAATAGACTCGAAGGGCCAGTCCAATGATATTGCTGGAATGGAGCAAGTTTTTGAGACAATGAAGGCAGAAGGCATTGAACCAGATTTCAACGTACATGCACTCTTGGCTAGGCATTACATCTCAGCTGGGCTTAAGGAAAAAGCTGAAGCTATATTGAAGGATATTGAAGGTGAAAACTTGGAAGAGAATTCATGGGTATGCTCAACTTTGATCCGCCTTTATGCAAACCTGGGAAAGGGTGATGAAGTGGAGAGGATCTGGAAGTACTGTGAATCAACAAAGATTCGGTTGGATGACTGCTTGGGTGCAATTGAAGCTTGGGGAAAGTTAAAGGAAATTGAAAAAGCAGAGGCAGTTTTTGAGATGGCGTCAAAGAGATATAAGTTGAATGCCAAGAACTACTCAGTTCTTCTGAAGGTGTATGCAAATAATAAGATGCTAAATAAGGGTAAGGATCTTGTTAAGCGGATGGCAGATAATGGGTTGGAAATAGGCCCATTGACCTGGGATGCACTTGTGAAACTGTATATCCAAGCAGGGGAAGTCGAGAAGGCAGACTCTGTTCTGCAAAAGGCAGTGCAAAAGAATCGTTTACAGCCAATGTTTTCCACCTTTATGGCTATTTTGGATCAGTATGCAAAGAGGGGTGACGTCCATAACTCGGAGAAGATTTTCCTTCGAATGAGACAAGCTGGTTATACTAATCGAATCAGTCAGTTCCAAACTCTAATACAGGCATATATAAACGCTAAGGTTCCAGCATACGGGATCAGAGAGAGGATGAAAGCTGATAACCTATTTCCCAACAGAAATTTGGCTAACCAGTTGGCTCTAGTCGATGCATTTAGGACAACTGCAGTTTCCGATTTGCTTGATTGAGGTGTTCTGTAAGGGTTGTTTCTACTCTTTCCATGCAACTCTTATTAGGTAGTTGAATTATAGATGGCACATTCCATGTTTGAATGCTGTCTTGTACTGCTGTGAGTGCTATCTATTAAGCTTAGTTGGATACCTATAAGAGCTTATATTAATGCTCAAATACTGCGTTTATGATTTTAGAACGTCCACTTGTTTTACATTGGTTGTAATGCTTTGATATATGGTGACTTGGTTAGGCTTTACTATTGACACCTAAATTGTTACTCCCTCATTTCTCTGTTGATA 4032 0.4563 MRSSKGHSLFGVLVLVLVLVLVRCCNGQTARQENNTGYTCRGRSTCEAYAFYRAASPNLLDLGAIGDLFEVSRRMIARPSNISNPSTALVPDQPLLVPLTCSCNPVNASLGSLSYANISYTIKSGDTFFLVSTIAFQNLTTYPSVQAVNPTLVPTKLSIGQDLIFPIFCKCPDNTTAPTPTNTNYSYIISYVVQPSDTLSSIASTFAADQQAIIHFNGDTLHLYDTIFIPVTRLPSLSQPALAPSAPPPGNGTTLSGNDNHTDRTGTVRGLGIGLGIVGLLLILVSGFLVSRIREAARLRVERDEEEGGQRKQVFSERKALDLNLMANVSDCLDKYRVFAIDELLEATHGFHHTSSIQGSVYKGLIDGHLFAIKKMHWNAYEELKILQKVNHGNLVKLEGFCIDPEEANCYLVYEYVENGSLYSWLHEDKNEKLNWKTRLRIAIDIANGLQYIHEHTRPRVVHKDIKSSNILLDSNMRAKIANFGLAKSGINAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGNLLWASAIKTFDVDNEQEKTTRLKEWLDKDILRETCSMESLVGVLTIAIACLHRDQRKRPSIMDIVYALNKSEEMGFEISDDGFGSPRFSAMWTLRRASLRLSKSQGLGLNVGATRVSCVKLVPPVCVQSEAGITQSREITSGRFLTADAFCGTGCASVKFASGSRQLSSQAGASSSKENDDDDLEAGLSELDMHGSNDESDADLSHSDEDGGKPHHDLELSDAEIDPTKKKSQGRWTQSELFKAILQAPGLSVDSALDKWAEQGKELNRKEISSSLRNLRQRKMYGRALQLFQWLESNKKLEFLESDYASQLDLIAKLRGPPKAEKYIESVPESFRGELLYRTLLANYVSLNNLTAAEKIFNKMKDLDLPLTTFACNQLLLLYKKIDKKKIADVLLLMEKENVKPSIFTYRILIDSKGQSNDIAGMEQVFETMKAEGIEPDFNVHALLARHYISAGLKEKAEAILKDIEGENLEENSWVCSTLIRLYANLGKGDEVERIWKYCESTKIRLDDCLGAIEAWGKLKEIEKAEAVFEMASKRYKLNAKNYSVLLKVYANNKMLNKGKDLVKRMADNGLEIGPLTWDALVKLYIQAGEVEKADSVLQKAVQKNRLQPMFSTFMAILDQYAKRGDVHNSEKIFLRMRQAGYTNRISQFQTLIQAYINAKVPAYGIRERMKADNLFPNRNLANQLALVDAFRTTAVSDLLD 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02715 1248 FunFam Pentatricopeptide repeat-containing protein, mitochondrial 1057 1242 - -
Pste4g02715 1248 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 25 613 - -
Pste4g02715 1248 MobiDBLite consensus disorder prediction 731 776 - -
Pste4g02715 1248 FunFam Pentatricopeptide repeat-containing protein, mitochondrial 880 1056 - -
Pste4g02715 1248 MobiDBLite consensus disorder prediction 239 263 - -
Pste4g02715 1248 Gene3D LysM domain 188 230 IPR036779 -
Pste4g02715 1248 ProSiteProfiles Protein kinase domain profile. 315 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02715 1248 Gene3D Transferase(Phosphotransferase) domain 1 417 623 - -
Pste4g02715 1248 CDD LysM 189 229 IPR018392 -
Pste4g02715 1248 Pfam Protein kinase domain 372 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02715 1248 Gene3D LysM domain 118 166 IPR036779 -
Pste4g02715 1248 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 949 983 IPR002885 -
Pste4g02715 1248 SUPERFAMILY Protein kinase-like (PK-like) 343 611 IPR011009 -
Pste4g02715 1248 Pfam Pentatricopeptide repeat domain 902 958 IPR002885 -
Pste4g02715 1248 Pfam Pentatricopeptide repeat domain 1109 1170 IPR002885 -
Pste4g02715 1248 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Pste4g02715 1248 CDD LysM 118 164 IPR018392 -
Pste4g02715 1248 SMART LysM_2 190 230 IPR018392 -
Pste4g02715 1248 SMART LysM_2 119 166 IPR018392 -
Pste4g02715 1248 SMART serkin_6 351 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02715 1248 Gene3D Tetratricopeptide repeat domain 881 1059 IPR011990 GO:0005515
Pste4g02715 1248 Gene3D Tetratricopeptide repeat domain 1060 1245 IPR011990 GO:0005515
Pste4g02715 1248 SUPERFAMILY HCP-like 891 1193 - -
Pste4g02715 1248 MobiDBLite consensus disorder prediction 249 263 - -
Pste4g02715 1248 MobiDBLite consensus disorder prediction 731 777 - -
Pste4g02715 1248 FunFam PTI1-like tyrosine-protein kinase 3 417 619 - -
Pste4g02715 1248 Pfam PPR repeat 1022 1044 IPR002885 -
Pste4g02715 1248 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1086 1120 IPR002885 -
Pste4g02715 1248 NCBIfam pentatricopeptide repeat 951 984 IPR002885 -
Pste4g02715 1248 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1121 1156 IPR002885 -
Pste4g02715 1248 Pfam LysM domain 120 166 IPR018392 -
Pste4g02715 1248 Pfam LysM domain 191 225 IPR018392 -
Pste4g02715 1248 Gene3D Phosphorylase Kinase; domain 1 322 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02715 Pste-Chr4 19204559 19217007 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02715 16 613 Receptor kinase-like Gene Family AT2G23770 31.726 1.54e-74 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pste4g02715 Pkinase 3.5e-41 CL0016