Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02665 GTTTCCCTTTCACATTTCTCTCTTCTTCAAAATAATAAACATACCAAAAACTACACAACACTAGTATTCCATTATTGCTTTCCAACAATTTTTCTTGGTCGCATGGATGAAATTGAAGTTCCTCAATACTTCATCTGCCCCATATCCCTTCAAATAATGAAGGACCCTGTTACGGCCATAACGGGCATAACATATGATAGAGAAAGCATAGAGCAATGGATATTCGCCAACAAGAACACCACATGCCCCGTGTCAAAACAACCCCTCCCTAGAGACTCTGACCTAACCCCTAACCACACCCTTCGTCGTTTAATCCAAGCTTGGTGCACACAAAATGCTTCACTAGGCATCGTTCGAATTCCAACTCCAAAACCCCCTCTCAACAAAATCCAAGTCCTTAAACTCCTCAAAGACCTCAATAACCACAAAAGCCTCATGCAATTGGAGCTTCTTGCCGCCGAGAACGAGAGGAACAAAAAGTGCTTGCTAGAGGCCGGGGTGCCAAAGGCCATGATCATGTTCATTGTGAATTCTCATGAAAAGGGTCAAATCCAAAAGGGTCTCGAAGAAGCTCTTAGCATATTGCAATTTGTCAAGATCCCCAAGGAGGAATGTGCGCTACTTCTGAAGGACAACGACCAAATACTGGATTCTCTAACATGGGTTCTGAGCCAAGACGAGATGGAAAATACCATAGCCATGAAATCTCACGCGGTTATAGTACTAAAAAAACTCATCAACAAATGTGACACGTGTCACATTCTGGAGAGACTAAAACCCGAGTTCTTCGAGAGAATCCTGAAGATTCTAAGACATGGGGTGACCCAACAAGGCGTAAGTGCTGCACTTGAGGTGTTTTTAAGATCGTGTTCGGTGACAAGGAACAGGATCATGATGGTGGAAGCTGGTTTGGTTCACGAACTTATTGAGATTGAACTAGGGAACACAGAGAAGAGAATCACGGAACTAACACTAGCTATATTGTTTCACCTGTGTTCTTGTGCCAATGGTAGAGCCAAGTTTCTGAGGCATGAAGGGTCCATTGCGGTGGTGACAGAGAGAATATTGAAGGTTTCTGCGGCTGTGGATGATAGGGCCGTGTTTGTTTTATCAATGGTTGCCAAGTTTTGTGGCACAAACGTGGCTTTGCAGGAGATGCTGACAGTGGGAACTGTGACGAAGCTTTGTGTGTTGCTTCAAGCTGATTGTGCAAAGTATTTGAAGGACAAAGCAAGAGAGATTCTAAAGGACCACTCTGAGGTTTGGAAGAACTCTCCTTGCTTTCCTCCTTCGTCTTTTGGGGCATACGTGAAATACTGACATGCCATGTGGCACCTTCGTATGCACTTGGAGCTTTGAGTGAGAATCATGGTTTTGTTGTGGGTTTCTTCAACAAGCACTAAGCACCTGCACTTGAAAATAATTTTCTATTAAATGTTTTTTTCTCTTCTTTATGGTAGATATCACTCAAGTGTAATATAGTTTAATTAATATAAGAGTATATGATGGAAGGGAACGAAATTATATGTCT 1531 0.4252 MDEIEVPQYFICPISLQIMKDPVTAITGITYDRESIEQWIFANKNTTCPVSKQPLPRDSDLTPNHTLRRLIQAWCTQNASLGIVRIPTPKPPLNKIQVLKLLKDLNNHKSLMQLELLAAENERNKKCLLEAGVPKAMIMFIVNSHEKGQIQKGLEEALSILQFVKIPKEECALLLKDNDQILDSLTWVLSQDEMENTIAMKSHAVIVLKKLINKCDTCHILERLKPEFFERILKILRHGVTQQGVSAALEVFLRSCSVTRNRIMMVEAGLVHELIEIELGNTEKRITELTLAILFHLCSCANGRAKFLRHEGSIAVVTERILKVSAAVDDRAVFVLSMVAKFCGTNVALQEMLTVGTVTKLCVLLQADCAKYLKDKAREILKDHSEVWKNSPCFPPSSFGAYVKY 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02665 405 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 82 IPR013083 -
Pste4g02665 405 Pfam U-box domain 6 78 IPR003613 GO:0004842|GO:0016567
Pste4g02665 405 Coils Coil 102 122 - -
Pste4g02665 405 Gene3D - 97 388 IPR011989 -
Pste4g02665 405 PANTHER WDSAM1 PROTEIN 3 395 IPR045185 GO:0061630
Pste4g02665 405 CDD RING-Ubox_WDSUB1-like 7 64 - -
Pste4g02665 405 SUPERFAMILY RING/U-box 3 79 - -
Pste4g02665 405 ProSiteProfiles U-box domain profile. 5 81 IPR003613 GO:0004842|GO:0016567
Pste4g02665 405 SMART Ubox_2 9 74 IPR003613 GO:0004842|GO:0016567
Pste4g02665 405 SUPERFAMILY ARM repeat 111 371 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02665 Pste-Chr4 18864071 18866044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02665 2 394 U-box Gene Family AT3G11840 44.444 1.94e-123 363
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02665 4 18864071 18866044 Pste4g02665 4 18864071 18866044 ECH