Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02637 CAAAAAGCCTAGCTAGTCTACACTGTGCAACAAGGCGCAAAAAAATACAACCCTAGAAGAAGAAGAGTGTTTTGTTATAATCGCATTGTATACAAAATAAATTTAGTAATTCTGGGGCTCAAATCTTTGTTACCATTCCTTCACCGCCGCTCTATCTCTTTTGTTGCTCCCCACTCTCCCTCTTCTCCTCACCGCTTTCCCTGCCTTCTCGATTCTCTGTGTCGCCTTCAGATTCACTTACGCTACACCCCCACCCCCACCCCATCCCAATCTTGCTCTTTCTTTCTCCCTTTTCCTTACAATTTGTGTGATTCGATCTTATTCTTGGGTTTCGCTGTTCCCTTATTCCAGCGCATTCGCGGGAGAAGAGAAAACCCTAATCGGACATGGGGAAGAAGAAGCCGGCGGCGAGGGACGACGAGAACGCGTCGCAGCAAGGCGGCGGCGGCGGAAAATCGAAGAAGAAGGCGGTTGTCATCGACGACGACGAGTATGGCATCGGAACCGAGCTCTCTGAGGAGCCAGCGCTGGTGCCGGAAGAGAAACCTGCCGCGGCGGGAAAGAAGAAAGGTAAGAAAGGTAATGCTAAAGCTAAAAGTAACGATGGTGATATTGATGAGGATGAGGATGTGCCTGAAGTTGTGTTTTCTGGGAAGAAGAAGGGCAAGAATAAGAAAGGTAGTGGGAGCGGTGTGTTCTCTGCATCTAGTTTTGGTTTGCTTGGTGATGAGGGAGATGATGATGAAGATAAATCTGAGTTAACCGGCGAGGAAGAGGATGAGCCTGTGGTTAGTTTTTCAGGTAAGAAGAAGCCATCGAAGAAAGGAGGAGGTAGTTTGTTCAGTGCATCTGCTTTTGATGCCATTGATGACGATGAGGGTGGTAAGGATGATGATGAGGATGAGGATGAGGATGAGCCTGTGATTAGTTTTTCTGGCAAAAAGAAGTCCTCAAAGGGGTCGAAGAAAGGCAGTGGTAGTTTGTTCTCTGCTTCTGCTTTTGATGATGGTGAGGTGGTGGATGATAAGAATGATAATGTTGATGATGATGAGCCTGTTATTGCTTTCACTGGGAAGAAGAAATCCTCTAAAGGAGGCAAGAAGGGTGGTTCTGTGTTTTCAGCTGCTGTTCTTGGTGACATTGATGACGGAGAGGAGAATAAGGATGATGCTGCTGGTGATGACGACGACATTGGTCCAATCACCTTTTCTGGTAAAAAAAAGACGTCTTCCAAAAAGGCTGCGAGCAAACGTGCCTCTGTTGAGGATGATGTTTCTGTACCCGAGTCTGGTAAGGATGTTGATGACAAGGAAGAGGATGATGTTTCTTTAGTTGTATTTTCAGGTAAAAAGAAGTCTTCTAAAAAGAAGGGCAGTGGTACTGCTGCCAAAGGGAGTGATGAAAATGTAGATGTAATTCAGCCGGAGGCACCCAGTGTTGAAATTAGTAGTACTGATGCTGGCAACAACAATGTAAGTAAGAGTGAGGAGATCCCAGGAACTTCCAAAAATAAGAAGAAGAATAAGAAAAAGAGCGGAAGAACTGCTCAAGAGGAGGAAGATTTGGACAAACTTCTTGCAGAGCTTGGTGAGGCCCCTCCTGTACCAAAACCTGCAGATGCACCAAAGGATAATAAAGTTCAGCCTACGCCTGAAGTAGTTCCTGTTGCTGATGCTTCAGGGGAAAAGGAGGGTGAAGATGAGACTGTAGAAACAGCTGCTGCAAAGAAGAAGAAGAAGAAAAAGGAAAAGGAGAAGGAGAAGAAGGCAGCTGCGGCAGCAGCAGCTGCTGCAGGGGCTGCACCAGAAAATGAAACAGCAGAAGTTAAAGCTGAGATAACTGAACCAAAGAAGAGTGAGTCAAAGGCTAAAGCAATTGATAAGAAAGTGCCAAAGCATGTAAGGGAGATGCAAGAGGCACTAGCTAGAAGAAAAGAGGCTGAAGAAAGGAAGAAAAGAGAAGAGGAGGAAAAGTTAAGGAAGGAGGAAGAGGAGCGTCGAAGGCAAGAGGAACTTGAGAAACAGGCAGAAGAGGCTAGACGTAGAAAGAAGGAAAGAGAAAAGGAGAAGCTCCAGAAAAAAAAGCAAGAAGGTAAACTGTTAACTGGTAAGCAGAAGGAAGAAGCCCGTCGACTGGAGGCAATGAGGAGGCAGATTCTCAATAACACAGGGGGTATGACTCTCCCTTCTGGAGAATCTGGTCCTCCACCTAAAAAACCCATATATCAGACAAAGAAGGTAAAATCAAATAATCGGAATCAGAATGGTGCTGCTGCTACTCAGACAGCTGAAAGTGTTGAAGCAAAGGAGACTACCACTGATGTAGCTTTGGAGGAACCAGAAAAGGTTGAAGAAGCTGAGTTGATTCAGGCGGATGACAAAGCTGAACTTCCTGTATCTGTTGAAGAGGATGGAGTGGAAGATGATGACGAGGATGAATGGGATGCAAAAAGCTGGGATGATCTTAATCTGAATGCCAAAGGTGCATTTGCTGATGAAGAGGTTGACTCAGAGACTAAACCTATTGTTAAAAAGGAGATTAAAAATGCTGCATCAAGTGCTGCAGGTGTTACTAATAAAACTGTTTCTAAGCATGTGGTTGAAGAAATTGAGAATGGAGGTCAGGATGACTTGAACAGGGAACTTAGAAAGTCTGTCTTGCCAAGGGTACAGCCAAAGTCTGCCATGCCCCCTAAGCCCAGTGAGGAGAACCTCCGCTCGCCAATTTGCTGTATCATGGGTCATGTAGATGCTGGCAAAACCAAGCTGCTGGATTGTATTCGAGGTACTAATGTTCAGGAGGGTGAGGCTGGCGGTATCACACAACAAATTGGTGCAACATACTTTCCTGCGGAGAACATACGAGAGAGAACAAAGGAACTGAAAGCTGATGCAAAGCTGAAAGTTCCTGGTCTACTGGTTATTGATACCCCAGGGCATGAGTCATTTACTAACTTGAGGTCTCGGGGTTCAGGTCTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGGCTACAGCAACAAACAATAGAATCATTAAATCTATTAAAAATGAGGAATACAGAATTCATTGTTGCCTTGAATAAGGTTGACAGGCTTTATGGGTGGAAAACATGTCGCAATGCTCCAATTGTTAAAGCAATGAAGCAACAGAATAAGGATGTTCAACATGAGTTTAATATGAGGCTCACTCAGATCATTACTCAATTCAAAGAACAGGGGCTGAATACTGAGTTGTATTATAAAAACAAAGAAATGGGAGAAACATTCAGCATTGTGCCTGCAAGTGCAATAAGTGGTGAAGGAATTCCTGATTTGTTATTATTGTTGGTTCAATGGACCCAGAAAACAATGGTTGAGAAACTTACATTCAGTGAAGAAGTGCAGTGTACTGTTTTAGAAGTGAAGGTAGTTGAAGGGCATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGAGAACAAATTGTTGTCTGTGGAATGCAGGCAAGGGCCAATTGTTACCACAATTCGAGCTTTATTGACACCTCATCCTATGAAGGAACTACGCGTCAAGTAACTAACAACCGAGCTTCAGCTGTAGTCTATGTGGGAACATATCTTCATCACAAAGAAATCAAAGCTGCAATGGGTATAAAAATCACTGCCCAGGGGCTTGACCACGCCATTGCTGGCACTGGTTTATATGTGGTGAAGTCTGATGATGATTTGGAAGAAGTTAAAGAATCAGCAATGGAAGATATGCAGTCAGTCATGAGCAGGATTGATAGGTCTGGAGAGGGTGTTTGTGTACAGGCATCTACCCTTGGCTCTTTGGAAGCATTACTGGAGTTTTTGAAAACTCCAGAAGTGAGTATCCCTGTTAGTGGTATAAGCATAGGCCCTGTACATAAAAAGGATGTGATGAAGGCCAGTGTAATGCTTGAAAAAAAGAAAGAGTATGCAGTAATATTGGCATTTGATGTCAAGGTTACTCCTGAGGCTAGGGAATTGGCTGATGAATTGGGCGTGAAGATATTTATTGCTGATATCATTTATCATCTGTTCGATCAATTTACAGCTTACATAGGCAACATAAAGGAGGAAAAAAAGAGAGAAGCTGCTGATGAGGCAGTCTTTCCCTGTGTTATGAAAATCTTACCGAATTGCATTTTCAACAAGAAGGACCCAATTGTTTTGGGAGTTGATATCCTTGAAGGCATTTTAAAGATTGGGACTCCAATTTGCATTCCTTCCAGAGAGTTCATTGATATTGGTCGCATTGCCTCCATCGAGAATAACCATAAACCTGTTGACTATGCAAAGAAGGGGCAGAAAGTAGCCATTAAGATTGTTGGTAGCAATTCTGAAGAGCAACAAAAAATGTTTGGGAGGCATTTTGAGATTGATGATGAACTTGTCAGCCATATTTCACGGAGATCTATTGATATACTCAAAGCTAATTATCGGGATGATCTAAATATGGAGGAATGGAGGTTGGTTGTGAAATTGAAGAATCTTTTCAAGATACAATGAGGGGACTTCCTTGATGTGTGGGGCACTCGAGTATTGATTTTGGAGAAGATCAAGGTTTTAGGGCAATGTTTGGTTTTATGCAAGGATGCGGTTGGATCCACCATGGCGACCAGTAAAGATGATTCAATGATTCGAATAGATGGCGCGGTGTCATGGATAGGCAAACACAGGCGAAACTCCAATACTTTGTCAGGTGGAAAGGGTGCGTGCAGAAAGGGAAACTGACAAGCTCCAAATTTTGTGAATTAATATCATATCATATATACACATATCTGTGTTATACACATGGAAGCAAATAAGGGTCTAAATGCAATTCAGTGAGGAAAAACACAATTTTACGGGAGCATTTATTGATTTGACTTAAATTCTCCACTTTTGGTATCCGAGTGTACTTCTGTAACAAATTTCCCCATTTGTAGCTGAGTATCCGGAGGAACGTATCCTTTTGGCGTTTCCTACCCAGCATTTGGTTATGGAAATTGGTAGTATTCAATGGCAAAGGTTCAGCTAAGCCACGTGGACCCAGCTATTTTATGTGCTAAATGTTTCGGCATTTGCAGATTCTTATGCATACACCGTCCCCCTGCAACTTTAATCCCCGCTAATATGTT 5143 0.4301 MGKKKPAARDDENASQQGGGGGKSKKKAVVIDDDEYGIGTELSEEPALVPEEKPAAAGKKKGKKGNAKAKSNDGDIDEDEDVPEVVFSGKKKGKNKKGSGSGVFSASSFGLLGDEGDDDEDKSELTGEEEDEPVVSFSGKKKPSKKGGGSLFSASAFDAIDDDEGGKDDDEDEDEDEPVISFSGKKKSSKGSKKGSGSLFSASAFDDGEVVDDKNDNVDDDEPVIAFTGKKKSSKGGKKGGSVFSAAVLGDIDDGEENKDDAAGDDDDIGPITFSGKKKTSSKKAASKRASVEDDVSVPESGKDVDDKEEDDVSLVVFSGKKKSSKKKGSGTAAKGSDENVDVIQPEAPSVEISSTDAGNNNVSKSEEIPGTSKNKKKNKKKSGRTAQEEEDLDKLLAELGEAPPVPKPADAPKDNKVQPTPEVVPVADASGEKEGEDETVETAAAKKKKKKKEKEKEKKAAAAAAAAAGAAPENETAEVKAEITEPKKSESKAKAIDKKVPKHVREMQEALARRKEAEERKKREEEEKLRKEEEERRRQEELEKQAEEARRRKKEREKEKLQKKKQEGKLLTGKQKEEARRLEAMRRQILNNTGGMTLPSGESGPPPKKPIYQTKKVKSNNRNQNGAAATQTAESVEAKETTTDVALEEPEKVEEAELIQADDKAELPVSVEEDGVEDDDEDEWDAKSWDDLNLNAKGAFADEEVDSETKPIVKKEIKNAASSAAGVTNKTVSKHVVEEIENGGQDDLNRELRKSVLPRVQPKSAMPPKPSEENLRSPICCIMGHVDAGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLQQQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIVKAMKQQNKDVQHEFNMRLTQIITQFKEQGLNTELYYKNKEMGETFSIVPASAISGEGIPDLLLLLVQWTQKTMVEKLTFSEEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGEQIVVCGMQARANCYHNSSFIDTSSYEGTTRQVTNNRASAVVYVGTYLHHKEIKAAMGIKITAQGLDHAIAGTGLYVVKSDDDLEEVKESAMEDMQSVMSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVSIPVSGISIGPVHKKDVMKASVMLEKKKEYAVILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFTAYIGNIKEEKKREAADEAVFPCVMKILPNCIFNKKDPIVLGVDILEGILKIGTPICIPSREFIDIGRIASIENNHKPVDYAKKGQKVAIKIVGSNSEEQQKMFGRHFEIDDELVSHISRRSIDILKANYRDDLNMEEWRLVVKLKNLFKIQ 1381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02637 1381 FunFam Eukaryotic translation initiation factor 5B 1244 1381 - -
Pste4g02637 1381 MobiDBLite consensus disorder prediction 349 369 - -
Pste4g02637 1381 CDD IF2_eIF5B 779 989 - -
Pste4g02637 1381 Pfam Translation-initiation factor 2 1116 1229 IPR023115 -
Pste4g02637 1381 NCBIfam small GTP-binding protein domain 781 906 IPR005225 GO:0005525
Pste4g02637 1381 MobiDBLite consensus disorder prediction 162 178 - -
Pste4g02637 1381 MobiDBLite consensus disorder prediction 113 131 - -
Pste4g02637 1381 MobiDBLite consensus disorder prediction 642 672 - -
Pste4g02637 1381 Gene3D - 770 998 IPR027417 -
Pste4g02637 1381 MobiDBLite consensus disorder prediction 673 688 - -
Pste4g02637 1381 Gene3D Translation factors 1244 1381 - -
Pste4g02637 1381 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 776 992 IPR000795 GO:0003924|GO:0005525
Pste4g02637 1381 PRINTS GTP-binding elongation factor signature 860 871 IPR000795 GO:0003924|GO:0005525
Pste4g02637 1381 PRINTS GTP-binding elongation factor signature 896 905 IPR000795 GO:0003924|GO:0005525
Pste4g02637 1381 PRINTS GTP-binding elongation factor signature 780 793 IPR000795 GO:0003924|GO:0005525
Pste4g02637 1381 PRINTS GTP-binding elongation factor signature 844 854 IPR000795 GO:0003924|GO:0005525
Pste4g02637 1381 MobiDBLite consensus disorder prediction 430 449 - -
Pste4g02637 1381 SUPERFAMILY Translation proteins 1248 1380 IPR009000 -
Pste4g02637 1381 MobiDBLite consensus disorder prediction 479 586 - -
Pste4g02637 1381 CDD IF2_aeIF5B_IV 1252 1347 - -
Pste4g02637 1381 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1114 1243 IPR036925 -
Pste4g02637 1381 MobiDBLite consensus disorder prediction 286 317 - -
Pste4g02637 1381 Pfam Elongation factor Tu GTP binding domain 780 988 IPR000795 GO:0003924|GO:0005525
Pste4g02637 1381 Coils Coil 501 572 - -
Pste4g02637 1381 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 777 1043 IPR027417 -
Pste4g02637 1381 MobiDBLite consensus disorder prediction 1 691 - -
Pste4g02637 1381 Gene3D Translation factors 999 1132 - -
Pste4g02637 1381 FunFam Eukaryotic translation initiation factor 5B 770 998 - -
Pste4g02637 1381 Coils Coil 441 466 - -
Pste4g02637 1381 MobiDBLite consensus disorder prediction 383 398 - -
Pste4g02637 1381 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 481 1377 IPR015760 -
Pste4g02637 1381 Gene3D - 1133 1236 IPR036925 -
Pste4g02637 1381 FunFam Eukaryotic translation initiation factor 5B 1131 1237 - -
Pste4g02637 1381 MobiDBLite consensus disorder prediction 615 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02637 Pste-Chr4 18608711 18619998 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02637 1 227 Eukaryotic Initiation Factors Gene Family AT1G76810 42.339 1.72e-06 50.8