Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02649 CAGAAACAAAAGCTTGGAAGGCTCCAAAACTCTTCTTAATCTAACAAACACCTTTTGTCGTTGGTAGCAACCTCAATCTACATACATCGCATTGTCACTATTTGTAGTTGTTGGTGTCAATAGCCAATCTCAATCTACATCGCACACTCTCTCCCTCCACACAATGCAATCTCCGTTTCACACCTCGCCGTAACGCGATGGAGAAGAACGTGCTTTTCTCTGTCTTCCTCACGCTCTTCACGGTCGTTGTAACGGAAACGGACCCCAACGATGTGAAGATTCTTAACAGCTTCAGAAAAGGTTTGAAAAATTCGGAACTATTACCGTGGCCCGAGGAAGGAGGCGACCCGTGCGGGAACCCACCGTGGAAATACATCTACTGCAACGGAAACAGAGTCGCTCAGATTCAGACCAAGAACTTGGGCCTGGTGGGCCCGCTTCCTTCAAACTTCAACCAGCTCACCATGCTTGAAAATCTGGGCCTGCAGAACAACAACCTCAACGGGCCATTGCCTTCGTTCAAAGGCTTGTCGAATTTAAAATACGCCTTTCTCAGCCGCAACGACTTCGATTTCATTCCCTACGATTTCTTCGATGGGCTTTCCACTCTTGAGGTGTTGTCTTTGGATTACAACAACCTTAACGGGAGCAGTGGCGGTTGGAGCTTCCCTCCTACGTTGGAGGATTCCGCGCAGCTGAGGAACATAACTTGCATGAGTTGCAATTTGGTGGGCCCCATTCCGGACTTTCTCGGCAACATGGCTTCGCTGTCGGTGTTGATGCTTTCCGGAAACAACTTAACTGGGGAGATTCCGGCGACGTTGGGCGGCGTTCCGGCGTTGCAGATTCTGTGGCTGAACAACCAGCACGGCCAGGGGCTCACCGGGAAAATCGACGTGGTGACGAGTATGGTCTCCTTGTCGAGTTTGTGGCTTCACGGGAACAAGTTCCAAGGGAGTGTTCCTGCGAACATTGGGGATTTGGTTTCTCTTAAGGATTTGGATCTTAATGGGAATGAGTTTGTTGGGTTGATTCCCAGTGGTTTGGGCAAAATGAAGTTGGATAATTTGGATTTGAATAATAACCATTTTATGGGTCCGATCCCGGATTTTGCAGCGGGTAAAGTGAGTTATGAGAACAATGATTTTTGTTTGTCGAAGCCTGGGGTTATGTGTGGTTTTGAAGTGATGGCGCTGTTGGATTTTCTTGAGGGGTTCGGGTATCCTGGGATTTTGGTTGATTCGTGGAGTGGGAATGACCCATGTAATGATGGGCCATGGTTGGGGATAAAGTGCAATGAGAATGGAAAAGTGGAAATGATTATTTTGAATAACTTTAATCTTAGTGGAACTTTGAGTCCTTCTGTTGCAAAGTTGGATTCTCTTGTTCAGATAAGGTTGAAAGGTAATCATATCAGTGGTAGTATACCGAGTAATTGGACCAGTTTGAGATCTTTGACATTGTTGGATCTGAGTGGTAATAACATTTCGCGGCCCTTGCCAAATTTTGGAAAAGGGTTGAAGCTTGTGATTGATGATAGTCCTCAGTTAGGTGCTCCGCAAACTTCTGTTTCTTCACCAGGTTCAGGTTCTGGATCGTCATCTGGAAAGGGTGAAGGTCCTTCATCTGAAAAGCATAATCCCAATCCATCTGAAGACTCTAGTTCAGACCCCAATTACAGTAGTGGTTATATTGAGCAAAACAATTCCAAAGGGAAAAGCTTGGTTCCAATTGTGGTTCCTATTGCAGGTGTTGCACTTGCGGCTTTTCTGCTCATTCCGCTTTATGTGTATTGTTTCAGGAAGAGAAAGGGTGTCTCTGAGGGTCCAGGGTCACTAGTGATTCACCCTAGGGATGCTTCTGATCCAGACAATGTGCTGAAGATTGTTGTTGCTAACAACAGCAATGGAGCTGTGTCCACAGGGACAGGAACTGGGTCTGGGATTATGACTGGAAGTGGGGAGTCTCATGTGATTGAAGCTGGAAACCTTGTGATATCAGTTCAGGTTCTTCGAAATGTGACCAAGAATTTTGCGCGGGAGAATGAGCTTGGACGTGGTGGATTTGGGGTCGTTTACAAGGGAAAGTTGGATGATGGGACTAAGATTGCAGTAAAACGAATGGAATCTGGTGTGATTACCAGCAAAGCCTTGGATGAATTCCAGTCTGAGATTGCAGTTTTATCAAAAGTCCGGCACCGGCATTTGGTGTCTCTTTTGGGTTATTCAGTTGAAGGTAACGAGAGGATTCTAGTTTATGAGTATATGCCACAAGGGGCTCTAAGTATGCATCTTTTCCATTGGAAGAGCATGCAACTGGAGCCACTCTCTTGGAAGAGGAGGCTCAATATTGCCTTGGATGTTGCTAGAGGAATGGAGTATCTTCATGGTCTGGCTCACCAGATCTTCATCCACAGAGATCTTAAGTCGTCAAATATTTTGCTTGGGGATGACTTTAGAGCAAAAGTCTCAGATTTTGGATTGGTAAAACTTGCTCCTGATGGCAAAAAATCTGTAGTTACCCGGCTTGCTGGTACATTTGGATATTTGGCACCAGAATATGCAGTGACAGGAAAAGTCACTACCAAAGCAGATGTTTTCAGTTTTGGAGTTGTTCTAATGGAGTTGTTAACTGGATTAATGGCACTTGATGAGGATAGACCTGAGGAAAAACAATATTTGGCATCGTGGTTCTGGCATGTAAAATCAGACAAGGAGAAACTAATGGCTGCTATTGACCCAACCCTCGACATAAAGGAAGAAATGTTTGATATTGTCTCCATCATTGCTGAGTTAGCTGGACACTGCACTGCCAGAGAACCGAACCAAAGGCCAGATATGAGTCATGCTGTGAATGTTCTTTCGCCACTTGTTCAAAAATGGAAACCACTAGATGATGACACTGAGGAGTATTCCGGCATAGATTATAGTCTTCCCCTTCATCAAATGGTGAAGGACTGGCAGGAGACAGAAGGAAAGGACTTGAGCTATGTGGACCTACAAGACAGTAAGAGCAGTATCCCTGCAAGGCCTACTGGGTTTGCTGAATCCTTTACTTCTGCTGATGGCCGGTGAAACAAGTTGTTTATTGATTTCTTGAATGCACCTTGTTTTCCTTTTTCTCGTTTTCTGGCGGTGTAACACGAATGAAGTCACCTCTCCCATTTCTACTCTCCATTCCACGGTCTTAAAATTGCTTTCGGGGTTGCAGTTTTGAAGTCTTTGGAACCTTGACAATGCAGAAAATTGTAGACTAATAATGTGTTTGCATTGTGGTGGTTTCGGAGACCATGATAGTTTTGATGATGCGGTCACAATTGCGGTTTTATACCTCGATATAAAACAGTTCTACTTCCTTCCATGTCTCCGCAAGTGGTTAAAAGAATAAAGCTCTTTCAAAGTTGGAAAATTTCTTTACTCACATGTGACTTTTATAACGGGAGGGCTGTGAAATGGAGATTAGTGATTTGGTTACAATGCAGACAACAAAGAATGCTCTTTTCTCTCAGTTCTTCCTGTCTACAACAAGTGTTTAGTGTCAGTGATGTAATGGTGGTTTTAAGAGTTTTCATTTGTATGTTTTATATTTTCAACTTTGATATTCAGGAGTCAATGGTTGTAGATAGGGAACCGTGATAAATGAGAATGCTTGTTATTTGTTCATTCATTAACATTTCTGCTTTCTTTTGTCATGTGAAAC 3699 0.4398 MEKNVLFSVFLTLFTVVVTETDPNDVKILNSFRKGLKNSELLPWPEEGGDPCGNPPWKYIYCNGNRVAQIQTKNLGLVGPLPSNFNQLTMLENLGLQNNNLNGPLPSFKGLSNLKYAFLSRNDFDFIPYDFFDGLSTLEVLSLDYNNLNGSSGGWSFPPTLEDSAQLRNITCMSCNLVGPIPDFLGNMASLSVLMLSGNNLTGEIPATLGGVPALQILWLNNQHGQGLTGKIDVVTSMVSLSSLWLHGNKFQGSVPANIGDLVSLKDLDLNGNEFVGLIPSGLGKMKLDNLDLNNNHFMGPIPDFAAGKVSYENNDFCLSKPGVMCGFEVMALLDFLEGFGYPGILVDSWSGNDPCNDGPWLGIKCNENGKVEMIILNNFNLSGTLSPSVAKLDSLVQIRLKGNHISGSIPSNWTSLRSLTLLDLSGNNISRPLPNFGKGLKLVIDDSPQLGAPQTSVSSPGSGSGSSSGKGEGPSSEKHNPNPSEDSSSDPNYSSGYIEQNNSKGKSLVPIVVPIAGVALAAFLLIPLYVYCFRKRKGVSEGPGSLVIHPRDASDPDNVLKIVVANNSNGAVSTGTGTGSGIMTGSGESHVIEAGNLVISVQVLRNVTKNFARENELGRGGFGVVYKGKLDDGTKIAVKRMESGVITSKALDEFQSEIAVLSKVRHRHLVSLLGYSVEGNERILVYEYMPQGALSMHLFHWKSMQLEPLSWKRRLNIALDVARGMEYLHGLAHQIFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGKKSVVTRLAGTFGYLAPEYAVTGKVTTKADVFSFGVVLMELLTGLMALDEDRPEEKQYLASWFWHVKSDKEKLMAAIDPTLDIKEEMFDIVSIIAELAGHCTAREPNQRPDMSHAVNVLSPLVQKWKPLDDDTEEYSGIDYSLPLHQMVKDWQETEGKDLSYVDLQDSKSSIPARPTGFAESFTSADGR 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02649 958 Pfam Leucine rich repeat N-terminal domain 331 367 IPR013210 -
Pste4g02649 958 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Pste4g02649 958 FunFam Receptor-like kinase TMK4 23 323 - -
Pste4g02649 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Pste4g02649 958 PANTHER OSJNBA0070M12.3 PROTEIN 5 958 - -
Pste4g02649 958 ProSitePatterns Protein kinases ATP-binding region signature. 618 640 IPR017441 GO:0005524
Pste4g02649 958 Gene3D Ribonuclease Inhibitor 22 324 IPR032675 -
Pste4g02649 958 FunFam Leucine-rich repeat receptor-like kinase 328 454 - -
Pste4g02649 958 MobiDBLite consensus disorder prediction 452 500 - -
Pste4g02649 958 Gene3D Ribonuclease Inhibitor 328 453 IPR032675 -
Pste4g02649 958 MobiDBLite consensus disorder prediction 938 958 - -
Pste4g02649 958 SUPERFAMILY Protein kinase-like (PK-like) 592 888 IPR011009 -
Pste4g02649 958 Pfam Protein tyrosine and serine/threonine kinase 615 887 IPR001245 GO:0004672|GO:0006468
Pste4g02649 958 Gene3D Phosphorylase Kinase; domain 1 583 689 - -
Pste4g02649 958 SUPERFAMILY L domain-like 21 303 - -
Pste4g02649 958 FunFam receptor protein kinase TMK1 690 907 - -
Pste4g02649 958 SMART serkin_6 612 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02649 958 ProSiteProfiles Protein kinase domain profile. 612 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g02649 958 Gene3D Transferase(Phosphotransferase) domain 1 690 908 - -
Pste4g02649 958 CDD STKc_IRAK 618 891 - -
Pste4g02649 958 SMART LRR_typ_2 111 134 IPR003591 -
Pste4g02649 958 SMART LRR_typ_2 188 212 IPR003591 -
Pste4g02649 958 SMART LRR_typ_2 417 440 IPR003591 -
Pste4g02649 958 SMART LRR_typ_2 135 164 IPR003591 -
Pste4g02649 958 SMART LRR_typ_2 262 286 IPR003591 -
Pste4g02649 958 FunFam receptor protein kinase TMK1 574 689 - -
Pste4g02649 958 SUPERFAMILY L domain-like 329 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02649 Pste-Chr4 18739142 18743483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02649 79 888 Receptor kinase-like Gene Family AT5G07280 30.976 1.05e-79 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pste4g02649 PK_Tyr_Ser-Thr 1.3e-46 CL0016