Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02659 TCTCTAGAAGTATACATCAGCGTCCCTCTCAGAAACATATATAATAGGCATTCATAGCTTTGTGATCGCACATAAGAATGGCTTTCGTTCCGACAATTCATGCCACGGATGGGTTGCCAATAAGTTTCGAAAGTGAAAAGTTCTGTGGAAAACAGAAGAAACTGATAGATATTGAAGAGAGGCTTGCAATCTCGCAGACGCATTGCAATGGCGAGACAGAAGCAAATTTGGGTTCCATCATTACTGAATACCTGCAGATTCTACAGCGCCGCAACTTGCGCAACTTGGGTTACCCTACTAATCAAGACTTCAACTATGACACATTAAATTTGTTACTTCATTTTCACCTAAATAATGCTGGTGACCCATTTCTGGGGAGTAGCTTTTCCCTAAATTCAACAGTTTTTGAAGTTTGTGTGCTTGATTGGTTTGCAAGTTTGTGGGAGATAAAGAAGAATGAGTATTGGGGCTATGTCACAACTGGTGGAACTGAAAGCAATCTTCACGGGATTTTAGTAGGGAGAGAACAACTTCCAAACGGAATATTATATACGTCACAAGAATCACATTATTCAATCTTCAAAATATCAAAAATGTATCGAATGCAATGCGTGAAGGTTAGCACATTAGTCTCCGGTGAGATTGATTGTGTCAATCTAAAGTCTTTACTTCTTGAAAACAAAGGCAAGCCAGCCATCATCAATTTAAACATAGGGACAACTATGACAGGAGCTATTGATGACCTTGATCTTGTAATACAAACATTGAAGGAATGTGGTTTCACTGAGGATCGATTTTATATCCACTGTGATGGAGCTCTATTTGGAATGATGTTGCCTTTTGTCAAACAAGCACCAAAGATTACATTCAAGAAGTCTATTGGAAGTGTAACTATATCTGGACATAAGTTCTTGGGATGTCCAATTCCATGTGGTGTTGTAATAACTCGTTTAGAATACATTAATGCACTATCTAAAGATATTGAAATCATTGCTTCAAGGGATGCAACAATCACAGGTAGTCGTTCTGGGCATGCTCCTATCTTCATTTGGTATGCCTTAAAAAAGAAAGGTTTAATAGGACTCCAAAACGAAGTGCAACAATGCATAATGAATTCACATTATTTAAAAAATCGATTACATGATGTTGGAATTGGTGTAATGTTAAATGAGTTTAGCAACATTGTCATATTTGAGAGACCTTTAGATGATGACTTTACTCGTAGGTGGAACTTGGCATGCAATGGAAATATTGCGCATGTGGTGGTGATGCAACACATTACCATTGAAATATTAGACTCATTTGTTCACGAATTTAGTTTGAAACGATCCATTTGGTATAAAGATGGACTATTTCAACCTTTATGCATTGCAAAGGACATTGGTTTTGAAAATTGTGCTTGTTCAATACACCACTCAATATCATGATTGGGTAATTATTTAATACACACGAGATGTTGATCTAATTTTATTTTTTTTTCATTTAAGCATGTTATCTAATTAAGTTTGTTCTTATAATCTATGTGA 1526 0.3624 MAFVPTIHATDGLPISFESEKFCGKQKKLIDIEERLAISQTHCNGETEANLGSIITEYLQILQRRNLRNLGYPTNQDFNYDTLNLLLHFHLNNAGDPFLGSSFSLNSTVFEVCVLDWFASLWEIKKNEYWGYVTTGGTESNLHGILVGREQLPNGILYTSQESHYSIFKISKMYRMQCVKVSTLVSGEIDCVNLKSLLLENKGKPAIINLNIGTTMTGAIDDLDLVIQTLKECGFTEDRFYIHCDGALFGMMLPFVKQAPKITFKKSIGSVTISGHKFLGCPIPCGVVITRLEYINALSKDIEIIASRDATITGSRSGHAPIFIWYALKKKGLIGLQNEVQQCIMNSHYLKNRLHDVGIGVMLNEFSNIVIFERPLDDDFTRRWNLACNGNIAHVVVMQHITIEILDSFVHEFSLKRSIWYKDGLFQPLCIAKDIGFENCACSIHHSIS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02659 449 Gene3D - 84 327 IPR015421 GO:0003824
Pste4g02659 449 SUPERFAMILY PLP-dependent transferases 71 413 IPR015424 -
Pste4g02659 449 Pfam Pyridoxal-dependent decarboxylase conserved domain 107 356 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pste4g02659 449 PANTHER - 40 446 - -
Pste4g02659 449 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 270 291 IPR021115 GO:0016831
Pste4g02659 449 Gene3D Aspartate Aminotransferase, domain 1 328 418 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02659 Pste-Chr4 18816502 18819283 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02659 212 358 Calmodulin-binding Proteins AT2G02010 26.087 5.99e-06 46.6