Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02661 ATGGAGACTATGAAGAAACGATATATATGTACAATGAACTTGACATGGCTCTCGGTTTCTATCCTCTGGTCTTTTGACTCTAAAGTCATCACAACATCCAAGGAACACAATAGCAGTGAAAACGATCTCTCCCTCAGACCAAGTAGTAATAACCAAAAATCACAAGTAAAACCACAAAAGGCACAGAGTGAGGATCTTTTGTGTGAAGAAAGAAGACTACGAAACTGGCTTCAATCATCGACAATTGTTTCATGGGTTGATCCAAAATTCACCCTCCAAACAAGATTCGCAACACTGAGACGGCCTTCAAACTCTCGTACTAATGAACCCCGGTTATGTCCAATACTCCGACACGCCGCCGCCACCCCACGGCGGAGAAACCTTGTATTCCTCAACTCCGCCGCCGCCGGCGGCAGTACCTCCCTACAAGGCCTGCCCCACGCGCCGCCCTCTCACACGCAGCAATTCGTGGGTGTGCCGCTGTCCGCCGCGCAGGAGCCGCCGCCGGCGTCCATGCACCACGACGTCTCCGCCCTGCATGGCTTCCTGCCGCGCGTGCAGTACAACCTCTGGAGCACAATTGACCCCGGCGCAGCGGCGCGTGAGGCTCCACGCGCCACCCAGGGGTTGTCCCTGAGTCTCCACGGCGATGAGGTGCGCTCCTCGGCTTCCGGGGCTTCCAACGGAGGCGGCGTGGCCGGGATTCAGAGCGTGCTGTTGAGTTCCAAGTATTTGAAGGCCACGCAGGAGCTTCTGGACGAGGTTGTTAATGTTAACAGCGGAATTAAGGTTGAACAAGCTAAGAAGAGTTTCGAGAAAACTAAGGTCGTTGGAGAATCATCAACCGCCGCTAGTGGTGATGGTTCTGCTGGTGGAGAGGGAAGTGGGAAACGTAGTTCTGAATTGTCAACTACTGAGAGACAAGAAATTCAGATGAAGAAAGCAAAGCTAATCAACATGCTTGATGAGGTGGAGCAAAGGTACAGACAATATCATAGCCAGATGCAGATAGTGATATCCTCTTTTGAACAAGCTGCGGGAATTGGTTCTGCAAGGACGTACACTGCACTTGCACTGCAAACAATTTCAAAGCAATTTCGGTGTTTGAAAGATGCTATAATGGGACAAATTAAAGCAGCAAATAAGAGTTTGGGAGAAGAGGATTGTTTTGGGGGTAAAATTGAAGGTTCTAGGCTCAAATATGTGGACCATCACCTAAGGCAACAGAGAGCTATTCAACAATTGGGAATGATCCATCACAATGCTTGGAGACCCCAGAGAGGATTGCCAGAGAGATCAGTCTCTGTCCTACGTGCCTGGCTCTTTGAACACTTTCTCCACCCTTACCCCAAGGACTCTGACAAACACATGCTTGCAAAACAAACAGGGCTTACCAGGAGCCAGGTTTCAAATTGGTTCATAAATGCTAGAGTTCGGCTTTGGAAGCCAATGGTGGAGGAAATGTACTTGGAGGAGATGAAAGAGCATGAACTAAATGGGTCAGAGGAGAAATCAAGCAAGAGTGGTGAAGATCCTGTTGCAAAAACAACAACTCCACAAGAGAAACGTCCTACCTCTGAAATTGAGTCTAAAAGTTTCAATTCTAAACAAGATGTTAACAAAAACCAGAATGCTCCAATAGTTTCAACTTCTCCACCATCAACATCAACTATTGGGGCAAATGTTAAGAACCAATCAGGATTTAGTTTCATTGGGTCATCAGAGCTAGATGGAATCACACAAGGAAGTCCCAAAAAGCCAAGGAACCATGAAATTCTACACTCCCCAAACCGTGCCCCTTCAATCAACATGGATGTCAAAGTGAATGACGTAAACAATGAACAACAACTCTCAATGGATGAAAGGCATAGCAGAGATGGCTACTCTTTCATGGGGAACCAAACAAACTTCATTAGTGGTTTTGGACAATACCCAATGGAGGAAATTGGTAGGTTTGATGCTGAGCAATTCACACCAAGGTTTTCAGGTAATGGAGTTTCCCTTACTCTTGGTCTTCCTCATTGTGACACATTGTCAGGAACACACCAAACCTTTCTTCCAAATCAAAACATTCAACTAGGAAGAGGGTTGGACATTGGTGAACCAAACCAATTTGGTGCCTTGAATAATTCCACTTCTCACACTTCAGCAACATTTGAGAGCATCAACATGCAGAACCCCAAGAGGTTTGCTGCACAACTACTACCAGACTTTGTGGCCTAAATAAGACATTGAAAATGGGATAGATCATAGTTGGTAACATTGGTTATGGGTCTCATATTTTCTTCTGATTCAAGTGCTTGTTCTGGGGAGTAGTGATAAATCTTAGTGTAAAGAAAGAAGGAATTTTACTCTAGTATAGGTTCATACCTTGCATAGAACCATTTGAGTTCTTAGATAGCTTAGCGATTTGAAAGTATATGGTTATTTGAGATTGTATATTATTTTTGTAATTTTTGAAGATGGGTAGATTGGTTGGTGTCATAAAATTTCAATTGGTAAAGATAACAATATATTTTCAATTGAGTATATGCTATGTAATATATTGCAAATCCTCC 2558 0.4468 METMKKRYICTMNLTWLSVSILWSFDSKVITTSKEHNSSENDLSLRPSSNNQKSQVKPQKAQSEDLLCEERRLRNWLQSSTIVSWVDPKFTLQTRFATLRRPSNSRTNEPRLCPILRHAAATPRRRNLVFLNSAAAGGSTSLQGLPHAPPSHTQQFVGVPLSAAQEPPPASMHHDVSALHGFLPRVQYNLWSTIDPGAAAREAPRATQGLSLSLHGDEVRSSASGASNGGGVAGIQSVLLSSKYLKATQELLDEVVNVNSGIKVEQAKKSFEKTKVVGESSTAASGDGSAGGEGSGKRSSELSTTERQEIQMKKAKLINMLDEVEQRYRQYHSQMQIVISSFEQAAGIGSARTYTALALQTISKQFRCLKDAIMGQIKAANKSLGEEDCFGGKIEGSRLKYVDHHLRQQRAIQQLGMIHHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEMKEHELNGSEEKSSKSGEDPVAKTTTPQEKRPTSEIESKSFNSKQDVNKNQNAPIVSTSPPSTSTIGANVKNQSGFSFIGSSELDGITQGSPKKPRNHEILHSPNRAPSINMDVKVNDVNNEQQLSMDERHSRDGYSFMGNQTNFISGFGQYPMEEIGRFDAEQFTPRFSGNGVSLTLGLPHCDTLSGTHQTFLPNQNIQLGRGLDIGEPNQFGALNNSTSHTSATFESINMQNPKRFAAQLLPDFVA 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02661 740 MobiDBLite consensus disorder prediction 496 510 - -
Pste4g02661 740 SMART prehox3 233 375 IPR006563 -
Pste4g02661 740 Pfam Associated with HOX 238 374 IPR006563 -
Pste4g02661 740 CDD homeodomain 423 484 IPR001356 GO:0003677
Pste4g02661 740 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 161 507 - -
Pste4g02661 740 Pfam Homeobox KN domain 440 479 IPR008422 GO:0003677|GO:0006355
Pste4g02661 740 MobiDBLite consensus disorder prediction 42 61 - -
Pste4g02661 740 SUPERFAMILY Homeodomain-like 424 490 IPR009057 -
Pste4g02661 740 MobiDBLite consensus disorder prediction 573 603 - -
Pste4g02661 740 FunFam BEL1-like homeodomain protein 9 426 488 - -
Pste4g02661 740 SMART HOX_1 423 487 IPR001356 GO:0003677
Pste4g02661 740 MobiDBLite consensus disorder prediction 36 63 - -
Pste4g02661 740 MobiDBLite consensus disorder prediction 530 561 - -
Pste4g02661 740 Coils Coil 307 334 - -
Pste4g02661 740 Gene3D - 419 496 - -
Pste4g02661 740 ProSiteProfiles 'Homeobox' domain profile. 420 483 IPR001356 GO:0003677
Pste4g02661 740 MobiDBLite consensus disorder prediction 496 561 - -
Pste4g02661 740 MobiDBLite consensus disorder prediction 275 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02661 Pste-Chr4 18831690 18842618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02661 147 740 Homeobox Transcription Factor Family AT2G35940 51.502 4.88e-174 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pste4g02661 POX 2.3e-49 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02661 4 18831690 18842618 Pste4g02661 4 18831690 18842618 ECH
Pste5g02448 5 17022078 17024115 Pste4g02661 4 18831690 18842618 PCT