Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02687 TAATCTGTCTTCTCACTTCTCATGGCTATGCCATCATCTTCTTCTTCCTTTACTTATGCATTCACCTACCATGTTTTCCTCAGCTTCCGAGGAAAAGATACTCGTTATGGTTTCACTGGCAATCTCTACAAAGCTCTTCGTGACAAAGGAATTCACACCTTCATGGATGACCCTGAGCTACGCAAAGGGGACCAAATCACCCCAGCACTTGAGGAGGCAATTCAAAAGTCCAGAATTTTCCTCATCGTCCTCTCTCCAAACTATGCTTCTTCCTCTTTTTGCTTAAACGAACTTGCTCACATCCTCAACTTTAATAAGGAGAAGGGTCTCTTGGTTCTCCCAGTTTTTCATAACGTGGACCCTTCTGATGTTAGATACCATAAAGGTAGTTTCGGAGAAGCATTGGTTAATCATGAACGAAGGGTCAACACAGAGAAGCTGAAGGAATGGAAAGATGCTCTGCATGAAGTAGCCAATTTGTCTGGATATCATTTTAAAACAGGGGATGAATATGAATACAAGTTTACTCAGGAGATTGTTGAATTGGTCTCTAGCAAGATTAATCATGTTCCTTTACCAATGGTGGATCATTTGGTTGGACTAGAGTCACAAATGCTAGAAGTAAAGAAACTTTTGGATATTAGGTCTAATGAAGTTGTCCACATGGTTGGGATCTATGGATTAGGTGGCATTGGTAAATCGACACTTGCTGTCGCAATTTATAATTCAATTGCAGACCATTTTGAAAGTTTGTGTTTTCTTGAAAATGTGAGAGAAAATTCAAATAAATATGGATTACAACATCTCCAAAGCAACATTCTTTCTGATCTAGTTGGAGAGGACATTAAGTTAACTAGTGTTAGACGAGGAAGTTCCATAATACAACATAGACTCCAGCAAAAGAAGGTCCTTTTGATTCTGGATGATGTTGACAAAAAGGATCAGTTAGAGGCAATTGTTGGAGAACCTAATTGGTTTGGTCCTGGCAGTAGAATCATCATAACAAGTCGGGACAAACAATTGCTAGCTTGTCACGGTGTTGAGAGAATGTATGAGGTGAAAGAATTGAACCAGGAAGATGCTCTTCAATTACTATGTTGGAAAGCTTTTAAAAAAGAAAATTTTGATCCATGTTATCATGATGTTTTGAATCAAGCAGTAACTTATGCTTCCGGTCTTCCATTGGCTTTAGAAGTAATAGGTTCCAACTTATATGAAAGAAGCATAGAAGAATGGAAATCTGCTATAAATGGATACCAAAAAATTCCTGATAAAACAATCCAAAAGATACTTAAAGTAAGCTATGATGCTTTGCAAGAAGATGAGCAAAATGTTTTTCTTGACATAGCTTGTTGCTTCAAAGGATATGCATTGGCAAAGGTTGAAGATATACTTCAGGCTCATCATGGCAATTCCATGAAATATCATATTAGAAGGCTTGTTGATAAATCTCTCATAAATATTAGTTGGCTTGGTGTGGTGACACTACATGATTTGGTAGAAGATATGGGTAAAGAACTTGTCAGAAAAGAATCACCAAGAGAACCTGGGAAACGTAGCAGGTTATGGTTCTATGATGATATAATTCAAGTATTAAAAGAAAATGAGGGAAGTTGTCATACGGAAATCGTATTTATGGATTTCCCCTTGATTGACAAAGAAGTTAAATGGGACGGAGTTGCCTTCAAAAAGATGACAAAGCTCAAAACACTTATTATTATGAATTGTCTTTTTTCCAAAAGTCCCGTACATCTTCCTAATACTTTAAGAGTATTGATATGGAGAGGATATCCTTCAAAGAAATTACCATGTGATTTTCATTCGGACAAACTTGCTATATGCGAATTAAGTGGTAGTTCCCTTCCATCACCCGAGTTGGTTGCCTTATTTAAAATGAAGTTCGTGAATTTGAGAAGTTTGAATTTTGACATGTGTACATATTTAACAGAGATACCTAATGTATCTGGTCTCTCTAATTTGGAAGAGTTATCATTTTCTAACTGTGATAATTTAATTACTATCCACTCTTCTGTTGGGCTCTTGGAAAAGCTTAAAATCTTGGATTCTTCTTGCTGTTCCATGCTCAAGAGTTTTCCACCCATCAAGTTGATATCTCTCGAAGAACTTAAACTTTCCGGATGTAGCAGTCTTGAGAGATTTCCAGAAATATTAGAAAAGATAGAAAATATTTCAGATCTTTCGTTGGATGGAACTCCCATAAGAGAATTTCCACATTCATTTCATAAACTTAGTGGAGTGGAGACATTAGAGCTGAGCAATCTTGGTAATCCTACAAAGTTAAGTGGGTTCTGTAATGCTGACATTTTAATTCAAAACATTTTGATGATGCCAGAGCTCTATAGCATTCAAGCTAAGGAATGGGATGGGTTGGTATTGCCTAAGTATGATGAGGGTGCAGAAAAAGTGACCTTAACATTGAGGGACTTGTATCACAGATGCAAAGAAGTATCTTCAAAGGTTCAATGTCTTCATCTCGAACATTGCAACTTGACAGATGAATTTTTTCCTCTATTTCTCCCATATTTTGCTAATGTGAAGGAGTTATTACTCCCAGAAAATAATTTCAAAATTATTCCTGAATGCATAAAACAATGTCATTTTTTAGAAAAACTTGCTTTGGATCGGTGTTATGATCTTGAAGAAATTAAAGGAATTCCTCCAAACCTGAAACTTTTTTCTGCCAAGCTGTGTGGATCCTTGAAGTCCTCATGTAGAAGCATGCTTCTGACTCAGGAACTGCATGAGGCTGGAGACACCCTCTTCTATTTGCCAGAAACAGAGATTCCAGAGTGGTTTGAGTGGCAGAGCAGGCGACCGTCAATTTCTTTCTGGTTTCGTAACAAATTCCCTGCCTTAGTTATTTGTCTTCATGTGGTACCAGACTTTGTAGAGGACCTTTATGTTGATGCTCGTGTCATGCTGACCATCAATGACATTAAACAGCATTGGGGCAAGTGGTGGACTAGAAATACATGTACTTTTTATCTGCAGGGGTCAAAAATGCAACATAATTTAGATGAAGCATTTTCAGAAAATGAATGGAACCATGCAGAGTTTGAACTTAAAGGTTGGCATTGTACACCACCACCCTGTGTAAGATGGGGAATCCATGTATTGAAAGAGCAAAGTTGCAAGGAGGATACTCAATTCACTAATCCCTATAGAAAAACAAAATTGGATGATGATGATGTCAATAATTCAGAATCACAAGATCAACGGATTAAGCTTTTTACTGACTGGGAAGGACCCGGCATAGGCTGGGTGAAGTGCAACATGTATGTCTCATATGATGGAAGTTGTGGAGCTGTTTTTAGAGACTGTGATGGTGAGTGGCTAAATGGCTTTCAGTCAAATCTTGGGAAAACTTCTGATGGCATTATAATGGCAGAACTTCGGGGAATTAATATTGCTCTTGAAACTGCTTGGAAAATGGACATTAGAAGATTATGCATTGAAATGACTTATAATAAAACTATGAAATTGTCTCAATTGATTACTAATGGCTGCGATACCTCCCATCCAGCTTGGCCTTTGATTCAAGATATCAAGAATTGGCAACAACTACGTTGGACCATCAGGTTTTCACATTGTTGGGAGGGTTATATAGATAATTTAGTAGCACAGTGCCTGGCTAATAATATGCATAAGATTTGTGAAGGTGGCATAGTTTTCCTTGCATCTCCTCCTCCTTATGTTTAGTCTGAGCTTATTCTAATTCTAATGGCTATATATATAAAGAGAAAGAATCACAAGACTAGAGCAGCAGTTGCGGAAACAGCAAAGATTACTGAACAGGGAGAATTACAGACACAACTTGCGCAGCAGCAATCAATAATTGGAGTAATCAATGTGAAAGAAGATTCGAGCTCAATCATATCTGTAGATAAAGGACAGCATTGTTAGTTACTTGTGTATTTTTGTTATTATAATATTGTCTATAAATGAAAACAAGAATGTGAAATAAAAATAATAAAAATGTTAATTAACAGTGTAGTACTTATTGTCTGATATAACAAGAGTTAACTGTCAGTTTAG 4056 0.3696 MAMPSSSSSFTYAFTYHVFLSFRGKDTRYGFTGNLYKALRDKGIHTFMDDPELRKGDQITPALEEAIQKSRIFLIVLSPNYASSSFCLNELAHILNFNKEKGLLVLPVFHNVDPSDVRYHKGSFGEALVNHERRVNTEKLKEWKDALHEVANLSGYHFKTGDEYEYKFTQEIVELVSSKINHVPLPMVDHLVGLESQMLEVKKLLDIRSNEVVHMVGIYGLGGIGKSTLAVAIYNSIADHFESLCFLENVRENSNKYGLQHLQSNILSDLVGEDIKLTSVRRGSSIIQHRLQQKKVLLILDDVDKKDQLEAIVGEPNWFGPGSRIIITSRDKQLLACHGVERMYEVKELNQEDALQLLCWKAFKKENFDPCYHDVLNQAVTYASGLPLALEVIGSNLYERSIEEWKSAINGYQKIPDKTIQKILKVSYDALQEDEQNVFLDIACCFKGYALAKVEDILQAHHGNSMKYHIRRLVDKSLINISWLGVVTLHDLVEDMGKELVRKESPREPGKRSRLWFYDDIIQVLKENEGSCHTEIVFMDFPLIDKEVKWDGVAFKKMTKLKTLIIMNCLFSKSPVHLPNTLRVLIWRGYPSKKLPCDFHSDKLAICELSGSSLPSPELVALFKMKFVNLRSLNFDMCTYLTEIPNVSGLSNLEELSFSNCDNLITIHSSVGLLEKLKILDSSCCSMLKSFPPIKLISLEELKLSGCSSLERFPEILEKIENISDLSLDGTPIREFPHSFHKLSGVETLELSNLGNPTKLSGFCNADILIQNILMMPELYSIQAKEWDGLVLPKYDEGAEKVTLTLRDLYHRCKEVSSKVQCLHLEHCNLTDEFFPLFLPYFANVKELLLPENNFKIIPECIKQCHFLEKLALDRCYDLEEIKGIPPNLKLFSAKLCGSLKSSCRSMLLTQELHEAGDTLFYLPETEIPEWFEWQSRRPSISFWFRNKFPALVICLHVVPDFVEDLYVDARVMLTINDIKQHWGKWWTRNTCTFYLQGSKMQHNLDEAFSENEWNHAEFELKGWHCTPPPCVRWGIHVLKEQSCKEDTQFTNPYRKTKLDDDDVNNSESQDQRIKLFTDWEGPGIGWVKCNMYVSYDGSCGAVFRDCDGEWLNGFQSNLGKTSDGIIMAELRGINIALETAWKMDIRRLCIEMTYNKTMKLSQLITNGCDTSHPAWPLIQDIKNWQQLRWTIRFSHCWEGYIDNLVAQCLANNMHKICEGGIVFLASPPPYV 1232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02687 1232 SUPERFAMILY L domain-like 504 906 - -
Pste4g02687 1232 Gene3D Ribonuclease Inhibitor 806 911 IPR032675 -
Pste4g02687 1232 Gene3D - 348 432 IPR042197 -
Pste4g02687 1232 Pfam Reverse transcriptase-like 1096 1212 IPR002156 GO:0003676|GO:0004523
Pste4g02687 1232 Gene3D - 13 176 IPR035897 -
Pste4g02687 1232 SMART till_3 15 153 IPR000157 GO:0007165
Pste4g02687 1232 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 156 IPR035897 -
Pste4g02687 1232 PRINTS Disease resistance protein signature 290 304 - -
Pste4g02687 1232 PRINTS Disease resistance protein signature 383 397 - -
Pste4g02687 1232 PRINTS Disease resistance protein signature 215 230 - -
Pste4g02687 1232 PRINTS Disease resistance protein signature 694 710 - -
Pste4g02687 1232 Pfam TIR domain 16 182 IPR000157 GO:0007165
Pste4g02687 1232 CDD RNase_H_like 1098 1212 IPR044730 -
Pste4g02687 1232 Gene3D - 177 341 IPR027417 -
Pste4g02687 1232 Gene3D - 1089 1215 IPR036397 GO:0003676
Pste4g02687 1232 Pfam NB-ARC domain 197 431 IPR002182 GO:0043531
Pste4g02687 1232 ProSiteProfiles TIR domain profile. 14 180 IPR000157 GO:0007165
Pste4g02687 1232 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 442 IPR027417 -
Pste4g02687 1232 Gene3D Ribonuclease Inhibitor 475 772 IPR032675 -
Pste4g02687 1232 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 742 IPR044974 GO:0006952
Pste4g02687 1232 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02687 Pste-Chr4 19049469 19054542 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02687 10 753 WRKY Transcription Factor Family AT4G12020 29.818 3.90e-75 273