Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02656 ATTATTATAAGAGGAAGGAAGTAGGGGGAAGTTCCCACTAGCTAGCTATGAACACATTGATAGGCTTGAGGCTTTCACACTGATTGCGCCTCAAGCTGGTCGCATATTACAAGTACAATGGAGAATTCAGTGGGGAAGAACATGGCAATGACAAGCCATGTAACTGATCAGCTGTTGCCAACAGTTGTCTCTAAAAAAGAAGAGAAGAAAATAGAGATTGAAGAGAAAAATGGTGATATGAACCTTGCTATCGCCCAGGGCAAAGGCCACACTCAAGCTCATCTGGCTTCACTCATTAATCAATACGTGGACACTCTAAATCAGTGCAGCTTGCGCAACCTGGGTTTCTCCGATAATCAAGACTTCAACTATGATGCATTAGCATCCTTACTTCATTTTCATTTGAACAATGCCGGTGATCCATTTCTAGGAAGCAACTTTTCTCTAAATTCAATGGCATTTGAAGTTTGTGTGCTTAATTGGTTTGCAAATATATGGGAGATAGAGAAGCATAACTATTGGGGATATGTTACAACTGGTGGAATTGAAGGGAATCTTCACGGGATTTTAGTAGGGAGAGAACAACTTCCAAATGGAATTTTGTATACCTCACAAGATTCACATTATTCAATCTTCAAAATAGCTAGAATGTACCGAATGAAATGCATAAAGGTTAGCACTTTGGTGTCTGGCGAGATTGATTGCATTGACCTAAAGGCTATACTTCTTGCTCACAAAGATAAGCCAGCCATCATCAATCTAAATATAGGGACAACTTTGAAAGGAGGAATTGATGACGTTGATAATGTTATACAAACACTTCATGAATGTGGTTTCAGCAGTGATCAATTCTACATTCATTGCGATGGAGCTGTGTTTGGAATGATGTTGCCATTTGTTAAACAAGCACCAAATATTACTTTCAAGAAACCTATCGGAAGTGTAACTATTTCTGGTCATAAATTCTTGGGATGTCCAATTCCTTGTGGTATTGTAATAACTCGTTTACAATACATCAATGCATTATCTAAAGATGTTGAATATATTGCTTCAAAGGATGTTACAATCACAGGTAGTCGTTGTGGGCATGCACCGATTTTCCTTTGGTATGCGATCAAAAGAAAAGGTTTAATAGGAGTTCAAAATGAAGTGCAAAAATGCATAATAAATGCGCGATATTTGAAGCATAGACTACGTGATGTTGGAATTTGTGCAATGTTAAACAAATTTAGCAATATTGTCATTTTTGAAAGGCCCTTGGATAAAGACTTTATTCGAAGGTGGAATTTGGCATGCTATGGAAATATTGCACATGTAGTGGTGATGCAACATGTTACCATCGAAATGCTGGACTCATTTATCAGTGAACTTCTTCATAAACGACCCACTTGGTTCAAAGATGGATGTTATAAACCGCTATGCGTTGCAAAGGATATTGGTTCTGAAAATTGTGTTTGTTCAAAGCACAATTATGACGTGATTCAGAATCTATGGAGTAAATAATAAATATGTGATGTTATAAATGTATGCTTATACTTTCAAAAGTGAGTTGATGGAACTTGTCCATCTGACTTGCAAAGAAAAATTGAGTAGCAAAATGAAATTATAACAATAAGAGAATAAAAGTATAATTTGTTAAACTTGAATAGGACCGGTTCAC 1660 0.3669 MENSVGKNMAMTSHVTDQLLPTVVSKKEEKKIEIEEKNGDMNLAIAQGKGHTQAHLASLINQYVDTLNQCSLRNLGFSDNQDFNYDALASLLHFHLNNAGDPFLGSNFSLNSMAFEVCVLNWFANIWEIEKHNYWGYVTTGGIEGNLHGILVGREQLPNGILYTSQDSHYSIFKIARMYRMKCIKVSTLVSGEIDCIDLKAILLAHKDKPAIINLNIGTTLKGGIDDVDNVIQTLHECGFSSDQFYIHCDGAVFGMMLPFVKQAPNITFKKPIGSVTISGHKFLGCPIPCGIVITRLQYINALSKDVEYIASKDVTITGSRCGHAPIFLWYAIKRKGLIGVQNEVQKCIINARYLKHRLRDVGICAMLNKFSNIVIFERPLDKDFIRRWNLACYGNIAHVVVMQHVTIEMLDSFISELLHKRPTWFKDGCYKPLCVAKDIGSENCVCSKHNYDVIQNLWSK 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02656 461 Gene3D - 91 333 IPR015421 GO:0003824
Pste4g02656 461 PANTHER - 26 451 - -
Pste4g02656 461 SUPERFAMILY PLP-dependent transferases 80 418 IPR015424 -
Pste4g02656 461 Gene3D Aspartate Aminotransferase, domain 1 334 422 IPR015422 GO:0003824
Pste4g02656 461 Pfam Pyridoxal-dependent decarboxylase conserved domain 161 363 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pste4g02656 461 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 275 296 IPR021115 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02656 Pste-Chr4 18781788 18790527 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02656 217 370 Calmodulin-binding Proteins AT3G17760 26.667 3.15e-07 50.8