Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02644 GTTGAAAGAAAAAAGGTTTTGGAAGGTGGTAAAAACCCTACTACAGACATCATTAAGGAAGCAGAGTCGGAGATTTTAAGGTTAAGACGAAAAGGATCATCGATGGCAGAGCCAAAAGAAGGTTTGGGTTCGGAGATGTCTCTGAAGGATCAGGGCAACGAGTTTTTCAAGTCAGGAAAGTATCTCAAAGCTGCTGCACTCTACACTCAAGCCATCAAGCAAGACCCTTCTAACCCTACTCTCTATAGTAATCGTGCTGCAGCATTGCTACAATTGGATAAGCTTAATAAAGCTCTTGATGATGCTGAGATGACAATCAAGTTAAAACCCCAATGGGAAAAGGCAAATGCTTATCTATTAATATTAATATCTGAGAAGGGAAGCATATTGGAGGCCTTGAAACGATATGATGAGGCTTTAGATGCCTTTCAGATAGCATTGCAGTATAACCCGCAGAGTCAAGAAGTATCAAAAAAGATAAAGAAGATAAACCAACTGGTGAAAGATAGTAAGCGAGCCCAAGAAGTGGAGAATATGAGATCCAATGTTGATATGGCCAAACATTTAGATACATTGAAATCTGAAATGTCTGGAAAGTATGTATCTGAAGAATGCTGGAAAGAATTGTTCTCATTCCTTGTTGAGACTATGGAAACTGCTGTAAAATCATGGCATGAAACTTCTTCAGTGGAGGCTAGAGTTTACTTTCTTCTGGATAAGGAAAAGACTCAGACTGATAAGTATGCCCCAGTTGTGAATATTGATAAGGCCTTTGAATCACCACATACACATGGGAACTGCTTTTCATTTCTTAGGCAGTATGCTGAGGAGTCTTTCTCCAAAGCAGCCTGCTTGGTGACTCCAAAAAGCATAATTGCTTATCCACAGGTCTGGAAGGGGCAAGGATCAAGAAAGTGGAAGCATGCCCAGAGTGATGGATTCTTTGTGCAATTTGAGTCTCCTGCCCTGCGAAAGCTGTGGTTTATACCCAGTTCAAATGAAAAGGGACAGACATTGTGCAGGGATCCTGAGGTTTTGGACATTGGTTCTCATGAAGTTCTTCCCCGGTTATTCAAAGAAAAGATGCCCCGTTCATAGTGTACTTTACTAGTACTTGGTGTATATTTATTTCACAAGGTAAAAATGACAAGCTCACACGAAGGTTGCATGTTCACCAAATACAGACACAATGTGGTGCTGATGTTTTGATGTCTTTTTGGGATGTGAGAAATGCTGACAGGATGTGTGCTTCATGATTTTGTTAGATCTGTTTAATTATTTATTAATTATTTTAAATTATCCAAGCCATCAGGAGTTGCATTTTCGATATTTTTGCTTGCTTGCCTTTTTCTTGTTGTGGTTTGGAAACTTTGACCTTTAGTTTGTTTATTCCAGATATGACACTTCTATGTTAGCATAGATATTTGATCTGTATTTTTTGTGATTCAGATATGAATTTTGAATTTGAT 1469 0.3873 MAEPKEGLGSEMSLKDQGNEFFKSGKYLKAAALYTQAIKQDPSNPTLYSNRAAALLQLDKLNKALDDAEMTIKLKPQWEKANAYLLILISEKGSILEALKRYDEALDAFQIALQYNPQSQEVSKKIKKINQLVKDSKRAQEVENMRSNVDMAKHLDTLKSEMSGKYVSEECWKELFSFLVETMETAVKSWHETSSVEARVYFLLDKEKTQTDKYAPVVNIDKAFESPHTHGNCFSFLRQYAEESFSKAACLVTPKSIIAYPQVWKGQGSRKWKHAQSDGFFVQFESPALRKLWFIPSSNEKGQTLCRDPEVLDIGSHEVLPRLFKEKMPRS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02644 331 Pfam TPR repeat 18 58 - -
Pste4g02644 331 Coils Coil 51 71 - -
Pste4g02644 331 ProSiteProfiles TPR repeat profile. 11 44 IPR019734 GO:0005515
Pste4g02644 331 PANTHER TPR REPEAT CONTAINING PROTEIN 2 326 - -
Pste4g02644 331 Gene3D Tetratricopeptide repeat domain 7 170 IPR011990 GO:0005515
Pste4g02644 331 ProSiteProfiles TPR repeat profile. 86 119 IPR019734 GO:0005515
Pste4g02644 331 SMART tpr_5 86 119 IPR019734 GO:0005515
Pste4g02644 331 SMART tpr_5 11 44 IPR019734 GO:0005515
Pste4g02644 331 SMART tpr_5 45 78 IPR019734 GO:0005515
Pste4g02644 331 SUPERFAMILY TPR-like 13 129 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02644 7 107 U-box Gene Family AT3G07370 30.097 2.06e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02644 4 18681504 18694049 Pste4g02644 4 18681504 18694049 ECH